RNA–Protein interactions for RNA: ENST00000525079.5

TRAPPC4-205, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3

Gene TRAPPC4, Length 768 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-205ENST00000525079 C7orf72A4D263 438 aa11.54□□□□□ -0.56
TRAPPC4-205ENST00000525079 HMGN4O00479 90 aa11.54□□□□□ -0.56
TRAPPC4-205ENST00000525079 RFXANKO14593 260 aa11.54□□□□□ -0.56
TRAPPC4-205ENST00000525079 TNFSF11O14788 317 aa11.54□□□□□ -0.56
TRAPPC4-205ENST00000525079 ZNF264O43296 627 aa11.54□□□□□ -0.56
TRAPPC4-205ENST00000525079 CXCL13O43927 109 aa11.54□□□□□ -0.56
TRAPPC4-205ENST00000525079 AQP8O94778 261 aa11.54□□□□□ -0.56
TRAPPC4-205ENST00000525079 AGR2O95994 175 aa11.54□□□□□ -0.56
TRAPPC4-205ENST00000525079 UBL4AP11441 157 aa11.54□□□□□ -0.56
TRAPPC4-205ENST00000525079 SHC1P29353 583 aa11.54□□□□□ -0.56
TRAPPC4-205ENST00000525079 SFTPDP35247 375 aa11.54□□□□□ -0.56
TRAPPC4-205ENST00000525079 SLC6A8P48029 635 aa11.54□□□□□ -0.56
TRAPPC4-205ENST00000525079 CPA2P48052 419 aa11.54□□□□□ -0.56
TRAPPC4-205ENST00000525079 IDH3AP50213 366 aa11.54□□□□□ -0.56
TRAPPC4-205ENST00000525079 RAC1P63000 192 aa11.54□□□□□ -0.56
TRAPPC4-205ENST00000525079 ZNF141Q15928 474 aa11.54□□□□□ -0.56
TRAPPC4-205ENST00000525079 SYPL1Q16563 259 aa11.54□□□□□ -0.56
TRAPPC4-205ENST00000525079 GSTA3Q16772 222 aa11.54□□□□□ -0.56
TRAPPC4-205ENST00000525079 COX20Q5RI15 118 aa11.54□□□□□ -0.56
TRAPPC4-205ENST00000525079 OR2A2Q6IF42 318 aa11.54□□□□□ -0.56
TRAPPC4-205ENST00000525079 TYW3Q6IPR3 259 aaKnown RBP11.54□□□□□ -0.56
TRAPPC4-205ENST00000525079 BTLAQ7Z6A9 289 aa11.54□□□□□ -0.56
TRAPPC4-205ENST00000525079 LILRA2Q8N149 483 aa11.54□□□□□ -0.56
TRAPPC4-205ENST00000525079 METTL25Q8N6Q8 603 aa11.54□□□□□ -0.56
TRAPPC4-205ENST00000525079 ANKFN1Q8N957 763 aa11.54□□□□□ -0.56
TRAPPC4-205ENST00000525079 GLB1L3Q8NCI6 653 aaPredicted RBP11.54□□□□□ -0.56
TRAPPC4-205ENST00000525079 OR10D3Q8NH80 312 aa11.54□□□□□ -0.56
TRAPPC4-205ENST00000525079 ZG16BQ96DA0 208 aa11.54□□□□□ -0.56
TRAPPC4-205ENST00000525079 STARD4Q96DR4 205 aa11.54□□□□□ -0.56
TRAPPC4-205ENST00000525079 ADGRG7Q96K78 797 aa11.54□□□□□ -0.56
TRAPPC4-205ENST00000525079 EBF4Q9BQW3 602 aa11.54□□□□□ -0.56
TRAPPC4-205ENST00000525079 THUMPD3Q9BV44 507 aaKnown RBP11.54□□□□□ -0.56
TRAPPC4-205ENST00000525079 PRRG4Q9BZD6 226 aa11.54□□□□□ -0.56
TRAPPC4-205ENST00000525079 NMUR2Q9GZQ4 415 aa11.54□□□□□ -0.56
TRAPPC4-205ENST00000525079 ACBD3Q9H3P7 528 aa11.54□□□□□ -0.56
TRAPPC4-205ENST00000525079 INTS9Q9NV88 658 aaKnown RBP11.54□□□□□ -0.56
TRAPPC4-205ENST00000525079 GALNT8Q9NY28 637 aa11.54□□□□□ -0.56
TRAPPC4-205ENST00000525079 STOML1Q9UBI4 398 aa11.54□□□□□ -0.56
TRAPPC4-205ENST00000525079 FOXD3Q9UJU5 478 aaPredicted RBP11.54□□□□□ -0.56
TRAPPC4-205ENST00000525079 ITGB1BP2Q9UKP3 347 aa11.54□□□□□ -0.56
TRAPPC4-205ENST00000525079 CLEC4AQ9UMR7 237 aa11.54□□□□□ -0.56
TRAPPC4-205ENST00000525079 WDR45Q9Y484 360 aa11.54□□□□□ -0.56
TRAPPC4-205ENST00000525079 A8MXE2 369 aa11.53□□□□□ -0.56
TRAPPC4-205ENST00000525079 HMGB1P1B2RPK0 211 aaPredicted RBP11.53□□□□□ -0.56
TRAPPC4-205ENST00000525079 KIAA0513O60268 411 aa11.53□□□□□ -0.56
TRAPPC4-205ENST00000525079 EIF4E2O60573 245 aaKnown RBP11.53□□□□□ -0.56
TRAPPC4-205ENST00000525079 BCAS1O75363 584 aaPredicted RBP11.53□□□□□ -0.56
TRAPPC4-205ENST00000525079 SASH3O75995 380 aa11.53□□□□□ -0.56
TRAPPC4-205ENST00000525079 CSTAP01040 98 aa11.53□□□□□ -0.56
TRAPPC4-205ENST00000525079 IL6P05231 212 aa11.53□□□□□ -0.56
TRAPPC4-205ENST00000525079 UBTFL6P0CB48 400 aaPredicted RBP11.53□□□□□ -0.56
TRAPPC4-205ENST00000525079 ME2P23368 584 aa11.53□□□□□ -0.56
TRAPPC4-205ENST00000525079 CPOXP36551 454 aa11.53□□□□□ -0.56
TRAPPC4-205ENST00000525079 KIR2DL2P43627 348 aaPredicted RBP11.53□□□□□ -0.56
TRAPPC4-205ENST00000525079 POLR2JP52435 117 aaKnown RBP11.53□□□□□ -0.56
TRAPPC4-205ENST00000525079 PPP2R2AP63151 447 aa11.53□□□□□ -0.56
TRAPPC4-205ENST00000525079 CHRNEQ04844 493 aa11.53□□□□□ -0.56
TRAPPC4-205ENST00000525079 QPRTQ15274 297 aa11.53□□□□□ -0.56
TRAPPC4-205ENST00000525079 CTU2Q2VPK5 515 aaKnown RBP11.53□□□□□ -0.56
TRAPPC4-205ENST00000525079 GTDC1Q4AE62 458 aa11.53□□□□□ -0.56
TRAPPC4-205ENST00000525079 TIGD2Q4W5G0 525 aa11.53□□□□□ -0.56
TRAPPC4-205ENST00000525079 HBMQ6B0K9 141 aa11.53□□□□□ -0.56
TRAPPC4-205ENST00000525079 FRRS1Q6ZNA5 592 aa11.53□□□□□ -0.56
TRAPPC4-205ENST00000525079 KIF18BQ86Y91 864 aa11.53□□□□□ -0.56
TRAPPC4-205ENST00000525079 MIER2Q8N344 545 aa11.53□□□□□ -0.56
TRAPPC4-205ENST00000525079 TRIML2Q8N7C3 387 aa11.53□□□□□ -0.56
TRAPPC4-205ENST00000525079 TOR1AIP2Q8NFQ8 470 aa11.53□□□□□ -0.56
TRAPPC4-205ENST00000525079 OR5W2Q8NH69 310 aa11.53□□□□□ -0.56
TRAPPC4-205ENST00000525079 OR2V1Q8NHB1 315 aa11.53□□□□□ -0.56
TRAPPC4-205ENST00000525079 NRGNQ92686 78 aa11.53□□□□□ -0.56
TRAPPC4-205ENST00000525079 OSTF1Q92882 214 aa11.53□□□□□ -0.56
TRAPPC4-205ENST00000525079 VPS33AQ96AX1 596 aa11.53□□□□□ -0.56
TRAPPC4-205ENST00000525079 THOC1Q96FV9 657 aaKnown RBP11.53□□□□□ -0.56
TRAPPC4-205ENST00000525079 GPATCH1Q9BRR8 931 aaKnown RBP11.53□□□□□ -0.56
TRAPPC4-205ENST00000525079 LAT2Q9GZY6 243 aa11.53□□□□□ -0.56
TRAPPC4-205ENST00000525079 QRSL1Q9H0R6 528 aaKnown RBP11.53□□□□□ -0.56
TRAPPC4-205ENST00000525079 OPN3Q9H1Y3 402 aaPredicted RBP11.53□□□□□ -0.56
TRAPPC4-205ENST00000525079 PIGMQ9H3S5 423 aa11.53□□□□□ -0.56
TRAPPC4-205ENST00000525079 VIPAS39Q9H9C1 493 aa11.53□□□□□ -0.56
TRAPPC4-205ENST00000525079 RNF122Q9H9V4 155 aa11.53□□□□□ -0.56
TRAPPC4-205ENST00000525079 SLC24A3Q9HC58 644 aa11.53□□□□□ -0.56
TRAPPC4-205ENST00000525079 TCF7L2Q9NQB0 619 aa11.53□□□□□ -0.56
TRAPPC4-205ENST00000525079 SDR39U1Q9NRG7 319 aaPredicted RBP11.53□□□□□ -0.56
TRAPPC4-205ENST00000525079 ZIM2Q9NZV7 527 aa11.53□□□□□ -0.56
TRAPPC4-205ENST00000525079 PACSIN3Q9UKS6 424 aa11.53□□□□□ -0.56
TRAPPC4-205ENST00000525079 ZNF175Q9Y473 711 aa11.53□□□□□ -0.56
TRAPPC4-205ENST00000525079 ADGRG4Q8IZF6 3080 aa11.53□□□□□ -0.56
TRAPPC4-205ENST00000525079 TUBAL3A6NHL2 446 aa11.52□□□□□ -0.57
TRAPPC4-205ENST00000525079 CLDN24A6NM45 220 aa11.52□□□□□ -0.57
TRAPPC4-205ENST00000525079 POLR3GO15318 223 aaPredicted RBP11.52□□□□□ -0.57
TRAPPC4-205ENST00000525079 SYNGR4O95473 234 aa11.52□□□□□ -0.57
TRAPPC4-205ENST00000525079 H6PDO95479 791 aa11.52□□□□□ -0.57
TRAPPC4-205ENST00000525079 ANP32DO95626 131 aa11.52□□□□□ -0.57
TRAPPC4-205ENST00000525079 CRHP06850 196 aa11.52□□□□□ -0.57
TRAPPC4-205ENST00000525079 PRKCAP17252 672 aa11.52□□□□□ -0.57
TRAPPC4-205ENST00000525079 CAPN3P20807 821 aa11.52□□□□□ -0.57
TRAPPC4-205ENST00000525079 EIF1P41567 113 aaKnown RBP11.52□□□□□ -0.57
TRAPPC4-205ENST00000525079 AQP5P55064 265 aa11.52□□□□□ -0.57
TRAPPC4-205ENST00000525079 SUMO3P55854 103 aaPredicted RBP11.52□□□□□ -0.57
TRAPPC4-205ENST00000525079 EEF1A1P68104 462 aaKnown RBP11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms