RNA–Protein interactions for RNA: ENST00000533222.5

CD44-236, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-236ENST00000533222 RFX2P48378 723 aa5.11□□□□□ -1.59
CD44-236ENST00000533222 KHKP50053 298 aa5.11□□□□□ -1.59
CD44-236ENST00000533222 CCR6P51684 374 aa5.11□□□□□ -1.59
CD44-236ENST00000533222 ARSEP51690 589 aa5.11□□□□□ -1.59
CD44-236ENST00000533222 METAP1P53582 386 aa5.11□□□□□ -1.59
CD44-236ENST00000533222 SOX10P56693 466 aa5.11□□□□□ -1.59
CD44-236ENST00000533222 CLDN20P56880 219 aa5.11□□□□□ -1.59
CD44-236ENST00000533222 TAS2R39P59534 338 aa5.11□□□□□ -1.59
CD44-236ENST00000533222 MRPS10P82664 201 aaKnown RBP5.11□□□□□ -1.59
CD44-236ENST00000533222 MC2RQ01718 297 aa5.11□□□□□ -1.59
CD44-236ENST00000533222 TLE2Q04725 743 aa5.11□□□□□ -1.59
CD44-236ENST00000533222 SLAMF1Q13291 335 aa5.11□□□□□ -1.59
CD44-236ENST00000533222 ENPP2Q13822 863 aa5.11□□□□□ -1.59
CD44-236ENST00000533222 PTK6Q13882 451 aa5.11□□□□□ -1.59
CD44-236ENST00000533222 VEZF1Q14119 521 aa5.11□□□□□ -1.59
CD44-236ENST00000533222 MESDQ14696 234 aa5.11□□□□□ -1.59
CD44-236ENST00000533222 SHHQ15465 462 aa5.11□□□□□ -1.59
CD44-236ENST00000533222 TRAM1Q15629 374 aa5.11□□□□□ -1.59
CD44-236ENST00000533222 ATP6AP1Q15904 470 aa5.11□□□□□ -1.59
CD44-236ENST00000533222 RAB11BQ15907 218 aa5.11□□□□□ -1.59
CD44-236ENST00000533222 EXOC3L2Q2M3D2 409 aa5.11□□□□□ -1.59
CD44-236ENST00000533222 BCL7AQ4VC05 210 aa5.11□□□□□ -1.59
CD44-236ENST00000533222 C9orf152Q5JTZ5 239 aa5.11□□□□□ -1.59
CD44-236ENST00000533222 PCID2Q5JVF3 399 aa5.11□□□□□ -1.59
CD44-236ENST00000533222 HIST2H3PS2Q5TEC6 136 aa5.11□□□□□ -1.59
CD44-236ENST00000533222 NXNL2Q5VZ03 156 aa5.11□□□□□ -1.59
CD44-236ENST00000533222 EIF5AL1Q6IS14 154 aaKnown RBP5.11□□□□□ -1.59
CD44-236ENST00000533222 FBXO42Q6P3S6 717 aa5.11□□□□□ -1.59
CD44-236ENST00000533222 FBXO46Q6PJ61 603 aaPredicted RBP5.11□□□□□ -1.59
CD44-236ENST00000533222 HACD2Q6Y1H2 254 aa5.11□□□□□ -1.59
CD44-236ENST00000533222 GDPGP1Q6ZNW5 385 aa5.11□□□□□ -1.59
CD44-236ENST00000533222 VTCN1Q7Z7D3 282 aa5.11□□□□□ -1.59
CD44-236ENST00000533222 TMEM135Q86UB9 458 aa5.11□□□□□ -1.59
CD44-236ENST00000533222 OAFQ86UD1 273 aa5.11□□□□□ -1.59
CD44-236ENST00000533222 PLD3Q8IV08 490 aa5.11□□□□□ -1.59
CD44-236ENST00000533222 DEFB107AQ8IZN7 70 aa5.11□□□□□ -1.59
CD44-236ENST00000533222 FAM58AQ8N1B3 248 aa5.11□□□□□ -1.59
CD44-236ENST00000533222 TMEM132CQ8N3T6 1108 aa5.11□□□□□ -1.59
CD44-236ENST00000533222 FBXO39Q8N4B4 442 aa5.11□□□□□ -1.59
CD44-236ENST00000533222 MINDY1Q8N5J2 469 aa5.11□□□□□ -1.59
CD44-236ENST00000533222 MS4A15Q8N5U1 240 aa5.11□□□□□ -1.59
CD44-236ENST00000533222 CCDC71LQ8N9Z2 235 aa5.11□□□□□ -1.59
CD44-236ENST00000533222 ZNF383Q8NA42 475 aa5.11□□□□□ -1.59
CD44-236ENST00000533222 STEAP2Q8NFT2 490 aa5.11□□□□□ -1.59
CD44-236ENST00000533222 OR6J1Q8NGC5 347 aa5.11□□□□□ -1.59
CD44-236ENST00000533222 OR5B17Q8NGF7 314 aa5.11□□□□□ -1.59
CD44-236ENST00000533222 OR5M8Q8NGP6 311 aa5.11□□□□□ -1.59
CD44-236ENST00000533222 OR2T11Q8NH01 316 aa5.11□□□□□ -1.59
CD44-236ENST00000533222 OR14A16Q8NHC5 309 aa5.11□□□□□ -1.59
CD44-236ENST00000533222 BIRC7Q96CA5 298 aa5.11□□□□□ -1.59
CD44-236ENST00000533222 ZNF503Q96F45 646 aa5.11□□□□□ -1.59
CD44-236ENST00000533222 CENPNQ96H22 339 aaPredicted RBP5.11□□□□□ -1.59
CD44-236ENST00000533222 TMEM19Q96HH6 336 aa5.11□□□□□ -1.59
CD44-236ENST00000533222 SLC41A2Q96JW4 573 aa5.11□□□□□ -1.59
CD44-236ENST00000533222 LRR1Q96L50 414 aa5.11□□□□□ -1.59
CD44-236ENST00000533222 PACRGQ96M98 296 aaPredicted RBP5.11□□□□□ -1.59
CD44-236ENST00000533222 GFM1Q96RP9 751 aaKnown RBP5.11□□□□□ -1.59
CD44-236ENST00000533222 PHB2Q99623 299 aa5.11□□□□□ -1.59
CD44-236ENST00000533222 SMOQ99835 787 aa5.11□□□□□ -1.59
CD44-236ENST00000533222 SLC30A2Q9BRI3 323 aa5.11□□□□□ -1.59
CD44-236ENST00000533222 THAP7Q9BT49 309 aaPredicted RBP5.11□□□□□ -1.59
CD44-236ENST00000533222 ACTR6Q9GZN1 396 aa5.11□□□□□ -1.59
CD44-236ENST00000533222 CHST5Q9GZS9 411 aa5.11□□□□□ -1.59
CD44-236ENST00000533222 MFFQ9GZY8 342 aa5.11□□□□□ -1.59
CD44-236ENST00000533222 PIGMQ9H3S5 423 aa5.11□□□□□ -1.59
CD44-236ENST00000533222 ZNF703Q9H7S9 590 aaPredicted RBP5.11□□□□□ -1.59
CD44-236ENST00000533222 IL21RQ9HBE5 538 aa5.11□□□□□ -1.59
CD44-236ENST00000533222 NRIP3Q9NQ35 241 aa5.11□□□□□ -1.59
CD44-236ENST00000533222 FBXO6Q9NRD1 293 aaPredicted RBP5.11□□□□□ -1.59
CD44-236ENST00000533222 SLC2A9Q9NRM0 540 aa5.11□□□□□ -1.59
CD44-236ENST00000533222 SPANXA1Q9NS26 97 aa5.11□□□□□ -1.59
CD44-236ENST00000533222 C14orf105Q9NVL8 296 aa5.11□□□□□ -1.59
CD44-236ENST00000533222 SOHLH2Q9NX45 425 aa5.11□□□□□ -1.59
CD44-236ENST00000533222 SCN3BQ9NY72 215 aa5.11□□□□□ -1.59
CD44-236ENST00000533222 RASL12Q9NYN1 266 aa5.11□□□□□ -1.59
CD44-236ENST00000533222 HAO2Q9NYQ3 351 aa5.11□□□□□ -1.59
CD44-236ENST00000533222 USE1Q9NZ43 259 aa5.11□□□□□ -1.59
CD44-236ENST00000533222 PDP1Q9P0J1 537 aaPredicted RBP5.11□□□□□ -1.59
CD44-236ENST00000533222 GCNT4Q9P109 453 aa5.11□□□□□ -1.59
CD44-236ENST00000533222 OPTCQ9UBM4 332 aa5.11□□□□□ -1.59
CD44-236ENST00000533222 NUFIP1Q9UHK0 495 aaKnown RBP5.11□□□□□ -1.59
CD44-236ENST00000533222 DNPEPQ9ULA0 475 aa5.11□□□□□ -1.59
CD44-236ENST00000533222 RNF24Q9Y225 148 aa5.11□□□□□ -1.59
CD44-236ENST00000533222 CCL27Q9Y4X3 112 aa5.11□□□□□ -1.59
CD44-236ENST00000533222 INSL6Q9Y581 213 aa5.11□□□□□ -1.59
CD44-236ENST00000533222 NPTNQ9Y639 398 aa5.11□□□□□ -1.59
CD44-236ENST00000533222 V9GYS6 101 aa5.11□□□□□ -1.59
CD44-236ENST00000533222 SLIT1O75093 1534 aa5.11□□□□□ -1.59
CD44-236ENST00000533222 SETBP1Q9Y6X0 1596 aa5.11□□□□□ -1.59
CD44-236ENST00000533222 A0A087X1B8 175 aa5.1□□□□□ -1.59
CD44-236ENST00000533222 MEX3AA1L020 520 aaKnown RBP5.1□□□□□ -1.59
CD44-236ENST00000533222 UNC119BA6NIH7 251 aa5.1□□□□□ -1.59
CD44-236ENST00000533222 GJE1A6NN92 205 aa5.1□□□□□ -1.59
CD44-236ENST00000533222 ERI2A8K979 691 aaKnown RBP5.1□□□□□ -1.59
CD44-236ENST00000533222 TMX2-CTNND1H3BSU7 103 aa5.1□□□□□ -1.59
CD44-236ENST00000533222 RPL36A-HNRNPH2H7BZ11 118 aa5.1□□□□□ -1.59
CD44-236ENST00000533222 DLGAP1O14490 977 aa5.1□□□□□ -1.59
CD44-236ENST00000533222 ADAMTS3O15072 1205 aa5.1□□□□□ -1.59
CD44-236ENST00000533222 SMAD9O15198 467 aaKnown RBP5.1□□□□□ -1.59
CD44-236ENST00000533222 XPNPEP2O43895 674 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms