RNA–Protein interactions for RNA: ENST00000514987.5

NUP54-217, Transcript of nucleoporin 54, humanhuman

TSL 2 BASIC

Gene NUP54, Length 1,563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-217ENST00000514987 PTP4A3O75365 173 aa13.74□□□□□ -0.21
NUP54-217ENST00000514987 SLC2A10O95528 541 aa13.74□□□□□ -0.21
NUP54-217ENST00000514987 SAGP10523 405 aaPredicted RBP13.74□□□□□ -0.21
NUP54-217ENST00000514987 SPNP16150 400 aa13.74□□□□□ -0.21
NUP54-217ENST00000514987 TYRP1P17643 537 aa13.74□□□□□ -0.21
NUP54-217ENST00000514987 HK1P19367 917 aa13.74□□□□□ -0.21
NUP54-217ENST00000514987 CELP19835 753 aa13.74□□□□□ -0.21
NUP54-217ENST00000514987 S1PR1P21453 382 aa13.74□□□□□ -0.21
NUP54-217ENST00000514987 SLC6A6P31641 620 aa13.74□□□□□ -0.21
NUP54-217ENST00000514987 ACTC1P68032 377 aa13.74□□□□□ -0.21
NUP54-217ENST00000514987 ACTA1P68133 377 aa13.74□□□□□ -0.21
NUP54-217ENST00000514987 FOXK2Q01167 660 aa13.74□□□□□ -0.21
NUP54-217ENST00000514987 POU4F2Q12837 409 aa13.74□□□□□ -0.21
NUP54-217ENST00000514987 ASAH1Q13510 395 aa13.74□□□□□ -0.21
NUP54-217ENST00000514987 FAM53BQ14153 422 aa13.74□□□□□ -0.21
NUP54-217ENST00000514987 GALEQ14376 348 aa13.74□□□□□ -0.21
NUP54-217ENST00000514987 ELOCQ15369 112 aa13.74□□□□□ -0.21
NUP54-217ENST00000514987 ZNF141Q15928 474 aa13.74□□□□□ -0.21
NUP54-217ENST00000514987 ZNF79Q15937 498 aa13.74□□□□□ -0.21
NUP54-217ENST00000514987 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.74□□□□□ -0.21
NUP54-217ENST00000514987 RTL4Q6ZR62 310 aa13.74□□□□□ -0.21
NUP54-217ENST00000514987 PRR23CQ6ZRP0 262 aa13.74□□□□□ -0.21
NUP54-217ENST00000514987 OR51G2Q8NGK0 314 aa13.74□□□□□ -0.21
NUP54-217ENST00000514987 ACOT12Q8WYK0 555 aa13.74□□□□□ -0.21
NUP54-217ENST00000514987 OTULINQ96BN8 352 aa13.74□□□□□ -0.21
NUP54-217ENST00000514987 DIRAS2Q96HU8 199 aa13.74□□□□□ -0.21
NUP54-217ENST00000514987 ZNF426Q9BUY5 554 aa13.74□□□□□ -0.21
NUP54-217ENST00000514987 GPR174Q9BXC1 333 aa13.74□□□□□ -0.21
NUP54-217ENST00000514987 MIXL1Q9H2W2 232 aa13.74□□□□□ -0.21
NUP54-217ENST00000514987 Q9N2J8 555 aa13.74□□□□□ -0.21
NUP54-217ENST00000514987 FAM60AQ9NP50 221 aa13.74□□□□□ -0.21
NUP54-217ENST00000514987 C14orf119Q9NWQ9 140 aa13.74□□□□□ -0.21
NUP54-217ENST00000514987 TBC1D24Q9ULP9 559 aa13.74□□□□□ -0.21
NUP54-217ENST00000514987 NPIPA5A0A0B4J1W7 369 aa13.73□□□□□ -0.21
NUP54-217ENST00000514987 DAPL1A0PJW8 107 aa13.73□□□□□ -0.21
NUP54-217ENST00000514987 NPIPA7E9PJI5 369 aa13.73□□□□□ -0.21
NUP54-217ENST00000514987 DYRK3O43781 588 aa13.73□□□□□ -0.21
NUP54-217ENST00000514987 TMCC2O75069 709 aa13.73□□□□□ -0.21
NUP54-217ENST00000514987 RGS9O75916 674 aaPredicted RBP13.73□□□□□ -0.21
NUP54-217ENST00000514987 NSA2O95478 260 aaKnown RBP13.73□□□□□ -0.21
NUP54-217ENST00000514987 CELA2BP08218 269 aaPredicted RBP13.73□□□□□ -0.21
NUP54-217ENST00000514987 CLEC2LP0C7M8 214 aa13.73□□□□□ -0.21
NUP54-217ENST00000514987 NPIPA8P0DM63 369 aa13.73□□□□□ -0.21
NUP54-217ENST00000514987 PEPDP12955 493 aa13.73□□□□□ -0.21
NUP54-217ENST00000514987 IL7P13232 177 aa13.73□□□□□ -0.21
NUP54-217ENST00000514987 ZNF3P17036 446 aa13.73□□□□□ -0.21
NUP54-217ENST00000514987 F8A1P23610 371 aa13.73□□□□□ -0.21
NUP54-217ENST00000514987 GALNSP34059 522 aa13.73□□□□□ -0.21
NUP54-217ENST00000514987 FASLGP48023 281 aa13.73□□□□□ -0.21
NUP54-217ENST00000514987 EMDP50402 254 aa13.73□□□□□ -0.21
NUP54-217ENST00000514987 FXYD6P3P58550 94 aa13.73□□□□□ -0.21
NUP54-217ENST00000514987 PSG6Q00889 435 aa13.73□□□□□ -0.21
NUP54-217ENST00000514987 ZNF791Q3KP31 576 aaPredicted RBP13.73□□□□□ -0.21
NUP54-217ENST00000514987 ZNF542PQ5EBM4 170 aa13.73□□□□□ -0.21
NUP54-217ENST00000514987 ARHGAP11AQ6P4F7 1023 aa13.73□□□□□ -0.21
NUP54-217ENST00000514987 ULK3Q6PHR2 472 aa13.73□□□□□ -0.21
NUP54-217ENST00000514987 SYT13Q7L8C5 426 aa13.73□□□□□ -0.21
NUP54-217ENST00000514987 MARCH9Q86YJ5 346 aa13.73□□□□□ -0.21
NUP54-217ENST00000514987 KLBQ86Z14 1044 aa13.73□□□□□ -0.21
NUP54-217ENST00000514987 ZNF440Q8IYI8 595 aa13.73□□□□□ -0.21
NUP54-217ENST00000514987 SIRT6Q8N6T7 355 aa13.73□□□□□ -0.21
NUP54-217ENST00000514987 CNOT9Q92600 299 aaKnown RBP13.73□□□□□ -0.21
NUP54-217ENST00000514987 DGAT2Q96PD7 388 aa13.73□□□□□ -0.21
NUP54-217ENST00000514987 ALG8Q9BVK2 526 aa13.73□□□□□ -0.21
NUP54-217ENST00000514987 SLC22A4Q9H015 551 aa13.73□□□□□ -0.21
NUP54-217ENST00000514987 TRIM36Q9NQ86 728 aa13.73□□□□□ -0.21
NUP54-217ENST00000514987 SLC2A4RGQ9NR83 387 aa13.73□□□□□ -0.21
NUP54-217ENST00000514987 PRTFDC1Q9NRG1 225 aa13.73□□□□□ -0.21
NUP54-217ENST00000514987 STARD5Q9NSY2 213 aa13.73□□□□□ -0.21
NUP54-217ENST00000514987 C20orf141Q9NUB4 165 aa13.73□□□□□ -0.21
NUP54-217ENST00000514987 HAO2Q9NYQ3 351 aa13.73□□□□□ -0.21
NUP54-217ENST00000514987 IL20RAQ9UHF4 553 aa13.73□□□□□ -0.21
NUP54-217ENST00000514987 MUTYHQ9UIF7 546 aa13.73□□□□□ -0.21
NUP54-217ENST00000514987 YARS2Q9Y2Z4 477 aaKnown RBP13.73□□□□□ -0.21
NUP54-217ENST00000514987 A0A1B0GWA3 101 aa13.72□□□□□ -0.21
NUP54-217ENST00000514987 LILRA5A6NI73 299 aa13.72□□□□□ -0.21
NUP54-217ENST00000514987 SLC9B1P1A6NJY1 282 aa13.72□□□□□ -0.21
NUP54-217ENST00000514987 EFCAB7A8K855 629 aa13.72□□□□□ -0.21
NUP54-217ENST00000514987 C12orf71A8MTZ7 269 aa13.72□□□□□ -0.21
NUP54-217ENST00000514987 B4DGG1 531 aa13.72□□□□□ -0.21
NUP54-217ENST00000514987 CHURC1-FNTBB4DL54 471 aa13.72□□□□□ -0.21
NUP54-217ENST00000514987 GABRPO00591 440 aa13.72□□□□□ -0.21
NUP54-217ENST00000514987 POLR1CO15160 346 aaPredicted RBP13.72□□□□□ -0.21
NUP54-217ENST00000514987 ZNF749O43361 778 aa13.72□□□□□ -0.21
NUP54-217ENST00000514987 LALBAP00709 142 aa13.72□□□□□ -0.21
NUP54-217ENST00000514987 MT-ND5P03915 603 aa13.72□□□□□ -0.21
NUP54-217ENST00000514987 CD79BP40259 229 aa13.72□□□□□ -0.21
NUP54-217ENST00000514987 MTNR1BP49286 362 aa13.72□□□□□ -0.21
NUP54-217ENST00000514987 GPR143P51810 404 aa13.72□□□□□ -0.21
NUP54-217ENST00000514987 PPP1CAP62136 330 aa13.72□□□□□ -0.21
NUP54-217ENST00000514987 SELENBP1Q13228 472 aa13.72□□□□□ -0.21
NUP54-217ENST00000514987 C1orf61Q13536 156 aa13.72□□□□□ -0.21
NUP54-217ENST00000514987 FGFBP1Q14512 234 aa13.72□□□□□ -0.21
NUP54-217ENST00000514987 AGAP6Q5VW22 663 aa13.72□□□□□ -0.21
NUP54-217ENST00000514987 ZNF544Q6NX49 715 aa13.72□□□□□ -0.21
NUP54-217ENST00000514987 OAFQ86UD1 273 aa13.72□□□□□ -0.21
NUP54-217ENST00000514987 GKN2Q86XP6 184 aa13.72□□□□□ -0.21
NUP54-217ENST00000514987 SLC37A3Q8NCC5 494 aa13.72□□□□□ -0.21
NUP54-217ENST00000514987 IL17RDQ8NFM7 739 aa13.72□□□□□ -0.21
NUP54-217ENST00000514987 OR13C2Q8NGS9 318 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms