RNA–Protein interactions for RNA: ENST00000508216.5

PDLIM5-210, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 1,794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-210ENST00000508216 CBLCQ9ULV8 474 aa10.1□□□□□ -0.79
PDLIM5-210ENST00000508216 FZD10Q9ULW2 581 aa10.1□□□□□ -0.79
PDLIM5-210ENST00000508216 LSM2Q9Y333 95 aaKnown RBP10.1□□□□□ -0.79
PDLIM5-210ENST00000508216 COQ4Q9Y3A0 265 aa10.1□□□□□ -0.79
PDLIM5-210ENST00000508216 A0A096LPK6 155 aa10.09□□□□□ -0.79
PDLIM5-210ENST00000508216 TRBV11-1A0A0K0K1C0 115 aa10.09□□□□□ -0.79
PDLIM5-210ENST00000508216 LOC285095A0A1B0GVY8 99 aa10.09□□□□□ -0.79
PDLIM5-210ENST00000508216 C9orf172C9J069 976 aa10.09□□□□□ -0.79
PDLIM5-210ENST00000508216 C22orf46C9J442 243 aa10.09□□□□□ -0.79
PDLIM5-210ENST00000508216 H0Y8G0 127 aa10.09□□□□□ -0.79
PDLIM5-210ENST00000508216 SSNA1O43805 119 aa10.09□□□□□ -0.79
PDLIM5-210ENST00000508216 KAT7O95251 611 aa10.09□□□□□ -0.79
PDLIM5-210ENST00000508216 MLYCDO95822 493 aa10.09□□□□□ -0.79
PDLIM5-210ENST00000508216 CYC1P08574 325 aa10.09□□□□□ -0.79
PDLIM5-210ENST00000508216 TBC1D3HP0C7X1 549 aa10.09□□□□□ -0.79
PDLIM5-210ENST00000508216 NCK1P16333 377 aa10.09□□□□□ -0.79
PDLIM5-210ENST00000508216 DNAJA1P31689 397 aaKnown RBP10.09□□□□□ -0.79
PDLIM5-210ENST00000508216 STK19P49842 368 aaPredicted RBP10.09□□□□□ -0.79
PDLIM5-210ENST00000508216 MECP2P51608 486 aaKnown RBP10.09□□□□□ -0.79
PDLIM5-210ENST00000508216 PTTG1IPP53801 180 aa10.09□□□□□ -0.79
PDLIM5-210ENST00000508216 PRKAG1P54619 331 aa10.09□□□□□ -0.79
PDLIM5-210ENST00000508216 CLDN8P56748 225 aa10.09□□□□□ -0.79
PDLIM5-210ENST00000508216 RAB8AP61006 207 aa10.09□□□□□ -0.79
PDLIM5-210ENST00000508216 MAXP61244 160 aa10.09□□□□□ -0.79
PDLIM5-210ENST00000508216 RPS26P62854 115 aaKnown RBP10.09□□□□□ -0.79
PDLIM5-210ENST00000508216 TPBGQ13641 420 aa10.09□□□□□ -0.79
PDLIM5-210ENST00000508216 ZNF345Q14585 488 aa10.09□□□□□ -0.79
PDLIM5-210ENST00000508216 RPS6KA2Q15349 733 aa10.09□□□□□ -0.79
PDLIM5-210ENST00000508216 ZNF674Q2M3X9 581 aa10.09□□□□□ -0.79
PDLIM5-210ENST00000508216 EML3Q32P44 896 aa10.09□□□□□ -0.79
PDLIM5-210ENST00000508216 TKFCQ3LXA3 575 aa10.09□□□□□ -0.79
PDLIM5-210ENST00000508216 ZNF620Q6ZNG0 422 aa10.09□□□□□ -0.79
PDLIM5-210ENST00000508216 GRINAQ7Z429 371 aa10.09□□□□□ -0.79
PDLIM5-210ENST00000508216 PDZD3Q86UT5 571 aa10.09□□□□□ -0.79
PDLIM5-210ENST00000508216 WDFY1Q8IWB7 410 aa10.09□□□□□ -0.79
PDLIM5-210ENST00000508216 CPXM2Q8N436 756 aa10.09□□□□□ -0.79
PDLIM5-210ENST00000508216 C12orf76Q8N812 135 aaPredicted RBP10.09□□□□□ -0.79
PDLIM5-210ENST00000508216 SDR9C7Q8NEX9 313 aa10.09□□□□□ -0.79
PDLIM5-210ENST00000508216 OR9Q1Q8NGQ5 310 aa10.09□□□□□ -0.79
PDLIM5-210ENST00000508216 RPLP0P6Q8NHW5 317 aa10.09□□□□□ -0.79
PDLIM5-210ENST00000508216 PCDH19Q8TAB3 1148 aa10.09□□□□□ -0.79
PDLIM5-210ENST00000508216 NPRL2Q8WTW4 380 aa10.09□□□□□ -0.79
PDLIM5-210ENST00000508216 PHYHIPQ92561 330 aa10.09□□□□□ -0.79
PDLIM5-210ENST00000508216 ARL11Q969Q4 196 aa10.09□□□□□ -0.79
PDLIM5-210ENST00000508216 FBXO17Q96EF6 278 aa10.09□□□□□ -0.79
PDLIM5-210ENST00000508216 MVB12AQ96EY5 273 aa10.09□□□□□ -0.79
PDLIM5-210ENST00000508216 NT5C1BQ96P26 610 aa10.09□□□□□ -0.79
PDLIM5-210ENST00000508216 FIZ1Q96SL8 496 aa10.09□□□□□ -0.79
PDLIM5-210ENST00000508216 ABHD16BQ9H3Z7 469 aa10.09□□□□□ -0.79
PDLIM5-210ENST00000508216 C6orf50Q9HD87 102 aa10.09□□□□□ -0.79
PDLIM5-210ENST00000508216 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.09□□□□□ -0.791e-6■■■■■ 27
PDLIM5-210ENST00000508216 UQCC1Q9NVA1 299 aa10.09□□□□□ -0.79
PDLIM5-210ENST00000508216 NAGKQ9UJ70 344 aa10.09□□□□□ -0.79
PDLIM5-210ENST00000508216 TIMM10BQ9Y5J6 103 aa10.09□□□□□ -0.79
PDLIM5-210ENST00000508216 FLVCR1Q9Y5Y0 555 aa10.09□□□□□ -0.79
PDLIM5-210ENST00000508216 ARID2Q68CP9 1835 aa10.09□□□□□ -0.79
PDLIM5-210ENST00000508216 A0A0A6YYC8 382 aaPredicted RBP10.09□□□□□ -0.79
PDLIM5-210ENST00000508216 A0A0D9SG52 128 aa10.09□□□□□ -0.79
PDLIM5-210ENST00000508216 CBY3A6NI87 242 aa10.09□□□□□ -0.79
PDLIM5-210ENST00000508216 SNRPGP15A8MWD9 76 aa10.09□□□□□ -0.79
PDLIM5-210ENST00000508216 I3L1I5 382 aaPredicted RBP10.09□□□□□ -0.79
PDLIM5-210ENST00000508216 NR5A2O00482 541 aa10.09□□□□□ -0.79
PDLIM5-210ENST00000508216 SRPX2O60687 465 aaPredicted RBP10.09□□□□□ -0.79
PDLIM5-210ENST00000508216 TPST2O60704 377 aa10.09□□□□□ -0.79
PDLIM5-210ENST00000508216 CA11O75493 328 aa10.09□□□□□ -0.79
PDLIM5-210ENST00000508216 PMP2P02689 132 aa10.09□□□□□ -0.79
PDLIM5-210ENST00000508216 MT-ND5P03915 603 aa10.09□□□□□ -0.79
PDLIM5-210ENST00000508216 ANXA1P04083 346 aa10.09□□□□□ -0.79
PDLIM5-210ENST00000508216 PSAPP07602 524 aa10.09□□□□□ -0.79
PDLIM5-210ENST00000508216 IL6RP08887 468 aaPredicted RBP10.09□□□□□ -0.79
PDLIM5-210ENST00000508216 FPR1P21462 350 aa10.09□□□□□ -0.79
PDLIM5-210ENST00000508216 HMGB2P26583 209 aaKnown RBP10.09□□□□□ -0.79
PDLIM5-210ENST00000508216 PRDX5P30044 214 aa10.09□□□□□ -0.79
PDLIM5-210ENST00000508216 TAF6P49848 677 aa10.09□□□□□ -0.79
PDLIM5-210ENST00000508216 WNT3P56703 355 aa10.09□□□□□ -0.79
PDLIM5-210ENST00000508216 OR4D2P58180 307 aa10.09□□□□□ -0.79
PDLIM5-210ENST00000508216 ERVFC1-1P60608 527 aa10.09□□□□□ -0.79
PDLIM5-210ENST00000508216 PSG6Q00889 435 aa10.09□□□□□ -0.79
PDLIM5-210ENST00000508216 TMEM115Q12893 351 aaPredicted RBP10.09□□□□□ -0.79
PDLIM5-210ENST00000508216 MLLT11Q13015 90 aaPredicted RBP10.09□□□□□ -0.79
PDLIM5-210ENST00000508216 HNRNPA0Q13151 305 aaKnown RBP10.09□□□□□ -0.79
PDLIM5-210ENST00000508216 MADCAM1Q13477 382 aa10.09□□□□□ -0.79
PDLIM5-210ENST00000508216 HTR4Q13639 388 aa10.09□□□□□ -0.79
PDLIM5-210ENST00000508216 PSG3Q16557 428 aa10.09□□□□□ -0.79
PDLIM5-210ENST00000508216 GFOD2Q3B7J2 385 aa10.09□□□□□ -0.79
PDLIM5-210ENST00000508216 RAB6CQ53S08 254 aa10.09□□□□□ -0.79
PDLIM5-210ENST00000508216 PPM1JQ5JR12 505 aa10.09□□□□□ -0.79
PDLIM5-210ENST00000508216 OTUD1Q5VV17 481 aaPredicted RBP10.09□□□□□ -0.79
PDLIM5-210ENST00000508216 SLC22A10Q63ZE4 541 aa10.09□□□□□ -0.79
PDLIM5-210ENST00000508216 ZNF774Q6NX45 483 aa10.09□□□□□ -0.79
PDLIM5-210ENST00000508216 VHLLQ6RSH7 139 aa10.09□□□□□ -0.79
PDLIM5-210ENST00000508216 SSX7Q7RTT5 188 aa10.09□□□□□ -0.79
PDLIM5-210ENST00000508216 TMEM179BQ7Z7N9 219 aa10.09□□□□□ -0.79
PDLIM5-210ENST00000508216 CD163Q86VB7 1156 aa10.09□□□□□ -0.79
PDLIM5-210ENST00000508216 CACUL1Q86Y37 369 aa10.09□□□□□ -0.79
PDLIM5-210ENST00000508216 HIST3H2BBQ8N257 126 aa10.09□□□□□ -0.79
PDLIM5-210ENST00000508216 ZNF664Q8N3J9 261 aa10.09□□□□□ -0.79
PDLIM5-210ENST00000508216 OR9I1Q8NGQ6 314 aa10.09□□□□□ -0.79
PDLIM5-210ENST00000508216 OR51A7Q8NH64 312 aa10.09□□□□□ -0.79
PDLIM5-210ENST00000508216 CLEC4DQ8WXI8 215 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms