RNA–Protein interactions for RNA: ENST00000523441.1

SDCBP-211, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-211ENST00000523441 FAM110BQ8TC76 370 aa10.23□□□□□ -0.77
SDCBP-211ENST00000523441 ZFP90Q8TF47 636 aa10.23□□□□□ -0.77
SDCBP-211ENST00000523441 JADE3Q92613 823 aa10.23□□□□□ -0.77
SDCBP-211ENST00000523441 GCDHQ92947 438 aaPredicted RBP10.23□□□□□ -0.77
SDCBP-211ENST00000523441 ELP4Q96EB1 424 aa10.23□□□□□ -0.77
SDCBP-211ENST00000523441 PSD2Q9BQI7 771 aa10.23□□□□□ -0.77
SDCBP-211ENST00000523441 INPP5KQ9BT40 448 aa10.23□□□□□ -0.77
SDCBP-211ENST00000523441 LMF2Q9BU23 707 aaKnown RBP10.23□□□□□ -0.77
SDCBP-211ENST00000523441 ACPTQ9BZG2 426 aa10.23□□□□□ -0.77
SDCBP-211ENST00000523441 BPESC1Q9GZL8 116 aa10.23□□□□□ -0.77
SDCBP-211ENST00000523441 COQ10BQ9H8M1 238 aa10.23□□□□□ -0.77
SDCBP-211ENST00000523441 KLHL9Q9P2J3 617 aa10.23□□□□□ -0.77
SDCBP-211ENST00000523441 TMEFF2Q9UIK5 374 aaPredicted RBP10.23□□□□□ -0.77
SDCBP-211ENST00000523441 ARFGEF3Q5TH69 2177 aa10.23□□□□□ -0.77
SDCBP-211ENST00000523441 MGAM2Q2M2H8 2515 aa10.22□□□□□ -0.77
SDCBP-211ENST00000523441 A0A087WV62 115 aa10.22□□□□□ -0.77
SDCBP-211ENST00000523441 HMX2A2RU54 273 aa10.22□□□□□ -0.77
SDCBP-211ENST00000523441 VWC2LB2RUY7 222 aa10.22□□□□□ -0.77
SDCBP-211ENST00000523441 ALG1L2C9J202 215 aa10.22□□□□□ -0.77
SDCBP-211ENST00000523441 ATP6V1G2-DDX39BF2Z307 99 aa10.22□□□□□ -0.77
SDCBP-211ENST00000523441 STX16-NPEPL1H3BU86 382 aa10.22□□□□□ -0.77
SDCBP-211ENST00000523441 SCDO00767 359 aa10.22□□□□□ -0.77
SDCBP-211ENST00000523441 STX16O14662 325 aa10.22□□□□□ -0.77
SDCBP-211ENST00000523441 SLU7O95391 586 aaKnown RBP10.22□□□□□ -0.77
SDCBP-211ENST00000523441 KRT6AP02538 564 aa10.22□□□□□ -0.77
SDCBP-211ENST00000523441 KRT6BP04259 564 aa10.22□□□□□ -0.77
SDCBP-211ENST00000523441 PTAFRP25105 342 aa10.22□□□□□ -0.77
SDCBP-211ENST00000523441 MAGEA4P43358 317 aa10.22□□□□□ -0.77
SDCBP-211ENST00000523441 KRT6CP48668 564 aa10.22□□□□□ -0.77
SDCBP-211ENST00000523441 SERPINB8P50452 374 aa10.22□□□□□ -0.77
SDCBP-211ENST00000523441 CCR4P51679 360 aa10.22□□□□□ -0.77
SDCBP-211ENST00000523441 PLTPP55058 493 aa10.22□□□□□ -0.77
SDCBP-211ENST00000523441 ZNF117Q03924 483 aa10.22□□□□□ -0.77
SDCBP-211ENST00000523441 TOMM34Q15785 309 aaPredicted RBP10.22□□□□□ -0.77
SDCBP-211ENST00000523441 ANKRD26P1Q6NSI1 321 aa10.22□□□□□ -0.77
SDCBP-211ENST00000523441 TMCO5AQ8N6Q1 288 aa10.22□□□□□ -0.77
SDCBP-211ENST00000523441 ZNF614Q8N883 585 aa10.22□□□□□ -0.77
SDCBP-211ENST00000523441 METTL6Q8TCB7 284 aa10.22□□□□□ -0.77
SDCBP-211ENST00000523441 ZNF483Q8TF39 744 aaPredicted RBP10.22□□□□□ -0.77
SDCBP-211ENST00000523441 OR5B2Q96R09 309 aa10.22□□□□□ -0.77
SDCBP-211ENST00000523441 KCNA7Q96RP8 456 aa10.22□□□□□ -0.77
SDCBP-211ENST00000523441 USB1Q9BQ65 265 aaKnown RBP10.22□□□□□ -0.77
SDCBP-211ENST00000523441 BHLHE41Q9C0J9 482 aaPredicted RBP10.22□□□□□ -0.77
SDCBP-211ENST00000523441 METTL17Q9H7H0 456 aaPredicted RBP10.22□□□□□ -0.77
SDCBP-211ENST00000523441 NTMQ9P121 344 aa10.22□□□□□ -0.77
SDCBP-211ENST00000523441 ZNF225Q9UK10 706 aa10.22□□□□□ -0.77
SDCBP-211ENST00000523441 POLR3HQ9Y535 204 aaPredicted RBP10.22□□□□□ -0.77
SDCBP-211ENST00000523441 TIMM22Q9Y584 194 aa10.22□□□□□ -0.77
SDCBP-211ENST00000523441 PKD1L1Q8TDX9 2849 aa10.21□□□□□ -0.77
SDCBP-211ENST00000523441 C7orf72A4D263 438 aa10.21□□□□□ -0.77
SDCBP-211ENST00000523441 GJE1A6NN92 205 aa10.21□□□□□ -0.77
SDCBP-211ENST00000523441 SMAD9O15198 467 aaKnown RBP10.21□□□□□ -0.77
SDCBP-211ENST00000523441 EIF3HO15372 352 aaKnown RBP eCLIP10.21□□□□□ -0.77
SDCBP-211ENST00000523441 ULK1O75385 1050 aa10.21□□□□□ -0.77
SDCBP-211ENST00000523441 SKAP2O75563 359 aaPredicted RBP10.21□□□□□ -0.77
SDCBP-211ENST00000523441 SUPT7LO94864 414 aa10.21□□□□□ -0.77
SDCBP-211ENST00000523441 RPS17P08708 135 aaKnown RBP10.21□□□□□ -0.77
SDCBP-211ENST00000523441 GSTA2P09210 222 aa10.21□□□□□ -0.77
SDCBP-211ENST00000523441 RBP1P09455 135 aa10.21□□□□□ -0.77
SDCBP-211ENST00000523441 LINGO3P0C6S8 592 aa10.21□□□□□ -0.77
SDCBP-211ENST00000523441 ACP2P11117 423 aa10.21□□□□□ -0.77
SDCBP-211ENST00000523441 ZNF23P17027 643 aa10.21□□□□□ -0.77
SDCBP-211ENST00000523441 TCP1P17987 556 aaKnown RBP10.21□□□□□ -0.77
SDCBP-211ENST00000523441 DDCP20711 480 aa10.21□□□□□ -0.77
SDCBP-211ENST00000523441 EFNA1P20827 205 aaPredicted RBP10.21□□□□□ -0.77
SDCBP-211ENST00000523441 APEX1P27695 318 aaKnown RBP10.21□□□□□ -0.77
SDCBP-211ENST00000523441 FOXG1P55316 489 aaPredicted RBP10.21□□□□□ -0.77
SDCBP-211ENST00000523441 CCNIQ14094 377 aa10.21□□□□□ -0.77
SDCBP-211ENST00000523441 SPIN4Q56A73 249 aa10.21□□□□□ -0.77
SDCBP-211ENST00000523441 ZNF544Q6NX49 715 aa10.21□□□□□ -0.77
SDCBP-211ENST00000523441 METTL2BQ6P1Q9 378 aaKnown RBP10.21□□□□□ -0.77
SDCBP-211ENST00000523441 VHLLQ6RSH7 139 aa10.21□□□□□ -0.77
SDCBP-211ENST00000523441 CBLN3Q6UW01 205 aa10.21□□□□□ -0.77
SDCBP-211ENST00000523441 SPATA19Q7Z5L4 167 aa10.21□□□□□ -0.77
SDCBP-211ENST00000523441 GALNT5Q7Z7M9 940 aa10.21□□□□□ -0.77
SDCBP-211ENST00000523441 OR2L13Q8N349 312 aa10.21□□□□□ -0.77
SDCBP-211ENST00000523441 ACTRT2Q8TDY3 377 aa10.21□□□□□ -0.77
SDCBP-211ENST00000523441 C16orf58Q96GQ5 468 aa10.21□□□□□ -0.77
SDCBP-211ENST00000523441 AMDHD1Q96NU7 426 aa10.21□□□□□ -0.77
SDCBP-211ENST00000523441 SNX18Q96RF0 628 aa10.21□□□□□ -0.77
SDCBP-211ENST00000523441 ING1Q9UK53 422 aaPredicted RBP10.21□□□□□ -0.77
SDCBP-211ENST00000523441 CARD8Q9Y2G2 431 aa10.21□□□□□ -0.77
SDCBP-211ENST00000523441 SLC25A15Q9Y619 301 aa10.21□□□□□ -0.77
SDCBP-211ENST00000523441 A8MT66 165 aa10.2□□□□□ -0.78
SDCBP-211ENST00000523441 GTPBP1O00178 669 aaKnown RBP10.2□□□□□ -0.78
SDCBP-211ENST00000523441 CYP7B1O75881 506 aa10.2□□□□□ -0.78
SDCBP-211ENST00000523441 KCNK2O95069 426 aa10.2□□□□□ -0.78
SDCBP-211ENST00000523441 PRPS2P11908 318 aa10.2□□□□□ -0.78
SDCBP-211ENST00000523441 CDH2P19022 906 aaPredicted RBP10.2□□□□□ -0.78
SDCBP-211ENST00000523441 COX5AP20674 150 aa10.2□□□□□ -0.78
SDCBP-211ENST00000523441 APOBEC3AP31941 199 aaPredicted RBP10.2□□□□□ -0.78
SDCBP-211ENST00000523441 CLCQ05315 142 aa10.2□□□□□ -0.78
SDCBP-211ENST00000523441 TRADDQ15628 312 aa10.2□□□□□ -0.78
SDCBP-211ENST00000523441 ARL13AQ5H913 290 aaPredicted RBP10.2□□□□□ -0.78
SDCBP-211ENST00000523441 LRIG3Q6UXM1 1119 aa10.2□□□□□ -0.78
SDCBP-211ENST00000523441 P2RY8Q86VZ1 359 aa10.2□□□□□ -0.78
SDCBP-211ENST00000523441 CREG2Q8IUH2 290 aa10.2□□□□□ -0.78
SDCBP-211ENST00000523441 SLC43A2Q8N370 569 aa10.2□□□□□ -0.78
SDCBP-211ENST00000523441 COX18Q8N8Q8 333 aa10.2□□□□□ -0.78
SDCBP-211ENST00000523441 TOR1AIP2Q8NFQ8 470 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms