RNA–Protein interactions for RNA: ENST00000520602.5

MCF2-209, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2, Length 3,945 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-209ENST00000520602 SLC1A3P43003 542 aa9.43□□□□□ -0.9
MCF2-209ENST00000520602 CAPZA2P47755 286 aa9.43□□□□□ -0.9
MCF2-209ENST00000520602 ZNF181Q2M3W8 571 aa9.43□□□□□ -0.9
MCF2-209ENST00000520602 TCTE1Q5JU00 501 aa9.43□□□□□ -0.9
MCF2-209ENST00000520602 FCRL6Q6DN72 434 aa9.43□□□□□ -0.9
MCF2-209ENST00000520602 MRM1Q6IN84 353 aaKnown RBP9.43□□□□□ -0.9
MCF2-209ENST00000520602 SPATC1Q76KD6 591 aa9.43□□□□□ -0.9
MCF2-209ENST00000520602 LUZP2Q86TE4 346 aa9.43□□□□□ -0.9
MCF2-209ENST00000520602 LSRQ86X29 649 aaPredicted RBP9.43□□□□□ -0.9
MCF2-209ENST00000520602 FAM26EQ8N5C1 309 aa9.43□□□□□ -0.9
MCF2-209ENST00000520602 CHPT1Q8WUD6 406 aa9.43□□□□□ -0.9
MCF2-209ENST00000520602 COQ7Q99807 217 aa9.43□□□□□ -0.9
MCF2-209ENST00000520602 NANSQ9NR45 359 aa9.43□□□□□ -0.9
MCF2-209ENST00000520602 A0A1W2PPC4 97 aa9.43□□□□□ -0.9
MCF2-209ENST00000520602 NR0B1P51843 470 aaKnown RBP9.43□□□□□ -0.9
MCF2-209ENST00000520602 GFERP55789 205 aa9.43□□□□□ -0.9
MCF2-209ENST00000520602 ZSWIM7Q19AV6 140 aa9.43□□□□□ -0.9
MCF2-209ENST00000520602 ARHGAP11BQ3KRB8 267 aa9.43□□□□□ -0.9
MCF2-209ENST00000520602 GDPGP1Q6ZNW5 385 aa9.43□□□□□ -0.9
MCF2-209ENST00000520602 BBS1Q8NFJ9 593 aa9.43□□□□□ -0.9
MCF2-209ENST00000520602 OR4N2Q8NGD1 307 aa9.43□□□□□ -0.9
MCF2-209ENST00000520602 PPP1R14BQ96C90 147 aa9.43□□□□□ -0.9
MCF2-209ENST00000520602 FOLH1BQ9HBA9 442 aa9.43□□□□□ -0.9
MCF2-209ENST00000520602 DIMT1Q9UNQ2 313 aaKnown RBP9.43□□□□□ -0.9
MCF2-209ENST00000520602 A0A1B0GVC2 190 aa9.43□□□□□ -0.9
MCF2-209ENST00000520602 A6NIN4 97 aa9.43□□□□□ -0.9
MCF2-209ENST00000520602 DUX1O43812 170 aa9.43□□□□□ -0.9
MCF2-209ENST00000520602 HYAL3O43820 417 aaPredicted RBP9.43□□□□□ -0.9
MCF2-209ENST00000520602 TSC22D2O75157 780 aa9.43□□□□□ -0.9
MCF2-209ENST00000520602 FPR3P25089 353 aa9.43□□□□□ -0.9
MCF2-209ENST00000520602 GPR143P51810 404 aa9.43□□□□□ -0.9
MCF2-209ENST00000520602 E2F2Q14209 437 aa9.43□□□□□ -0.9
MCF2-209ENST00000520602 TOMM20Q15388 145 aa9.43□□□□□ -0.9
MCF2-209ENST00000520602 OCLNQ16625 522 aa9.43□□□□□ -0.9
MCF2-209ENST00000520602 STEAP3Q658P3 488 aa9.43□□□□□ -0.9
MCF2-209ENST00000520602 PHC2Q8IXK0 858 aa9.43□□□□□ -0.9
MCF2-209ENST00000520602 RBM12BQ8IXT5 1001 aaKnown RBP9.43□□□□□ -0.9
MCF2-209ENST00000520602 CA13Q8N1Q1 262 aa9.43□□□□□ -0.9
MCF2-209ENST00000520602 TOR1AIP2Q8NFQ8 470 aa9.43□□□□□ -0.9
MCF2-209ENST00000520602 TCTN2Q96GX1 697 aa9.43□□□□□ -0.9
MCF2-209ENST00000520602 ADAD1Q96M93 576 aaKnown RBP9.43□□□□□ -0.9
MCF2-209ENST00000520602 WACQ9BTA9 647 aa9.43□□□□□ -0.9
MCF2-209ENST00000520602 CBLCQ9ULV8 474 aa9.43□□□□□ -0.9
MCF2-209ENST00000520602 NCR1O76036 304 aa9.42□□□□□ -0.9
MCF2-209ENST00000520602 MYF5P13349 255 aa9.42□□□□□ -0.9
MCF2-209ENST00000520602 MAPK14Q16539 360 aa9.42□□□□□ -0.9
MCF2-209ENST00000520602 TP53I3Q53FA7 332 aa9.42□□□□□ -0.9
MCF2-209ENST00000520602 PRAMEF8Q5VWM4 474 aa9.42□□□□□ -0.9
MCF2-209ENST00000520602 PRAMEF7Q5VXH5 474 aa9.42□□□□□ -0.9
MCF2-209ENST00000520602 RPL13AP3Q6NVV1 102 aa9.42□□□□□ -0.9
MCF2-209ENST00000520602 LAX1Q8IWV1 398 aa9.42□□□□□ -0.9
MCF2-209ENST00000520602 NANOGP1Q8N7R0 232 aa9.42□□□□□ -0.9
MCF2-209ENST00000520602 SYT14Q8NB59 555 aa9.42□□□□□ -0.9
MCF2-209ENST00000520602 OPALINQ96PE5 141 aa9.42□□□□□ -0.9
MCF2-209ENST00000520602 NRSN2Q9GZP1 204 aa9.42□□□□□ -0.9
MCF2-209ENST00000520602 HINT3Q9NQE9 182 aaKnown RBP9.42□□□□□ -0.9
MCF2-209ENST00000520602 DUSP22Q9NRW4 184 aa9.42□□□□□ -0.9
MCF2-209ENST00000520602 TXNL4BQ9NX01 149 aaKnown RBP9.42□□□□□ -0.9
MCF2-209ENST00000520602 B3GNT3Q9Y2A9 372 aa9.42□□□□□ -0.9
MCF2-209ENST00000520602 ISPDA4D126 451 aa9.42□□□□□ -0.9
MCF2-209ENST00000520602 ARRDC5A6NEK1 342 aa9.42□□□□□ -0.9
MCF2-209ENST00000520602 TRIM64A6NGJ6 449 aa9.42□□□□□ -0.9
MCF2-209ENST00000520602 FBLP22087 321 aaKnown RBP9.42□□□□□ -0.9
MCF2-209ENST00000520602 ERVK-25P63136 954 aa9.42□□□□□ -0.9
MCF2-209ENST00000520602 CRMP1Q14194 572 aa9.42□□□□□ -0.9
MCF2-209ENST00000520602 FZD2Q14332 565 aa9.42□□□□□ -0.9
MCF2-209ENST00000520602 PHF19Q5T6S3 580 aa9.42□□□□□ -0.9
MCF2-209ENST00000520602 PLXDC1Q8IUK5 500 aa9.42□□□□□ -0.9
MCF2-209ENST00000520602 SAMD12Q8N8I0 201 aa9.42□□□□□ -0.9
MCF2-209ENST00000520602 SMAP2Q8WU79 429 aaPredicted RBP9.42□□□□□ -0.9
MCF2-209ENST00000520602 THEM6Q8WUY1 208 aa9.42□□□□□ -0.9
MCF2-209ENST00000520602 GAL3ST1Q99999 423 aa9.42□□□□□ -0.9
MCF2-209ENST00000520602 ARHGEF17Q96PE2 2063 aaPredicted RBP9.42□□□□□ -0.9
MCF2-209ENST00000520602 POLR1CO15160 346 aaPredicted RBP9.42□□□□□ -0.9
MCF2-209ENST00000520602 ATP6V1G1O75348 118 aa9.42□□□□□ -0.9
MCF2-209ENST00000520602 NDUFB2O95178 105 aa9.42□□□□□ -0.9
MCF2-209ENST00000520602 F8A1P23610 371 aa9.42□□□□□ -0.9
MCF2-209ENST00000520602 RORAP35398 523 aa9.42□□□□□ -0.9
MCF2-209ENST00000520602 UGT2B10P36537 528 aa9.42□□□□□ -0.9
MCF2-209ENST00000520602 PLCXD2Q0VAA5 305 aa9.42□□□□□ -0.9
MCF2-209ENST00000520602 C11orf91Q3C1V1 193 aa9.42□□□□□ -0.9
MCF2-209ENST00000520602 ZNF658BQ4V348 819 aaPredicted RBP9.42□□□□□ -0.9
MCF2-209ENST00000520602 WDR45BQ5MNZ6 344 aa9.42□□□□□ -0.9
MCF2-209ENST00000520602 DESI1Q6ICB0 168 aa9.42□□□□□ -0.9
MCF2-209ENST00000520602 MOSPD2Q8NHP6 518 aa9.42□□□□□ -0.9
MCF2-209ENST00000520602 NT5CQ8TCD5 201 aa9.42□□□□□ -0.9
MCF2-209ENST00000520602 GPA33Q99795 319 aa9.42□□□□□ -0.9
MCF2-209ENST00000520602 LRRC61Q9BV99 259 aa9.42□□□□□ -0.9
MCF2-209ENST00000520602 SLIRPQ9GZT3 109 aaKnown RBP9.42□□□□□ -0.9
MCF2-209ENST00000520602 SPRTNQ9H040 489 aaPredicted RBP9.42□□□□□ -0.9
MCF2-209ENST00000520602 OR10A5Q9H207 317 aa9.42□□□□□ -0.9
MCF2-209ENST00000520602 WSB2Q9NYS7 404 aaPredicted RBP9.42□□□□□ -0.9
MCF2-209ENST00000520602 GRHPRQ9UBQ7 328 aa9.42□□□□□ -0.9
MCF2-209ENST00000520602 REV1Q9UBZ9 1251 aa9.42□□□□□ -0.9
MCF2-209ENST00000520602 PCDHGB7Q9Y5F8 929 aa9.42□□□□□ -0.9
MCF2-209ENST00000520602 CDC40O60508 579 aaKnown RBP eCLIP9.41□□□□□ -0.9
MCF2-209ENST00000520602 CTNSO60931 367 aa9.41□□□□□ -0.9
MCF2-209ENST00000520602 KCNK2O95069 426 aa9.41□□□□□ -0.9
MCF2-209ENST00000520602 GRK5P34947 590 aa9.41□□□□□ -0.9
MCF2-209ENST00000520602 SOX2P48431 317 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms