RNA–Protein interactions for RNA: ENST00000522843.5

SDCBP-210, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 764 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-210ENST00000522843 SQLEQ14534 574 aa5.88□□□□□ -1.47
SDCBP-210ENST00000522843 PDCD1Q15116 288 aa5.88□□□□□ -1.47
SDCBP-210ENST00000522843 EXOC3L2Q2M3D2 409 aa5.88□□□□□ -1.47
SDCBP-210ENST00000522843 NCMAPQ5T1S8 102 aa5.88□□□□□ -1.47
SDCBP-210ENST00000522843 PGM2L1Q6PCE3 622 aa5.88□□□□□ -1.47
SDCBP-210ENST00000522843 ENPP6Q6UWR7 440 aa5.88□□□□□ -1.47
SDCBP-210ENST00000522843 DTX2Q86UW9 622 aa5.88□□□□□ -1.47
SDCBP-210ENST00000522843 PRR22Q8IZ63 422 aa5.88□□□□□ -1.47
SDCBP-210ENST00000522843 TBC1D19Q8N5T2 526 aa5.88□□□□□ -1.47
SDCBP-210ENST00000522843 ZNF525Q8N782 197 aa5.88□□□□□ -1.47
SDCBP-210ENST00000522843 KBTBD8Q8NFY9 601 aa5.88□□□□□ -1.47
SDCBP-210ENST00000522843 OR2L5Q8NG80 312 aa5.88□□□□□ -1.47
SDCBP-210ENST00000522843 OR1J4Q8NGS1 313 aa5.88□□□□□ -1.47
SDCBP-210ENST00000522843 OR6Y1Q8NGX8 325 aa5.88□□□□□ -1.47
SDCBP-210ENST00000522843 OR14L1PQ8NHC6 308 aa5.88□□□□□ -1.47
SDCBP-210ENST00000522843 C10orf105Q8TEF2 133 aa5.88□□□□□ -1.47
SDCBP-210ENST00000522843 HGDQ93099 445 aa5.88□□□□□ -1.47
SDCBP-210ENST00000522843 FBXL8Q96CD0 374 aa5.88□□□□□ -1.47
SDCBP-210ENST00000522843 REPS1Q96D71 796 aa5.88□□□□□ -1.47
SDCBP-210ENST00000522843 APOPT1Q96IL0 206 aa5.88□□□□□ -1.47
SDCBP-210ENST00000522843 VPS39Q96JC1 886 aa5.88□□□□□ -1.47
SDCBP-210ENST00000522843 UBXN10Q96LJ8 280 aa5.88□□□□□ -1.47
SDCBP-210ENST00000522843 MAGEB18Q96M61 343 aa5.88□□□□□ -1.47
SDCBP-210ENST00000522843 NODALQ96S42 347 aa5.88□□□□□ -1.47
SDCBP-210ENST00000522843 AIF1LQ9BQI0 150 aa5.88□□□□□ -1.47
SDCBP-210ENST00000522843 NTMT1Q9BV86 223 aa5.88□□□□□ -1.47
SDCBP-210ENST00000522843 ERVK-6Q9BXR3 956 aa5.88□□□□□ -1.47
SDCBP-210ENST00000522843 ACTR6Q9GZN1 396 aa5.88□□□□□ -1.47
SDCBP-210ENST00000522843 RNF122Q9H9V4 155 aa5.88□□□□□ -1.47
SDCBP-210ENST00000522843 POPDC3Q9HBV1 291 aa5.88□□□□□ -1.47
SDCBP-210ENST00000522843 PPANQ9NQ55 473 aaKnown RBP5.88□□□□□ -1.47
SDCBP-210ENST00000522843 IARS2Q9NSE4 1012 aaKnown RBP5.88□□□□□ -1.47
SDCBP-210ENST00000522843 INTS9Q9NV88 658 aaKnown RBP5.88□□□□□ -1.47
SDCBP-210ENST00000522843 ZKSCAN7Q9P0L1 754 aaPredicted RBP5.88□□□□□ -1.47
SDCBP-210ENST00000522843 ARMCX1Q9P291 453 aa5.88□□□□□ -1.47
SDCBP-210ENST00000522843 TXNDC16Q9P2K2 825 aa5.88□□□□□ -1.47
SDCBP-210ENST00000522843 KCNS2Q9ULS6 477 aa5.88□□□□□ -1.47
SDCBP-210ENST00000522843 ERVK-19Q9WJR5 959 aa5.88□□□□□ -1.47
SDCBP-210ENST00000522843 MTO1Q9Y2Z2 717 aaKnown RBP5.88□□□□□ -1.47
SDCBP-210ENST00000522843 RNF115Q9Y4L5 304 aa5.88□□□□□ -1.47
SDCBP-210ENST00000522843 WNK1Q9H4A3 2382 aa5.87□□□□□ -1.47
SDCBP-210ENST00000522843 A0A1W2PP18 115 aa5.87□□□□□ -1.47
SDCBP-210ENST00000522843 A0A1W2PS29 197 aa5.87□□□□□ -1.47
SDCBP-210ENST00000522843 TMEM89A2RUT3 159 aa5.87□□□□□ -1.47
SDCBP-210ENST00000522843 GMNCA6NCL1 334 aa5.87□□□□□ -1.47
SDCBP-210ENST00000522843 DPRXA6NFQ7 191 aa5.87□□□□□ -1.47
SDCBP-210ENST00000522843 SMIM23A6NLE4 172 aa5.87□□□□□ -1.47
SDCBP-210ENST00000522843 RTCAO00442 366 aaKnown RBP5.87□□□□□ -1.47
SDCBP-210ENST00000522843 TP53I11O14683 189 aa5.87□□□□□ -1.47
SDCBP-210ENST00000522843 PFDN6O15212 129 aa5.87□□□□□ -1.47
SDCBP-210ENST00000522843 ZIC3O60481 467 aa5.87□□□□□ -1.47
SDCBP-210ENST00000522843 RAMP1O60894 148 aa5.87□□□□□ -1.47
SDCBP-210ENST00000522843 PIAS1O75925 651 aa5.87□□□□□ -1.47
SDCBP-210ENST00000522843 C2P06681 752 aa5.87□□□□□ -1.47
SDCBP-210ENST00000522843 LPLP06858 475 aa5.87□□□□□ -1.47
SDCBP-210ENST00000522843 ABCB1P08183 1280 aaPredicted RBP5.87□□□□□ -1.47
SDCBP-210ENST00000522843 SLC25A16P16260 332 aa5.87□□□□□ -1.47
SDCBP-210ENST00000522843 PPP3CBP16298 524 aa5.87□□□□□ -1.47
SDCBP-210ENST00000522843 TYK2P29597 1187 aa5.87□□□□□ -1.47
SDCBP-210ENST00000522843 HPDP32754 393 aaPredicted RBP5.87□□□□□ -1.47
SDCBP-210ENST00000522843 SLC1A2P43004 574 aa5.87□□□□□ -1.47
SDCBP-210ENST00000522843 SERPINB8P50452 374 aa5.87□□□□□ -1.47
SDCBP-210ENST00000522843 NUDT6P53370 316 aa5.87□□□□□ -1.47
SDCBP-210ENST00000522843 SUCLG1P53597 346 aaKnown RBP5.87□□□□□ -1.47
SDCBP-210ENST00000522843 ZNF267Q14586 743 aaPredicted RBP5.87□□□□□ -1.47
SDCBP-210ENST00000522843 CTU2Q2VPK5 515 aaKnown RBP5.87□□□□□ -1.47
SDCBP-210ENST00000522843 C18orf21Q32NC0 220 aaPredicted RBP5.87□□□□□ -1.47
SDCBP-210ENST00000522843 CCDC153Q494R4 210 aa5.87□□□□□ -1.47
SDCBP-210ENST00000522843 CT83Q5H943 113 aa5.87□□□□□ -1.47
SDCBP-210ENST00000522843 ZNF470Q6ECI4 717 aa5.87□□□□□ -1.47
SDCBP-210ENST00000522843 OR2A2Q6IF42 318 aa5.87□□□□□ -1.47
SDCBP-210ENST00000522843 C11orf71Q6IPW1 123 aa5.87□□□□□ -1.47
SDCBP-210ENST00000522843 FAM166AQ6J272 317 aa5.87□□□□□ -1.47
SDCBP-210ENST00000522843 PPP4R4Q6NUP7 873 aa5.87□□□□□ -1.47
SDCBP-210ENST00000522843 TRIM40Q6P9F5 258 aa5.87□□□□□ -1.47
SDCBP-210ENST00000522843 P4HA3Q7Z4N8 544 aa5.87□□□□□ -1.47
SDCBP-210ENST00000522843 THOC6Q86W42 341 aaKnown RBP5.87□□□□□ -1.47
SDCBP-210ENST00000522843 CLRN3Q8NCR9 226 aa5.87□□□□□ -1.47
SDCBP-210ENST00000522843 C1orf162Q8NEQ5 155 aaPredicted RBP5.87□□□□□ -1.47
SDCBP-210ENST00000522843 FNDC9Q8TBE3 224 aa5.87□□□□□ -1.47
SDCBP-210ENST00000522843 TCP10LQ8TDR4 215 aa5.87□□□□□ -1.47
SDCBP-210ENST00000522843 ADIPOR1Q96A54 375 aa5.87□□□□□ -1.47
SDCBP-210ENST00000522843 PDLIM5Q96HC4 596 aaKnown RBP5.87□□□□□ -1.47
SDCBP-210ENST00000522843 GPR78Q96P69 363 aa5.87□□□□□ -1.47
SDCBP-210ENST00000522843 DGAT2Q96PD7 388 aa5.87□□□□□ -1.47
SDCBP-210ENST00000522843 F2RL3Q96RI0 385 aa5.87□□□□□ -1.47
SDCBP-210ENST00000522843 NDNQ99608 321 aa5.87□□□□□ -1.47
SDCBP-210ENST00000522843 TRIM2Q9C040 744 aa5.87□□□□□ -1.47
SDCBP-210ENST00000522843 REXO4Q9GZR2 422 aaKnown RBP5.87□□□□□ -1.47
SDCBP-210ENST00000522843 LYRM4Q9HD34 91 aa5.87□□□□□ -1.47
SDCBP-210ENST00000522843 KCNK9Q9NPC2 374 aa5.87□□□□□ -1.47
SDCBP-210ENST00000522843 ARL15Q9NXU5 204 aa5.87□□□□□ -1.47
SDCBP-210ENST00000522843 NKIRAS1Q9NYS0 192 aa5.87□□□□□ -1.47
SDCBP-210ENST00000522843 FBXL2Q9UKC9 423 aa5.87□□□□□ -1.47
SDCBP-210ENST00000522843 ZNF490Q9ULM2 529 aaPredicted RBP5.87□□□□□ -1.47
SDCBP-210ENST00000522843 PROCRQ9UNN8 238 aa5.87□□□□□ -1.47
SDCBP-210ENST00000522843 EXO1Q9UQ84 846 aaKnown RBP5.87□□□□□ -1.47
SDCBP-210ENST00000522843 SLC22A14Q9Y267 594 aa5.87□□□□□ -1.47
SDCBP-210ENST00000522843 C2orf92A0A1B0GVN3 265 aa5.86□□□□□ -1.47
SDCBP-210ENST00000522843 KRTAP29-1A8MX34 341 aaPredicted RBP5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms