RNA–Protein interactions for RNA: ENST00000516989.1

SCARNA6.1-201, small Cajal body-specific RNA 6, humanhuman

BASIC

Gene SCARNA6, Length 238 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleolus, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA6.1-201ENST00000516989 CLK3P49761 638 aaKnown RBP5.3□□□□□ -1.56
SCARNA6.1-201ENST00000516989 KHKP50053 298 aa5.3□□□□□ -1.56
SCARNA6.1-201ENST00000516989 ANXA11P50995 505 aaKnown RBP5.3□□□□□ -1.56
SCARNA6.1-201ENST00000516989 KCNJ2P63252 427 aa5.3□□□□□ -1.56
SCARNA6.1-201ENST00000516989 PSPHP78330 225 aa5.3□□□□□ -1.56
SCARNA6.1-201ENST00000516989 CD83Q01151 205 aa5.3□□□□□ -1.56
SCARNA6.1-201ENST00000516989 PMP22Q01453 160 aa5.3□□□□□ -1.56
SCARNA6.1-201ENST00000516989 RCAN2Q14206 197 aa5.3□□□□□ -1.56
SCARNA6.1-201ENST00000516989 INPP5JQ15735 1006 aaPredicted RBP5.3□□□□□ -1.56
SCARNA6.1-201ENST00000516989 GPR68Q15743 365 aa5.3□□□□□ -1.56
SCARNA6.1-201ENST00000516989 GPAT3Q53EU6 434 aa5.3□□□□□ -1.56
SCARNA6.1-201ENST00000516989 DCST2Q5T1A1 773 aa5.3□□□□□ -1.56
SCARNA6.1-201ENST00000516989 DDX59Q5T1V6 619 aaKnown RBP eCLIP5.3□□□□□ -1.56
SCARNA6.1-201ENST00000516989 SAXO2Q658L1 398 aa5.3□□□□□ -1.56
SCARNA6.1-201ENST00000516989 SLC30A6Q6NXT4 461 aa5.3□□□□□ -1.56
SCARNA6.1-201ENST00000516989 RPUSD3Q6P087 351 aaKnown RBP5.3□□□□□ -1.56
SCARNA6.1-201ENST00000516989 C16orf62Q7Z3J2 963 aa5.3□□□□□ -1.56
SCARNA6.1-201ENST00000516989 ZNF843Q8N446 348 aa5.3□□□□□ -1.56
SCARNA6.1-201ENST00000516989 POU5F2Q8N7G0 328 aa5.3□□□□□ -1.56
SCARNA6.1-201ENST00000516989 PCYOX1LQ8NBM8 494 aa5.3□□□□□ -1.56
SCARNA6.1-201ENST00000516989 CCDC197Q8NCU1 140 aa5.3□□□□□ -1.56
SCARNA6.1-201ENST00000516989 RP9Q8TA86 221 aaKnown RBP5.3□□□□□ -1.56
SCARNA6.1-201ENST00000516989 CPT1CQ8TCG5 803 aa5.3□□□□□ -1.56
SCARNA6.1-201ENST00000516989 BCAS4Q8TDM0 211 aa5.3□□□□□ -1.56
SCARNA6.1-201ENST00000516989 GRHL3Q8TE85 626 aa5.3□□□□□ -1.56
SCARNA6.1-201ENST00000516989 PAQR8Q8TEZ7 354 aa5.3□□□□□ -1.56
SCARNA6.1-201ENST00000516989 ZFP90Q8TF47 636 aa5.3□□□□□ -1.56
SCARNA6.1-201ENST00000516989 LRTOMTQ8WZ04 291 aa5.3□□□□□ -1.56
SCARNA6.1-201ENST00000516989 HGDQ93099 445 aa5.3□□□□□ -1.56
SCARNA6.1-201ENST00000516989 SNRNP40Q96DI7 357 aaKnown RBP5.3□□□□□ -1.56
SCARNA6.1-201ENST00000516989 AURKBQ96GD4 344 aaPredicted RBP5.3□□□□□ -1.56
SCARNA6.1-201ENST00000516989 LRRC37BQ96QE4 947 aa5.3□□□□□ -1.56
SCARNA6.1-201ENST00000516989 TAAR6Q96RI8 345 aa5.3□□□□□ -1.56
SCARNA6.1-201ENST00000516989 SECISBP2Q96T21 854 aaKnown RBP5.3□□□□□ -1.56
SCARNA6.1-201ENST00000516989 FAM173AQ9BQD7 235 aa5.3□□□□□ -1.56
SCARNA6.1-201ENST00000516989 DOHHQ9BU89 302 aa5.3□□□□□ -1.56
SCARNA6.1-201ENST00000516989 THUMPD3Q9BV44 507 aaKnown RBP5.3□□□□□ -1.56
SCARNA6.1-201ENST00000516989 CCDC106Q9BWC9 280 aa5.3□□□□□ -1.56
SCARNA6.1-201ENST00000516989 PAIP1Q9H074 479 aaKnown RBP5.3□□□□□ -1.56
SCARNA6.1-201ENST00000516989 RAD21L1Q9H4I0 556 aa5.3□□□□□ -1.56
SCARNA6.1-201ENST00000516989 SH2D2AQ9NP31 389 aa5.3□□□□□ -1.56
SCARNA6.1-201ENST00000516989 SLC52A3Q9NQ40 469 aa5.3□□□□□ -1.56
SCARNA6.1-201ENST00000516989 DUSP22Q9NRW4 184 aa5.3□□□□□ -1.56
SCARNA6.1-201ENST00000516989 AGPAT4Q9NRZ5 378 aa5.3□□□□□ -1.56
SCARNA6.1-201ENST00000516989 SLC6A13Q9NSD5 602 aa5.3□□□□□ -1.56
SCARNA6.1-201ENST00000516989 OLAHQ9NV23 265 aa5.3□□□□□ -1.56
SCARNA6.1-201ENST00000516989 ASF1BQ9NVP2 202 aa5.3□□□□□ -1.56
SCARNA6.1-201ENST00000516989 FBXO34Q9NWN3 711 aa5.3□□□□□ -1.56
SCARNA6.1-201ENST00000516989 GIN1Q9NXP7 522 aa5.3□□□□□ -1.56
SCARNA6.1-201ENST00000516989 TUBA8Q9NY65 449 aaPredicted RBP5.3□□□□□ -1.56
SCARNA6.1-201ENST00000516989 VAPAQ9P0L0 249 aa5.3□□□□□ -1.56
SCARNA6.1-201ENST00000516989 MAGEL2Q9UJ55 1249 aa5.3□□□□□ -1.56
SCARNA6.1-201ENST00000516989 CNOT11Q9UKZ1 510 aaKnown RBP5.3□□□□□ -1.56
SCARNA6.1-201ENST00000516989 NPIPA1Q9UND3 350 aa5.3□□□□□ -1.56
SCARNA6.1-201ENST00000516989 PLA2G2DQ9UNK4 145 aa5.3□□□□□ -1.56
SCARNA6.1-201ENST00000516989 CHCHD2Q9Y6H1 151 aaPredicted RBP5.3□□□□□ -1.56
SCARNA6.1-201ENST00000516989 SEC23IPQ9Y6Y8 1000 aaKnown RBP5.3□□□□□ -1.56
SCARNA6.1-201ENST00000516989 PIEZO2Q9H5I5 2752 aa5.3□□□□□ -1.56
SCARNA6.1-201ENST00000516989 MGAQ8IWI9 3026 aa5.29□□□□□ -1.56
SCARNA6.1-201ENST00000516989 COL6A6A6NMZ7 2263 aa5.29□□□□□ -1.56
SCARNA6.1-201ENST00000516989 NPIPA5A0A0B4J1W7 369 aa5.29□□□□□ -1.56
SCARNA6.1-201ENST00000516989 A0A0G2JMM0 328 aa5.29□□□□□ -1.56
SCARNA6.1-201ENST00000516989 A0A1W2PPB8 328 aa5.29□□□□□ -1.56
SCARNA6.1-201ENST00000516989 A0A1W2PRS3 328 aa5.29□□□□□ -1.56
SCARNA6.1-201ENST00000516989 PINLYPA6NC86 204 aa5.29□□□□□ -1.56
SCARNA6.1-201ENST00000516989 OR14I1A6ND48 311 aa5.29□□□□□ -1.56
SCARNA6.1-201ENST00000516989 ASPDHA6ND91 283 aa5.29□□□□□ -1.56
SCARNA6.1-201ENST00000516989 TMEM247A6NEH6 219 aa5.29□□□□□ -1.56
SCARNA6.1-201ENST00000516989 FAM166BA8MTA8 275 aa5.29□□□□□ -1.56
SCARNA6.1-201ENST00000516989 KIR3DP1A8MWS1 328 aa5.29□□□□□ -1.56
SCARNA6.1-201ENST00000516989 NPIPA7E9PJI5 369 aa5.29□□□□□ -1.56
SCARNA6.1-201ENST00000516989 HMGN4O00479 90 aa5.29□□□□□ -1.56
SCARNA6.1-201ENST00000516989 FBP2O00757 339 aa5.29□□□□□ -1.56
SCARNA6.1-201ENST00000516989 NDUFAB1O14561 156 aa5.29□□□□□ -1.56
SCARNA6.1-201ENST00000516989 MRASO14807 208 aa5.29□□□□□ -1.56
SCARNA6.1-201ENST00000516989 AIM2O14862 343 aa5.29□□□□□ -1.56
SCARNA6.1-201ENST00000516989 SLC22A2O15244 555 aa5.29□□□□□ -1.56
SCARNA6.1-201ENST00000516989 SCO2O43819 266 aa5.29□□□□□ -1.56
SCARNA6.1-201ENST00000516989 SLC28A2O43868 658 aa5.29□□□□□ -1.56
SCARNA6.1-201ENST00000516989 FCMRO60667 390 aa5.29□□□□□ -1.56
SCARNA6.1-201ENST00000516989 ICOSLGO75144 302 aa5.29□□□□□ -1.56
SCARNA6.1-201ENST00000516989 TRAPPC6AO75865 159 aa5.29□□□□□ -1.56
SCARNA6.1-201ENST00000516989 DCTN3O75935 186 aa5.29□□□□□ -1.56
SCARNA6.1-201ENST00000516989 C1QL1O75973 258 aa5.29□□□□□ -1.56
SCARNA6.1-201ENST00000516989 PDE9AO76083 593 aa5.29□□□□□ -1.56
SCARNA6.1-201ENST00000516989 SORBS2O94875 1100 aaKnown RBP5.29□□□□□ -1.56
SCARNA6.1-201ENST00000516989 SNX4O95219 450 aa5.29□□□□□ -1.56
SCARNA6.1-201ENST00000516989 UTS2O95399 124 aa5.29□□□□□ -1.56
SCARNA6.1-201ENST00000516989 IL18BPO95998 194 aa5.29□□□□□ -1.56
SCARNA6.1-201ENST00000516989 IGKV1D-16P01601 117 aa5.29□□□□□ -1.56
SCARNA6.1-201ENST00000516989 NPIPA8P0DM63 369 aa5.29□□□□□ -1.56
SCARNA6.1-201ENST00000516989 NR2F1P10589 423 aa5.29□□□□□ -1.56
SCARNA6.1-201ENST00000516989 COX4I1P13073 169 aa5.29□□□□□ -1.56
SCARNA6.1-201ENST00000516989 ETFAP13804 333 aa5.29□□□□□ -1.56
SCARNA6.1-201ENST00000516989 PPIBP23284 216 aaKnown RBP5.29□□□□□ -1.56
SCARNA6.1-201ENST00000516989 PTPN6P29350 595 aa5.29□□□□□ -1.56
SCARNA6.1-201ENST00000516989 EVI2BP34910 448 aa5.29□□□□□ -1.56
SCARNA6.1-201ENST00000516989 MAN2A2P49641 1150 aa5.29□□□□□ -1.56
SCARNA6.1-201ENST00000516989 DSTNP60981 165 aa5.29□□□□□ -1.56
SCARNA6.1-201ENST00000516989 PPIAP62937 165 aaKnown RBP5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms