RNA–Protein interactions for RNA: ENST00000514743.5

PDLIM5-219, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 3,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-219ENST00000514743 LYVE1Q9Y5Y7 322 aa6.99□□□□□ -1.29
PDLIM5-219ENST00000514743 TRAV19A0A0A6YYK7 116 aa6.99□□□□□ -1.29
PDLIM5-219ENST00000514743 RNF13O43567 381 aa6.99□□□□□ -1.29
PDLIM5-219ENST00000514743 DOK2O60496 412 aa6.99□□□□□ -1.29
PDLIM5-219ENST00000514743 MOSPD3O75425 235 aa6.99□□□□□ -1.29
PDLIM5-219ENST00000514743 STK16O75716 305 aa6.99□□□□□ -1.29
PDLIM5-219ENST00000514743 LPLP06858 475 aa6.99□□□□□ -1.29
PDLIM5-219ENST00000514743 C8AP07357 584 aa6.99□□□□□ -1.29
PDLIM5-219ENST00000514743 ITGAMP11215 1152 aa6.99□□□□□ -1.29
PDLIM5-219ENST00000514743 CPN2P22792 545 aa6.99□□□□□ -1.29
PDLIM5-219ENST00000514743 RPS9P46781 194 aaKnown RBP6.99□□□□□ -1.29
PDLIM5-219ENST00000514743 SPINT3P49223 89 aa6.99□□□□□ -1.29
PDLIM5-219ENST00000514743 STARD6P59095 220 aa6.99□□□□□ -1.29
PDLIM5-219ENST00000514743 UBE2G2P60604 165 aa6.99□□□□□ -1.29
PDLIM5-219ENST00000514743 CXCR4P61073 352 aa6.99□□□□□ -1.29
PDLIM5-219ENST00000514743 BLOC1S1P78537 153 aa6.99□□□□□ -1.29
PDLIM5-219ENST00000514743 GGTA1PQ4G0N0 100 aa6.99□□□□□ -1.29
PDLIM5-219ENST00000514743 ZNF311Q5JNZ3 666 aa6.99□□□□□ -1.29
PDLIM5-219ENST00000514743 PRAMEF14Q5SWL7 426 aa6.99□□□□□ -1.29
PDLIM5-219ENST00000514743 TMEM215Q68D42 235 aa6.99□□□□□ -1.29
PDLIM5-219ENST00000514743 ENPP6Q6UWR7 440 aa6.99□□□□□ -1.29
PDLIM5-219ENST00000514743 IQCHQ86VS3 1027 aa6.99□□□□□ -1.29
PDLIM5-219ENST00000514743 TMEM25Q86YD3 366 aa6.99□□□□□ -1.29
PDLIM5-219ENST00000514743 NLGN4YQ8NFZ3 816 aaPredicted RBP6.99□□□□□ -1.29
PDLIM5-219ENST00000514743 OR1N1Q8NGS0 311 aa6.99□□□□□ -1.29
PDLIM5-219ENST00000514743 PHYHIPQ92561 330 aa6.99□□□□□ -1.29
PDLIM5-219ENST00000514743 MUS81Q96NY9 551 aa6.99□□□□□ -1.29
PDLIM5-219ENST00000514743 COPS8Q99627 209 aa6.99□□□□□ -1.29
PDLIM5-219ENST00000514743 SAP130Q9H0E3 1048 aa6.99□□□□□ -1.29
PDLIM5-219ENST00000514743 SLC32A1Q9H598 525 aa6.99□□□□□ -1.29
PDLIM5-219ENST00000514743 ZDHHC6Q9H6R6 413 aa6.99□□□□□ -1.29
PDLIM5-219ENST00000514743 LRTM1Q9HBL6 345 aa6.99□□□□□ -1.29
PDLIM5-219ENST00000514743 MED9Q9NWA0 146 aa6.99□□□□□ -1.29
PDLIM5-219ENST00000514743 METTL1Q9UBP6 276 aaKnown RBP6.99□□□□□ -1.29
PDLIM5-219ENST00000514743 B4GALT6Q9UBX8 382 aa6.99□□□□□ -1.29
PDLIM5-219ENST00000514743 CD84Q9UIB8 345 aa6.99□□□□□ -1.29
PDLIM5-219ENST00000514743 COL4A3Q01955 1670 aa6.98□□□□□ -1.29
PDLIM5-219ENST00000514743 TCF20Q9UGU0 1960 aaKnown RBP6.98□□□□□ -1.29
PDLIM5-219ENST00000514743 PGRMC2O15173 223 aa6.98□□□□□ -1.29
PDLIM5-219ENST00000514743 TULP3O75386 442 aa6.98□□□□□ -1.29
PDLIM5-219ENST00000514743 SEC22BO75396 215 aa6.98□□□□□ -1.29
PDLIM5-219ENST00000514743 MTX2O75431 263 aa6.98□□□□□ -1.29
PDLIM5-219ENST00000514743 BCKDHAP12694 445 aa6.98□□□□□ -1.29
PDLIM5-219ENST00000514743 DTYMKP23919 212 aa6.98□□□□□ -1.29
PDLIM5-219ENST00000514743 PRPH2P23942 346 aa6.98□□□□□ -1.29
PDLIM5-219ENST00000514743 CRHBPP24387 322 aa6.98□□□□□ -1.29
PDLIM5-219ENST00000514743 HTR5AP47898 357 aa6.98□□□□□ -1.29
PDLIM5-219ENST00000514743 ARHGEF7Q14155 803 aa6.98□□□□□ -1.29
PDLIM5-219ENST00000514743 RNASE10Q5GAN6 216 aaKnown RBP6.98□□□□□ -1.29
PDLIM5-219ENST00000514743 RNLSQ5VYX0 342 aa6.98□□□□□ -1.29
PDLIM5-219ENST00000514743 RGS7BPQ6MZT1 257 aaPredicted RBP6.98□□□□□ -1.29
PDLIM5-219ENST00000514743 ZC3H14Q6PJT7 736 aaKnown RBP6.98□□□□□ -1.29
PDLIM5-219ENST00000514743 SERPINA13PQ6UXR4 307 aa6.98□□□□□ -1.29
PDLIM5-219ENST00000514743 UBE2R2Q712K3 238 aaPredicted RBP6.98□□□□□ -1.29
PDLIM5-219ENST00000514743 HSD17B13Q7Z5P4 300 aaPredicted RBP6.98□□□□□ -1.29
PDLIM5-219ENST00000514743 ADIPOR2Q86V24 386 aa6.98□□□□□ -1.29
PDLIM5-219ENST00000514743 PIP4P2Q8N4L2 257 aa6.98□□□□□ -1.29
PDLIM5-219ENST00000514743 RXFP4Q8TDU9 374 aa6.98□□□□□ -1.29
PDLIM5-219ENST00000514743 ZDHHC1Q8WTX9 485 aa6.98□□□□□ -1.29
PDLIM5-219ENST00000514743 ASB11Q8WXH4 323 aa6.98□□□□□ -1.29
PDLIM5-219ENST00000514743 NODALQ96S42 347 aa6.98□□□□□ -1.29
PDLIM5-219ENST00000514743 C7orf50Q9BRJ6 194 aaKnown RBP6.98□□□□□ -1.29
PDLIM5-219ENST00000514743 SARGQ9BW04 601 aa6.98□□□□□ -1.29
PDLIM5-219ENST00000514743 SLC12A9Q9BXP2 914 aa6.98□□□□□ -1.29
PDLIM5-219ENST00000514743 TCF7L1Q9HCS4 588 aa6.98□□□□□ -1.29
PDLIM5-219ENST00000514743 DZANK1Q9NVP4 752 aa6.98□□□□□ -1.29
PDLIM5-219ENST00000514743 FAM118AQ9NWS6 357 aa6.98□□□□□ -1.29
PDLIM5-219ENST00000514743 IL20RAQ9UHF4 553 aa6.98□□□□□ -1.29
PDLIM5-219ENST00000514743 PPT2Q9UMR5 302 aa6.98□□□□□ -1.29
PDLIM5-219ENST00000514743 CLCA2Q9UQC9 943 aa6.98□□□□□ -1.29
PDLIM5-219ENST00000514743 A0A1W2PQ09 198 aa6.98□□□□□ -1.29
PDLIM5-219ENST00000514743 TMEM200CA6NKL6 621 aa6.98□□□□□ -1.29
PDLIM5-219ENST00000514743 GFYI3L273 518 aa6.98□□□□□ -1.29
PDLIM5-219ENST00000514743 M0QZK8 103 aa6.98□□□□□ -1.29
PDLIM5-219ENST00000514743 SURF4O15260 269 aa6.98□□□□□ -1.29
PDLIM5-219ENST00000514743 TCF21O43680 179 aa6.98□□□□□ -1.29
PDLIM5-219ENST00000514743 BNIP3LO60238 219 aa6.98□□□□□ -1.29
PDLIM5-219ENST00000514743 CLDN9O95484 217 aa6.98□□□□□ -1.29
PDLIM5-219ENST00000514743 LDLRP01130 860 aa6.98□□□□□ -1.29
PDLIM5-219ENST00000514743 C1QCP02747 245 aa6.98□□□□□ -1.29
PDLIM5-219ENST00000514743 ANXA5P08758 320 aa6.98□□□□□ -1.29
PDLIM5-219ENST00000514743 RAP2AP10114 183 aa6.98□□□□□ -1.29
PDLIM5-219ENST00000514743 TACR1P25103 407 aa6.98□□□□□ -1.29
PDLIM5-219ENST00000514743 NRIP1P48552 1158 aa6.98□□□□□ -1.29
PDLIM5-219ENST00000514743 CTSCP53634 463 aa6.98□□□□□ -1.29
PDLIM5-219ENST00000514743 CHIT1Q13231 466 aa6.98□□□□□ -1.29
PDLIM5-219ENST00000514743 MAD2L1Q13257 205 aaPredicted RBP6.98□□□□□ -1.29
PDLIM5-219ENST00000514743 LARS2Q15031 903 aaKnown RBP6.98□□□□□ -1.29
PDLIM5-219ENST00000514743 TTLL9Q3SXZ7 439 aa6.98□□□□□ -1.29
PDLIM5-219ENST00000514743 CARD16Q5EG05 197 aa6.98□□□□□ -1.29
PDLIM5-219ENST00000514743 LRIF1Q5T3J3 769 aa6.98□□□□□ -1.29
PDLIM5-219ENST00000514743 Q6ZVU0 165 aa6.98□□□□□ -1.29
PDLIM5-219ENST00000514743 CALHM3Q86XJ0 350 aa6.98□□□□□ -1.29
PDLIM5-219ENST00000514743 CATSPERDQ86XM0 798 aa6.98□□□□□ -1.29
PDLIM5-219ENST00000514743 EIF4E3Q8N5X7 224 aaKnown RBP6.98□□□□□ -1.29
PDLIM5-219ENST00000514743 OR52E4Q8NGH9 312 aa6.98□□□□□ -1.29
PDLIM5-219ENST00000514743 OR2A12Q8NGT7 310 aa6.98□□□□□ -1.29
PDLIM5-219ENST00000514743 OR10A6Q8NH74 314 aa6.98□□□□□ -1.29
PDLIM5-219ENST00000514743 COQ8AQ8NI60 647 aa6.98□□□□□ -1.29
PDLIM5-219ENST00000514743 ITFG1Q8TB96 612 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms