RNA–Protein interactions for RNA: ENST00000528364.1

CLNS1A-210, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

APPRIS P1 TSL 3 BASIC

Gene CLNS1A, Length 953 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-210ENST00000528364 TMEM114B3SHH9 223 aa13.83□□□□□ -0.2
CLNS1A-210ENST00000528364 GTPBP1O00178 669 aaKnown RBP13.83□□□□□ -0.2
CLNS1A-210ENST00000528364 GCM2O75603 506 aaPredicted RBP13.83□□□□□ -0.2
CLNS1A-210ENST00000528364 CNOT4O95628 575 aaKnown RBP13.83□□□□□ -0.2
CLNS1A-210ENST00000528364 NUDT14O95848 222 aa13.83□□□□□ -0.2
CLNS1A-210ENST00000528364 TUBBP07437 444 aa13.83□□□□□ -0.2
CLNS1A-210ENST00000528364 ATP6V1C1P21283 382 aa13.83□□□□□ -0.2
CLNS1A-210ENST00000528364 ENPP1P22413 925 aa13.83□□□□□ -0.2
CLNS1A-210ENST00000528364 NR1H2P55055 460 aa13.83□□□□□ -0.2
CLNS1A-210ENST00000528364 ZNF239Q16600 458 aaKnown RBP13.83□□□□□ -0.2
CLNS1A-210ENST00000528364 SPDYE7PQ495Y7 208 aa13.83□□□□□ -0.2
CLNS1A-210ENST00000528364 DCST2Q5T1A1 773 aa13.83□□□□□ -0.2
CLNS1A-210ENST00000528364 CLEC4FQ8N1N0 589 aa13.83□□□□□ -0.2
CLNS1A-210ENST00000528364 ZNF619Q8N2I2 560 aa13.83□□□□□ -0.2
CLNS1A-210ENST00000528364 OR5AK3PQ8NH89 298 aa13.83□□□□□ -0.2
CLNS1A-210ENST00000528364 LILRB1Q8NHL6 650 aaPredicted RBP13.83□□□□□ -0.2
CLNS1A-210ENST00000528364 RFWD2Q8NHY2 731 aa13.83□□□□□ -0.2
CLNS1A-210ENST00000528364 TCP10LQ8TDR4 215 aa13.83□□□□□ -0.2
CLNS1A-210ENST00000528364 S100PBPQ96BU1 408 aa13.83□□□□□ -0.2
CLNS1A-210ENST00000528364 COQ8BQ96D53 544 aa13.83□□□□□ -0.2
CLNS1A-210ENST00000528364 TMEM204Q9BSN7 226 aa13.83□□□□□ -0.2
CLNS1A-210ENST00000528364 GSX2Q9BZM3 304 aa13.83□□□□□ -0.2
CLNS1A-210ENST00000528364 HHATLQ9HCP6 504 aa13.83□□□□□ -0.2
CLNS1A-210ENST00000528364 IGHV3-15A0A0B4J1V0 119 aa13.82□□□□□ -0.2
CLNS1A-210ENST00000528364 C9JVG2 144 aa13.82□□□□□ -0.2
CLNS1A-210ENST00000528364 NPIPB9F8W1W9 429 aa13.82□□□□□ -0.2
CLNS1A-210ENST00000528364 SKAP2O75563 359 aaPredicted RBP13.82□□□□□ -0.2
CLNS1A-210ENST00000528364 PSMB1P20618 241 aaKnown RBP13.82□□□□□ -0.2
CLNS1A-210ENST00000528364 MAPK1P28482 360 aa13.82□□□□□ -0.2
CLNS1A-210ENST00000528364 EIF1P41567 113 aaKnown RBP13.82□□□□□ -0.2
CLNS1A-210ENST00000528364 P2RX1P51575 399 aa13.82□□□□□ -0.2
CLNS1A-210ENST00000528364 ATP12AP54707 1039 aa13.82□□□□□ -0.2
CLNS1A-210ENST00000528364 RPS26P62854 115 aaKnown RBP13.82□□□□□ -0.2
CLNS1A-210ENST00000528364 GTF2IRD2BQ6EKJ0 949 aa13.82□□□□□ -0.2
CLNS1A-210ENST00000528364 TFAP2EQ6VUC0 442 aa13.82□□□□□ -0.2
CLNS1A-210ENST00000528364 MTERF4Q7Z6M4 381 aaKnown RBP13.82□□□□□ -0.2
CLNS1A-210ENST00000528364 ATG4DQ86TL0 474 aaPredicted RBP13.82□□□□□ -0.2
CLNS1A-210ENST00000528364 GTF2IRD2Q86UP8 949 aa13.82□□□□□ -0.2
CLNS1A-210ENST00000528364 STK32CQ86UX6 486 aa13.82□□□□□ -0.2
CLNS1A-210ENST00000528364 PRIMA1Q86XR5 153 aa13.82□□□□□ -0.2
CLNS1A-210ENST00000528364 ZNF614Q8N883 585 aa13.82□□□□□ -0.2
CLNS1A-210ENST00000528364 OR5D16Q8NGK9 328 aa13.82□□□□□ -0.2
CLNS1A-210ENST00000528364 PSMA8Q8TAA3 256 aa13.82□□□□□ -0.2
CLNS1A-210ENST00000528364 RNF128Q8TEB7 428 aa13.82□□□□□ -0.2
CLNS1A-210ENST00000528364 AKAP1Q92667 903 aaKnown RBP eCLIP13.82□□□□□ -0.2
CLNS1A-210ENST00000528364 NEUROG1Q92886 237 aa13.82□□□□□ -0.2
CLNS1A-210ENST00000528364 ZNF775Q96BV0 537 aaPredicted RBP13.82□□□□□ -0.2
CLNS1A-210ENST00000528364 OR7D2Q96RA2 312 aa13.82□□□□□ -0.2
CLNS1A-210ENST00000528364 COQ10BQ9H8M1 238 aa13.82□□□□□ -0.2
CLNS1A-210ENST00000528364 EML4Q9HC35 981 aaKnown RBP13.82□□□□□ -0.2
CLNS1A-210ENST00000528364 MKS1Q9NXB0 559 aa13.82□□□□□ -0.2
CLNS1A-210ENST00000528364 FAF1Q9UNN5 650 aaPredicted RBP13.82□□□□□ -0.2
CLNS1A-210ENST00000528364 A0A1W2PNR3 127 aa13.81□□□□□ -0.2
CLNS1A-210ENST00000528364 KIAA1324LA8MWY0 1029 aaPredicted RBP13.81□□□□□ -0.2
CLNS1A-210ENST00000528364 ZNF814B7Z6K7 855 aa13.81□□□□□ -0.2
CLNS1A-210ENST00000528364 HS3ST1O14792 307 aa13.81□□□□□ -0.2
CLNS1A-210ENST00000528364 CFLARO15519 480 aa13.81□□□□□ -0.2
CLNS1A-210ENST00000528364 HSPA4LO95757 839 aa13.81□□□□□ -0.2
CLNS1A-210ENST00000528364 ADAP00813 363 aa13.81□□□□□ -0.2
CLNS1A-210ENST00000528364 PRKCAP17252 672 aa13.81□□□□□ -0.2
CLNS1A-210ENST00000528364 EDNRAP25101 427 aa13.81□□□□□ -0.2
CLNS1A-210ENST00000528364 CASP9P55211 416 aa13.81□□□□□ -0.2
CLNS1A-210ENST00000528364 LSM12Q3MHD2 195 aaKnown RBP13.81□□□□□ -0.2
CLNS1A-210ENST00000528364 ATP6AP1LQ52LC2 224 aa13.81□□□□□ -0.2
CLNS1A-210ENST00000528364 TMEM201Q5SNT2 666 aa13.81□□□□□ -0.2
CLNS1A-210ENST00000528364 FCRLAQ7L513 359 aa13.81□□□□□ -0.2
CLNS1A-210ENST00000528364 LSRQ86X29 649 aaPredicted RBP13.81□□□□□ -0.2
CLNS1A-210ENST00000528364 RIMKLAQ8IXN7 391 aa13.81□□□□□ -0.2
CLNS1A-210ENST00000528364 GABRG1Q8N1C3 465 aa13.81□□□□□ -0.2
CLNS1A-210ENST00000528364 FNDC5Q8NAU1 212 aa13.81□□□□□ -0.2
CLNS1A-210ENST00000528364 OR56A1Q8NGH5 318 aa13.81□□□□□ -0.2
CLNS1A-210ENST00000528364 TMEM171Q8WVE6 324 aa13.81□□□□□ -0.2
CLNS1A-210ENST00000528364 REXO5Q96IC2 774 aaKnown RBP13.81□□□□□ -0.2
CLNS1A-210ENST00000528364 SDF2Q99470 211 aa13.81□□□□□ -0.2
CLNS1A-210ENST00000528364 HOXD1Q9GZZ0 328 aa13.81□□□□□ -0.2
CLNS1A-210ENST00000528364 SERHL2Q9H4I8 314 aa13.81□□□□□ -0.2
CLNS1A-210ENST00000528364 KCNE5Q9UJ90 142 aa13.81□□□□□ -0.2
CLNS1A-210ENST00000528364 ING1Q9UK53 422 aaPredicted RBP13.81□□□□□ -0.2
CLNS1A-210ENST00000528364 LAMP3Q9UQV4 416 aa13.81□□□□□ -0.2
CLNS1A-210ENST00000528364 DTNAQ9Y4J8 743 aa13.81□□□□□ -0.2
CLNS1A-210ENST00000528364 ACTL7BQ9Y614 415 aa13.81□□□□□ -0.2
CLNS1A-210ENST00000528364 SONP18583 2426 aaKnown RBP13.8□□□□□ -0.2
CLNS1A-210ENST00000528364 CENPVL1A0A0U1RR11 272 aa13.8□□□□□ -0.2
CLNS1A-210ENST00000528364 FAM171A2A8MVW0 826 aa13.8□□□□□ -0.2
CLNS1A-210ENST00000528364 ESPNB1AK53 854 aa13.8□□□□□ -0.2
CLNS1A-210ENST00000528364 FCMRO60667 390 aa13.8□□□□□ -0.2
CLNS1A-210ENST00000528364 LYPLA1O75608 230 aaPredicted RBP13.8□□□□□ -0.2
CLNS1A-210ENST00000528364 PRKD3O94806 890 aa13.8□□□□□ -0.2
CLNS1A-210ENST00000528364 YES1P07947 543 aa13.8□□□□□ -0.2
CLNS1A-210ENST00000528364 PABPC4LP0CB38 370 aaKnown RBP13.8□□□□□ -0.2
CLNS1A-210ENST00000528364 G6PDP11413 515 aa13.8□□□□□ -0.2
CLNS1A-210ENST00000528364 ADH6P28332 368 aa13.8□□□□□ -0.2
CLNS1A-210ENST00000528364 RPL3P39023 403 aaKnown RBP13.8□□□□□ -0.2
CLNS1A-210ENST00000528364 ATP5J2P56134 94 aa13.8□□□□□ -0.2
CLNS1A-210ENST00000528364 HBA1P69905 142 aa13.8□□□□□ -0.2
CLNS1A-210ENST00000528364 CAPRIN1Q14444 709 aaKnown RBP13.8□□□□□ -0.2
CLNS1A-210ENST00000528364 TAB1Q15750 504 aa13.8□□□□□ -0.2
CLNS1A-210ENST00000528364 PGS1Q32NB8 556 aa13.8□□□□□ -0.2
CLNS1A-210ENST00000528364 PDZK1Q5T2W1 519 aa13.8□□□□□ -0.2
CLNS1A-210ENST00000528364 SFRP5Q5T4F7 317 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms