RNA–Protein interactions for RNA: ENST00000513341.5

PDLIM5-218, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-218ENST00000513341 TAGAPQ8N103 731 aa3.24□□□□□ -1.89
PDLIM5-218ENST00000513341 PPFIBP2Q8ND30 876 aa3.24□□□□□ -1.89
PDLIM5-218ENST00000513341 ZNF540Q8NDQ6 660 aa3.24□□□□□ -1.89
PDLIM5-218ENST00000513341 MCUQ8NE86 351 aa3.24□□□□□ -1.89
PDLIM5-218ENST00000513341 SLC2A12Q8TD20 617 aa3.24□□□□□ -1.89
PDLIM5-218ENST00000513341 LKAAEAR1Q8TD35 194 aa3.24□□□□□ -1.89
PDLIM5-218ENST00000513341 C10orf105Q8TEF2 133 aa3.24□□□□□ -1.89
PDLIM5-218ENST00000513341 ZNF721Q8TF20 911 aa3.24□□□□□ -1.89
PDLIM5-218ENST00000513341 RBM18Q96H35 190 aaKnown RBP3.24□□□□□ -1.89
PDLIM5-218ENST00000513341 ZC3HAV1LQ96H79 300 aaKnown RBP3.24□□□□□ -1.89
PDLIM5-218ENST00000513341 SENP5Q96HI0 755 aaPredicted RBP3.24□□□□□ -1.89
PDLIM5-218ENST00000513341 ZNF845Q96IR2 970 aaPredicted RBP3.24□□□□□ -1.89
PDLIM5-218ENST00000513341 FAR2Q96K12 515 aa3.24□□□□□ -1.89
PDLIM5-218ENST00000513341 JSRP1Q96MG2 331 aaPredicted RBP3.24□□□□□ -1.89
PDLIM5-218ENST00000513341 BIRC8Q96P09 236 aa3.24□□□□□ -1.89
PDLIM5-218ENST00000513341 PIGQQ9BRB3 760 aa3.24□□□□□ -1.89
PDLIM5-218ENST00000513341 TRAF4Q9BUZ4 470 aaPredicted RBP3.24□□□□□ -1.89
PDLIM5-218ENST00000513341 RBM4Q9BWF3 364 aaKnown RBP3.24□□□□□ -1.89
PDLIM5-218ENST00000513341 OR8D2Q9GZM6 311 aa3.24□□□□□ -1.89
PDLIM5-218ENST00000513341 ZNHIT6Q9NWK9 470 aaKnown RBP3.24□□□□□ -1.89
PDLIM5-218ENST00000513341 ZNF148Q9UQR1 794 aa3.24□□□□□ -1.89
PDLIM5-218ENST00000513341 B3GALT5Q9Y2C3 310 aa3.24□□□□□ -1.89
PDLIM5-218ENST00000513341 C15orf41Q9Y2V0 281 aa3.24□□□□□ -1.89
PDLIM5-218ENST00000513341 MAGED1Q9Y5V3 778 aaPredicted RBP3.24□□□□□ -1.89
PDLIM5-218ENST00000513341 WIF1Q9Y5W5 379 aa3.24□□□□□ -1.89
PDLIM5-218ENST00000513341 WNK1Q9H4A3 2382 aa3.24□□□□□ -1.89
PDLIM5-218ENST00000513341 PRKDCP78527 4128 aaKnown RBP3.24□□□□□ -1.89
PDLIM5-218ENST00000513341 hCG_1818297A0A087WSY0 165 aa3.23□□□□□ -1.89
PDLIM5-218ENST00000513341 IQANK1A0A1B0GTG1 560 aa3.23□□□□□ -1.89
PDLIM5-218ENST00000513341 KRT87PA6NCN2 255 aa3.23□□□□□ -1.89
PDLIM5-218ENST00000513341 SLC22A20A6NK97 555 aa3.23□□□□□ -1.89
PDLIM5-218ENST00000513341 OR6C76A6NM76 312 aa3.23□□□□□ -1.89
PDLIM5-218ENST00000513341 EFCAB8A8MWE9 144 aa3.23□□□□□ -1.89
PDLIM5-218ENST00000513341 H0Y3Z8 333 aa3.23□□□□□ -1.89
PDLIM5-218ENST00000513341 AP3B1O00203 1094 aa3.23□□□□□ -1.89
PDLIM5-218ENST00000513341 PLOD2O00469 737 aa3.23□□□□□ -1.89
PDLIM5-218ENST00000513341 PIP5K1BO14986 540 aa3.23□□□□□ -1.89
PDLIM5-218ENST00000513341 PSTPIP1O43586 416 aa3.23□□□□□ -1.89
PDLIM5-218ENST00000513341 KIAA0513O60268 411 aa3.23□□□□□ -1.89
PDLIM5-218ENST00000513341 NDUFS7O75251 213 aa3.23□□□□□ -1.89
PDLIM5-218ENST00000513341 SYF2O95926 243 aaKnown RBP3.23□□□□□ -1.89
PDLIM5-218ENST00000513341 TGM6O95932 706 aa3.23□□□□□ -1.89
PDLIM5-218ENST00000513341 TGFAP01135 160 aa3.23□□□□□ -1.89
PDLIM5-218ENST00000513341 CD8AP01732 235 aa3.23□□□□□ -1.89
PDLIM5-218ENST00000513341 IGKV3-11P04433 115 aa3.23□□□□□ -1.89
PDLIM5-218ENST00000513341 HIST1H2AGP0C0S8 130 aaPredicted RBP3.23□□□□□ -1.89
PDLIM5-218ENST00000513341 RHOXF2BP0C7M4 288 aa3.23□□□□□ -1.89
PDLIM5-218ENST00000513341 PEPDP12955 493 aa3.23□□□□□ -1.89
PDLIM5-218ENST00000513341 COX7A2P14406 83 aa3.23□□□□□ -1.89
PDLIM5-218ENST00000513341 ZNF708P17019 499 aa3.23□□□□□ -1.89
PDLIM5-218ENST00000513341 PSMB1P20618 241 aaKnown RBP3.23□□□□□ -1.89
PDLIM5-218ENST00000513341 HIST1H2ADP20671 130 aa3.23□□□□□ -1.89
PDLIM5-218ENST00000513341 GALNSP34059 522 aa3.23□□□□□ -1.89
PDLIM5-218ENST00000513341 SERPINF1P36955 418 aa3.23□□□□□ -1.89
PDLIM5-218ENST00000513341 SRP14P37108 136 aaKnown RBP3.23□□□□□ -1.89
PDLIM5-218ENST00000513341 CASP3P42574 277 aa3.23□□□□□ -1.89
PDLIM5-218ENST00000513341 MSH2P43246 934 aa3.23□□□□□ -1.89
PDLIM5-218ENST00000513341 RAB8AP61006 207 aa3.23□□□□□ -1.89
PDLIM5-218ENST00000513341 STXBP1P61764 594 aaKnown RBP3.23□□□□□ -1.89
PDLIM5-218ENST00000513341 ACTG1P63261 375 aa3.23□□□□□ -1.89
PDLIM5-218ENST00000513341 CCZ1BP86790 482 aa3.23□□□□□ -1.89
PDLIM5-218ENST00000513341 CCZ1P86791 482 aaPredicted RBP3.23□□□□□ -1.89
PDLIM5-218ENST00000513341 CFHR3Q02985 330 aa3.23□□□□□ -1.89
PDLIM5-218ENST00000513341 ZNF91Q05481 1191 aa3.23□□□□□ -1.89
PDLIM5-218ENST00000513341 RUNX2Q13950 521 aa3.23□□□□□ -1.89
PDLIM5-218ENST00000513341 CBFBQ13951 182 aa3.23□□□□□ -1.89
PDLIM5-218ENST00000513341 KCNJ11Q14654 390 aa3.23□□□□□ -1.89
PDLIM5-218ENST00000513341 RPS6KA2Q15349 733 aa3.23□□□□□ -1.89
PDLIM5-218ENST00000513341 TOMM20Q15388 145 aa3.23□□□□□ -1.89
PDLIM5-218ENST00000513341 PGGHGQ32M88 737 aa3.23□□□□□ -1.89
PDLIM5-218ENST00000513341 ACSBG2Q5FVE4 666 aa3.23□□□□□ -1.89
PDLIM5-218ENST00000513341 DCST1Q5T197 706 aa3.23□□□□□ -1.89
PDLIM5-218ENST00000513341 PRAMEF20Q5VT98 475 aa3.23□□□□□ -1.89
PDLIM5-218ENST00000513341 ARMC3Q5W041 872 aa3.23□□□□□ -1.89
PDLIM5-218ENST00000513341 DUPD1Q68J44 220 aa3.23□□□□□ -1.89
PDLIM5-218ENST00000513341 SLC30A6Q6NXT4 461 aa3.23□□□□□ -1.89
PDLIM5-218ENST00000513341 CYHR1Q6ZMK1 362 aa3.23□□□□□ -1.89
PDLIM5-218ENST00000513341 STAC2Q6ZMT1 411 aa3.23□□□□□ -1.89
PDLIM5-218ENST00000513341 NUP54Q7Z3B4 507 aa3.23□□□□□ -1.89
PDLIM5-218ENST00000513341 P4HA3Q7Z4N8 544 aa3.23□□□□□ -1.89
PDLIM5-218ENST00000513341 ANKRD13BQ86YJ7 626 aa3.23□□□□□ -1.89
PDLIM5-218ENST00000513341 GRAMD2AQ8IUY3 354 aa3.23□□□□□ -1.89
PDLIM5-218ENST00000513341 KATNAL2Q8IYT4 538 aa3.23□□□□□ -1.89
PDLIM5-218ENST00000513341 TEX29Q8N6K0 151 aa3.23□□□□□ -1.89
PDLIM5-218ENST00000513341 METTL25Q8N6Q8 603 aa3.23□□□□□ -1.89
PDLIM5-218ENST00000513341 C11orf44Q8N8P7 122 aa3.23□□□□□ -1.89
PDLIM5-218ENST00000513341 CNEP1R1Q8N9A8 125 aa3.23□□□□□ -1.89
PDLIM5-218ENST00000513341 FAM71DQ8N9W8 422 aa3.23□□□□□ -1.89
PDLIM5-218ENST00000513341 FAM83FQ8NEG4 500 aaPredicted RBP3.23□□□□□ -1.89
PDLIM5-218ENST00000513341 STEAP2Q8NFT2 490 aa3.23□□□□□ -1.89
PDLIM5-218ENST00000513341 TTLQ8NG68 377 aa3.23□□□□□ -1.89
PDLIM5-218ENST00000513341 OR10G3Q8NGC4 313 aa3.23□□□□□ -1.89
PDLIM5-218ENST00000513341 OR1J4Q8NGS1 313 aa3.23□□□□□ -1.89
PDLIM5-218ENST00000513341 ACTL9Q8TC94 416 aa3.23□□□□□ -1.89
PDLIM5-218ENST00000513341 SPPL2AQ8TCT8 520 aa3.23□□□□□ -1.89
PDLIM5-218ENST00000513341 ZNF418Q8TF45 676 aaPredicted RBP3.23□□□□□ -1.89
PDLIM5-218ENST00000513341 HSD17B8Q92506 261 aa3.23□□□□□ -1.89
PDLIM5-218ENST00000513341 TRIM63Q969Q1 353 aa3.23□□□□□ -1.89
PDLIM5-218ENST00000513341 MSI2Q96DH6 328 aaKnown RBP3.23□□□□□ -1.89
PDLIM5-218ENST00000513341 SNF8Q96H20 258 aa3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms