RNA–Protein interactions for RNA: ENST00000530893.6

BRCA2-204, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA2, Length 2,011 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-204ENST00000530893 TRIM2Q9C040 744 aa15.93■□□□□ 0.14
BRCA2-204ENST00000530893 ATP13A2Q9NQ11 1180 aa15.93■□□□□ 0.14
BRCA2-204ENST00000530893 GPR27Q9NS67 375 aa15.93■□□□□ 0.14
BRCA2-204ENST00000530893 SLC35A3Q9Y2D2 325 aa15.93■□□□□ 0.14
BRCA2-204ENST00000530893 RANBP2P49792 3224 aaKnown RBP15.93■□□□□ 0.14
BRCA2-204ENST00000530893 NPIPA5A0A0B4J1W7 369 aa15.92■□□□□ 0.14
BRCA2-204ENST00000530893 GXYLT2A0PJZ3 443 aa15.92■□□□□ 0.14
BRCA2-204ENST00000530893 PRR23D1E9PI22 279 aaPredicted RBP15.92■□□□□ 0.14
BRCA2-204ENST00000530893 NPIPA7E9PJI5 369 aa15.92■□□□□ 0.14
BRCA2-204ENST00000530893 SGK494L7N484 410 aa15.92■□□□□ 0.14
BRCA2-204ENST00000530893 SSX4O60224 188 aa15.92■□□□□ 0.14
BRCA2-204ENST00000530893 CSF3P09919 207 aa15.92■□□□□ 0.14
BRCA2-204ENST00000530893 NPIPA8P0DM63 369 aa15.92■□□□□ 0.14
BRCA2-204ENST00000530893 PRR23D2P0DMB1 279 aaPredicted RBP15.92■□□□□ 0.14
BRCA2-204ENST00000530893 SAGP10523 405 aaPredicted RBP15.92■□□□□ 0.14
BRCA2-204ENST00000530893 BLKP51451 505 aa15.92■□□□□ 0.14
BRCA2-204ENST00000530893 GALEQ14376 348 aa15.92■□□□□ 0.14
BRCA2-204ENST00000530893 TRAM1Q15629 374 aa15.92■□□□□ 0.14
BRCA2-204ENST00000530893 VASNQ6EMK4 673 aa15.92■□□□□ 0.14
BRCA2-204ENST00000530893 GPALPP1Q8IXQ4 340 aa15.92■□□□□ 0.14
BRCA2-204ENST00000530893 ARHGEF39Q8N4T4 335 aa15.92■□□□□ 0.14
BRCA2-204ENST00000530893 LSMEM1Q8N8F7 131 aa15.92■□□□□ 0.14
BRCA2-204ENST00000530893 SCAIQ8N9R8 606 aa15.92■□□□□ 0.14
BRCA2-204ENST00000530893 ACOT12Q8WYK0 555 aa15.92■□□□□ 0.14
BRCA2-204ENST00000530893 OTULINQ96BN8 352 aa15.92■□□□□ 0.14
BRCA2-204ENST00000530893 SOSTQ9BQB4 213 aa15.92■□□□□ 0.14
BRCA2-204ENST00000530893 ALG8Q9BVK2 526 aa15.92■□□□□ 0.14
BRCA2-204ENST00000530893 IFT27Q9BW83 186 aa15.92■□□□□ 0.14
BRCA2-204ENST00000530893 TCEAL2Q9H3H9 227 aaPredicted RBP15.92■□□□□ 0.14
BRCA2-204ENST00000530893 TRIM36Q9NQ86 728 aa15.92■□□□□ 0.14
BRCA2-204ENST00000530893 CD207Q9UJ71 328 aa15.92■□□□□ 0.14
BRCA2-204ENST00000530893 ADAM30Q9UKF2 790 aa15.92■□□□□ 0.14
BRCA2-204ENST00000530893 RIIAD1A6NNX1 92 aa15.92■□□□□ 0.14
BRCA2-204ENST00000530893 LRRTM2O43300 516 aa15.92■□□□□ 0.14
BRCA2-204ENST00000530893 PTP4A3O75365 173 aa15.92■□□□□ 0.14
BRCA2-204ENST00000530893 RDH16O75452 317 aa15.92■□□□□ 0.14
BRCA2-204ENST00000530893 CCNKO75909 580 aa15.92■□□□□ 0.14
BRCA2-204ENST00000530893 RGS9O75916 674 aaPredicted RBP15.92■□□□□ 0.14
BRCA2-204ENST00000530893 CTSEP14091 401 aa15.92■□□□□ 0.14
BRCA2-204ENST00000530893 GLULP15104 373 aa15.92■□□□□ 0.14
BRCA2-204ENST00000530893 PSG6Q00889 435 aa15.92■□□□□ 0.14
BRCA2-204ENST00000530893 RIN1Q13671 783 aa15.92■□□□□ 0.14
BRCA2-204ENST00000530893 CCINQ13939 588 aa15.92■□□□□ 0.14
BRCA2-204ENST00000530893 CARTPTQ16568 116 aa15.92■□□□□ 0.14
BRCA2-204ENST00000530893 SPATC1Q76KD6 591 aa15.92■□□□□ 0.14
BRCA2-204ENST00000530893 SLC37A3Q8NCC5 494 aa15.92■□□□□ 0.14
BRCA2-204ENST00000530893 OR4C6Q8NH72 309 aa15.92■□□□□ 0.14
BRCA2-204ENST00000530893 SLC2A12Q8TD20 617 aa15.92■□□□□ 0.14
BRCA2-204ENST00000530893 ADAMTS18Q8TE60 1221 aa15.92■□□□□ 0.14
BRCA2-204ENST00000530893 HMGB4Q8WW32 186 aa15.92■□□□□ 0.14
BRCA2-204ENST00000530893 KISS1RQ969F8 398 aaPredicted RBP15.92■□□□□ 0.14
BRCA2-204ENST00000530893 LRFN5Q96NI6 719 aa15.92■□□□□ 0.14
BRCA2-204ENST00000530893 ATF6BQ99941 703 aa15.92■□□□□ 0.14
BRCA2-204ENST00000530893 HAO2Q9NYQ3 351 aa15.92■□□□□ 0.14
BRCA2-204ENST00000530893 MRPS33Q9Y291 106 aaKnown RBP15.92■□□□□ 0.14
BRCA2-204ENST00000530893 SCN2AQ99250 2005 aa15.92■□□□□ 0.14
BRCA2-204ENST00000530893 DAPL1A0PJW8 107 aa15.91■□□□□ 0.14
BRCA2-204ENST00000530893 RNF13O43567 381 aa15.91■□□□□ 0.14
BRCA2-204ENST00000530893 SRPX2O60687 465 aaPredicted RBP15.91■□□□□ 0.14
BRCA2-204ENST00000530893 HLA-DQB1P01920 261 aa15.91■□□□□ 0.14
BRCA2-204ENST00000530893 TRAPPC2P0DI81 140 aa15.91■□□□□ 0.14
BRCA2-204ENST00000530893 TRAPPC2BP0DI82 140 aa15.91■□□□□ 0.14
BRCA2-204ENST00000530893 S1PR1P21453 382 aa15.91■□□□□ 0.14
BRCA2-204ENST00000530893 F8A1P23610 371 aa15.91■□□□□ 0.14
BRCA2-204ENST00000530893 MTNR1BP49286 362 aa15.91■□□□□ 0.14
BRCA2-204ENST00000530893 TAS2R43P59537 309 aa15.91■□□□□ 0.14
BRCA2-204ENST00000530893 PLAURQ03405 335 aa15.91■□□□□ 0.14
BRCA2-204ENST00000530893 PYDC2Q56P42 97 aa15.91■□□□□ 0.14
BRCA2-204ENST00000530893 RTL4Q6ZR62 310 aa15.91■□□□□ 0.14
BRCA2-204ENST00000530893 FAM174AQ8TBP5 190 aa15.91■□□□□ 0.14
BRCA2-204ENST00000530893 DOK4Q8TEW6 326 aa15.91■□□□□ 0.14
BRCA2-204ENST00000530893 NACC2Q96BF6 587 aa15.91■□□□□ 0.14
BRCA2-204ENST00000530893 TEAD3Q99594 435 aa15.91■□□□□ 0.14
BRCA2-204ENST00000530893 HOXD1Q9GZZ0 328 aa15.91■□□□□ 0.14
BRCA2-204ENST00000530893 MEPEQ9NQ76 525 aaPredicted RBP15.91■□□□□ 0.14
BRCA2-204ENST00000530893 ST6GALNAC1Q9NSC7 600 aaPredicted RBP15.91■□□□□ 0.14
BRCA2-204ENST00000530893 GTPBP1O00178 669 aaKnown RBP15.9■□□□□ 0.14
BRCA2-204ENST00000530893 THEGLP0DJG4 465 aa15.9■□□□□ 0.14
BRCA2-204ENST00000530893 ST6GAL1P15907 406 aa15.9■□□□□ 0.14
BRCA2-204ENST00000530893 ZNF3P17036 446 aa15.9■□□□□ 0.14
BRCA2-204ENST00000530893 POU4F2Q12837 409 aa15.9■□□□□ 0.14
BRCA2-204ENST00000530893 FZD2Q14332 565 aa15.9■□□□□ 0.14
BRCA2-204ENST00000530893 SLC35F1Q5T1Q4 408 aa15.9■□□□□ 0.14
BRCA2-204ENST00000530893 C19orf47Q8N9M1 422 aaKnown RBP15.9■□□□□ 0.14
BRCA2-204ENST00000530893 OR13C2Q8NGS9 318 aa15.9■□□□□ 0.14
BRCA2-204ENST00000530893 OR9A4Q8NGU2 314 aa15.9■□□□□ 0.14
BRCA2-204ENST00000530893 CNOT9Q92600 299 aaKnown RBP15.9■□□□□ 0.14
BRCA2-204ENST00000530893 PTP4A1Q93096 173 aa15.9■□□□□ 0.14
BRCA2-204ENST00000530893 AHCYL2Q96HN2 611 aaKnown RBP15.9■□□□□ 0.14
BRCA2-204ENST00000530893 ENKD1Q9H0I2 346 aa15.9■□□□□ 0.14
BRCA2-204ENST00000530893 PPP1R3EQ9H7J1 279 aa15.9■□□□□ 0.14
BRCA2-204ENST00000530893 ISG20L2Q9H9L3 353 aaKnown RBP15.9■□□□□ 0.14
BRCA2-204ENST00000530893 FOLH1BQ9HBA9 442 aa15.9■□□□□ 0.14
BRCA2-204ENST00000530893 FAM60AQ9NP50 221 aa15.9■□□□□ 0.14
BRCA2-204ENST00000530893 COMMD3Q9UBI1 195 aa15.9■□□□□ 0.14
BRCA2-204ENST00000530893 XIRP2A4UGR9 3374 aa15.9■□□□□ 0.14
BRCA2-204ENST00000530893 A0A1B0GWA3 101 aa15.9■□□□□ 0.14
BRCA2-204ENST00000530893 SLC19A2O60779 497 aa15.9■□□□□ 0.14
BRCA2-204ENST00000530893 MT-ND5P03915 603 aa15.9■□□□□ 0.14
BRCA2-204ENST00000530893 KRT8P05787 483 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms