RNA–Protein interactions for RNA: ENST00000531042.5

CPSF1-205, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-205ENST00000531042 BHLHE41Q9C0J9 482 aaPredicted RBP14.09□□□□□ -0.15
CPSF1-205ENST00000531042 NSD1Q96L73 2696 aaPredicted RBP14.09□□□□□ -0.15
CPSF1-205ENST00000531042 NAV3Q8IVL0 2385 aa14.09□□□□□ -0.15
CPSF1-205ENST00000531042 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP14.08□□□□□ -0.16
CPSF1-205ENST00000531042 H3BNH8 94 aa14.08□□□□□ -0.16
CPSF1-205ENST00000531042 ZNF195O14628 629 aa14.08□□□□□ -0.16
CPSF1-205ENST00000531042 CFLARO15519 480 aa14.08□□□□□ -0.16
CPSF1-205ENST00000531042 TYROBPO43914 113 aa14.08□□□□□ -0.16
CPSF1-205ENST00000531042 PABPC4LP0CB38 370 aaKnown RBP14.08□□□□□ -0.16
CPSF1-205ENST00000531042 ETV4P43268 484 aa14.08□□□□□ -0.16
CPSF1-205ENST00000531042 TOMM34Q15785 309 aaPredicted RBP14.08□□□□□ -0.16
CPSF1-205ENST00000531042 ZNF239Q16600 458 aaKnown RBP14.08□□□□□ -0.16
CPSF1-205ENST00000531042 Q71RC1 249 aaPredicted RBP14.08□□□□□ -0.16
CPSF1-205ENST00000531042 GPR119Q8TDV5 335 aa14.08□□□□□ -0.16
CPSF1-205ENST00000531042 RNF128Q8TEB7 428 aa14.08□□□□□ -0.16
CPSF1-205ENST00000531042 CPNE4Q96A23 557 aaPredicted RBP14.08□□□□□ -0.16
CPSF1-205ENST00000531042 TUBGCP3Q96CW5 907 aa14.08□□□□□ -0.16
CPSF1-205ENST00000531042 REXO5Q96IC2 774 aaKnown RBP14.08□□□□□ -0.16
CPSF1-205ENST00000531042 OR7D2Q96RA2 312 aa14.08□□□□□ -0.16
CPSF1-205ENST00000531042 DUSP26Q9BV47 211 aa14.08□□□□□ -0.16
CPSF1-205ENST00000531042 SRXN1Q9BYN0 137 aa14.08□□□□□ -0.16
CPSF1-205ENST00000531042 ACTR6Q9GZN1 396 aa14.08□□□□□ -0.16
CPSF1-205ENST00000531042 OR10A4Q9H209 315 aa14.08□□□□□ -0.16
CPSF1-205ENST00000531042 C12orf49Q9H741 205 aa14.08□□□□□ -0.16
CPSF1-205ENST00000531042 ZNF395Q9H8N7 513 aaPredicted RBP14.08□□□□□ -0.16
CPSF1-205ENST00000531042 TIGARQ9NQ88 270 aa14.08□□□□□ -0.16
CPSF1-205ENST00000531042 GPR52Q9Y2T5 361 aa14.08□□□□□ -0.16
CPSF1-205ENST00000531042 DTNAQ9Y4J8 743 aa14.08□□□□□ -0.16
CPSF1-205ENST00000531042 GPC6Q9Y625 555 aaPredicted RBP14.08□□□□□ -0.16
CPSF1-205ENST00000531042 ARID1AO14497 2285 aa14.08□□□□□ -0.16
CPSF1-205ENST00000531042 GJE1A6NN92 205 aa14.07□□□□□ -0.16
CPSF1-205ENST00000531042 GTPBP1O00178 669 aaKnown RBP14.07□□□□□ -0.16
CPSF1-205ENST00000531042 G6PDP11413 515 aa14.07□□□□□ -0.16
CPSF1-205ENST00000531042 PRKCAP17252 672 aa14.07□□□□□ -0.16
CPSF1-205ENST00000531042 PSMB1P20618 241 aaKnown RBP14.07□□□□□ -0.16
CPSF1-205ENST00000531042 CLDN8P56748 225 aa14.07□□□□□ -0.16
CPSF1-205ENST00000531042 C21orf58P58505 322 aa14.07□□□□□ -0.16
CPSF1-205ENST00000531042 HBA1P69905 142 aa14.07□□□□□ -0.16
CPSF1-205ENST00000531042 EMX2Q04743 252 aa14.07□□□□□ -0.16
CPSF1-205ENST00000531042 MAD2L1Q13257 205 aaPredicted RBP14.07□□□□□ -0.16
CPSF1-205ENST00000531042 RNPS1Q15287 305 aaKnown RBP14.07□□□□□ -0.16
CPSF1-205ENST00000531042 NDUFAF6Q330K2 333 aa14.07□□□□□ -0.16
CPSF1-205ENST00000531042 CLEC9AQ6UXN8 241 aa14.07□□□□□ -0.16
CPSF1-205ENST00000531042 PLEKHM3Q6ZWE6 761 aa14.07□□□□□ -0.16
CPSF1-205ENST00000531042 OR5D16Q8NGK9 328 aa14.07□□□□□ -0.16
CPSF1-205ENST00000531042 OR5AK3PQ8NH89 298 aa14.07□□□□□ -0.16
CPSF1-205ENST00000531042 AENQ8WTP8 325 aaKnown RBP14.07□□□□□ -0.16
CPSF1-205ENST00000531042 ABHD3Q8WU67 409 aa14.07□□□□□ -0.16
CPSF1-205ENST00000531042 IGFBPL1Q8WX77 278 aa14.07□□□□□ -0.16
CPSF1-205ENST00000531042 ZNF524Q96C55 264 aa14.07□□□□□ -0.16
CPSF1-205ENST00000531042 PERPQ96FX8 193 aa14.07□□□□□ -0.16
CPSF1-205ENST00000531042 SDF2Q99470 211 aa14.07□□□□□ -0.16
CPSF1-205ENST00000531042 ESPNB1AK53 854 aa14.06□□□□□ -0.16
CPSF1-205ENST00000531042 ZNF264O43296 627 aa14.06□□□□□ -0.16
CPSF1-205ENST00000531042 EIF4E2O60573 245 aaKnown RBP14.06□□□□□ -0.16
CPSF1-205ENST00000531042 NTN1O95631 604 aa14.06□□□□□ -0.16
CPSF1-205ENST00000531042 PLAUP00749 431 aa14.06□□□□□ -0.16
CPSF1-205ENST00000531042 SOAT1P35610 550 aa14.06□□□□□ -0.16
CPSF1-205ENST00000531042 NR1H2P55055 460 aa14.06□□□□□ -0.16
CPSF1-205ENST00000531042 SMU1Q2TAY7 513 aa14.06□□□□□ -0.16
CPSF1-205ENST00000531042 PGS1Q32NB8 556 aa14.06□□□□□ -0.16
CPSF1-205ENST00000531042 TMEM176BQ3YBM2 270 aaPredicted RBP14.06□□□□□ -0.16
CPSF1-205ENST00000531042 SLC25A53Q5H9E4 307 aa14.06□□□□□ -0.16
CPSF1-205ENST00000531042 TMEM201Q5SNT2 666 aa14.06□□□□□ -0.16
CPSF1-205ENST00000531042 BHLHB9Q6PI77 547 aa14.06□□□□□ -0.16
CPSF1-205ENST00000531042 ZNF704Q6ZNC4 412 aaPredicted RBP14.06□□□□□ -0.16
CPSF1-205ENST00000531042 NUFIP2Q7Z417 695 aaKnown RBP14.06□□□□□ -0.16
CPSF1-205ENST00000531042 YTHDF3Q7Z739 585 aaKnown RBP14.06□□□□□ -0.16
CPSF1-205ENST00000531042 WFDC8Q8IUA0 241 aa14.06□□□□□ -0.16
CPSF1-205ENST00000531042 NUDCD3Q8IVD9 361 aa14.06□□□□□ -0.16
CPSF1-205ENST00000531042 TUSC5Q8IXB3 177 aa14.06□□□□□ -0.16
CPSF1-205ENST00000531042 CIARTQ8N365 385 aaPredicted RBP14.06□□□□□ -0.16
CPSF1-205ENST00000531042 ZNF614Q8N883 585 aa14.06□□□□□ -0.16
CPSF1-205ENST00000531042 ZFP90Q8TF47 636 aa14.06□□□□□ -0.16
CPSF1-205ENST00000531042 PLPPR2Q96GM1 343 aa14.06□□□□□ -0.16
CPSF1-205ENST00000531042 COX4I2Q96KJ9 171 aa14.06□□□□□ -0.16
CPSF1-205ENST00000531042 MRGPRX4Q96LA9 322 aa14.06□□□□□ -0.16
CPSF1-205ENST00000531042 Q96MF0 132 aa14.06□□□□□ -0.16
CPSF1-205ENST00000531042 GSX2Q9BZM3 304 aa14.06□□□□□ -0.16
CPSF1-205ENST00000531042 COQ10BQ9H8M1 238 aa14.06□□□□□ -0.16
CPSF1-205ENST00000531042 GP6Q9HCN6 339 aa14.06□□□□□ -0.16
CPSF1-205ENST00000531042 ASIC5Q9NY37 505 aa14.06□□□□□ -0.16
CPSF1-205ENST00000531042 NOP53Q9NZM5 478 aaKnown RBP14.06□□□□□ -0.16
CPSF1-205ENST00000531042 KLHL13Q9P2N7 655 aa14.06□□□□□ -0.16
CPSF1-205ENST00000531042 FAM171A2A8MVW0 826 aa14.05□□□□□ -0.16
CPSF1-205ENST00000531042 H7C1Q1 480 aa14.05□□□□□ -0.16
CPSF1-205ENST00000531042 ITM2AO43736 263 aa14.05□□□□□ -0.16
CPSF1-205ENST00000531042 GCM2O75603 506 aaPredicted RBP14.05□□□□□ -0.16
CPSF1-205ENST00000531042 PRKD3O94806 890 aa14.05□□□□□ -0.16
CPSF1-205ENST00000531042 HEXAP06865 529 aa14.05□□□□□ -0.16
CPSF1-205ENST00000531042 UBL4AP11441 157 aa14.05□□□□□ -0.16
CPSF1-205ENST00000531042 MATN1P21941 496 aa14.05□□□□□ -0.16
CPSF1-205ENST00000531042 RPS26P62854 115 aaKnown RBP14.05□□□□□ -0.16
CPSF1-205ENST00000531042 ZNF844Q08AG5 666 aa14.05□□□□□ -0.16
CPSF1-205ENST00000531042 PDZK1Q5T2W1 519 aa14.05□□□□□ -0.16
CPSF1-205ENST00000531042 EMBQ6PCB8 327 aa14.05□□□□□ -0.16
CPSF1-205ENST00000531042 TFAP2EQ6VUC0 442 aa14.05□□□□□ -0.16
CPSF1-205ENST00000531042 FCRLAQ7L513 359 aa14.05□□□□□ -0.16
CPSF1-205ENST00000531042 C6orf120Q7Z4R8 191 aa14.05□□□□□ -0.16
CPSF1-205ENST00000531042 CLECL1Q8IZS7 167 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms