RNA–Protein interactions for RNA: ENST00000507944.5

CLDND1-216, Transcript of claudin domain containing 1, humanhuman

TSL 4

Gene CLDND1, Length 903 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-216ENST00000507944 UBTD1Q9HAC8 227 aa18.61■□□□□ 0.57
CLDND1-216ENST00000507944 FANCFQ9NPI8 374 aa18.61■□□□□ 0.57
CLDND1-216ENST00000507944 TIGARQ9NQ88 270 aa18.61■□□□□ 0.57
CLDND1-216ENST00000507944 NOP53Q9NZM5 478 aaKnown RBP18.61■□□□□ 0.57
CLDND1-216ENST00000507944 DTNAQ9Y4J8 743 aa18.61■□□□□ 0.57
CLDND1-216ENST00000507944 ACTL7BQ9Y614 415 aa18.61■□□□□ 0.57
CLDND1-216ENST00000507944 GPC6Q9Y625 555 aaPredicted RBP18.61■□□□□ 0.57
CLDND1-216ENST00000507944 NIPBLQ6KC79 2804 aaeCLIP18.6■□□□□ 0.57
CLDND1-216ENST00000507944 USF3Q68DE3 2245 aa18.6■□□□□ 0.57
CLDND1-216ENST00000507944 NPIPB9F8W1W9 429 aa18.6■□□□□ 0.57
CLDND1-216ENST00000507944 ARHGEF9O43307 516 aa18.6■□□□□ 0.57
CLDND1-216ENST00000507944 THBDP07204 575 aa18.6■□□□□ 0.57
CLDND1-216ENST00000507944 TUBBP07437 444 aa18.6■□□□□ 0.57
CLDND1-216ENST00000507944 PABPC4LP0CB38 370 aaKnown RBP18.6■□□□□ 0.57
CLDND1-216ENST00000507944 PPP3CBP16298 524 aa18.6■□□□□ 0.57
CLDND1-216ENST00000507944 FPR1P21462 350 aa18.6■□□□□ 0.57
CLDND1-216ENST00000507944 LOXP28300 417 aaPredicted RBP18.6■□□□□ 0.57
CLDND1-216ENST00000507944 SOAT1P35610 550 aa18.6■□□□□ 0.57
CLDND1-216ENST00000507944 TOMM34Q15785 309 aaPredicted RBP18.6■□□□□ 0.57
CLDND1-216ENST00000507944 SMU1Q2TAY7 513 aa18.6■□□□□ 0.57
CLDND1-216ENST00000507944 KRTAP21-3Q3LHN1 58 aa18.6■□□□□ 0.57
CLDND1-216ENST00000507944 KRT71Q3SY84 523 aa18.6■□□□□ 0.57
CLDND1-216ENST00000507944 STK32CQ86UX6 486 aa18.6■□□□□ 0.57
CLDND1-216ENST00000507944 ZNF614Q8N883 585 aa18.6■□□□□ 0.57
CLDND1-216ENST00000507944 OR5D16Q8NGK9 328 aa18.6■□□□□ 0.57
CLDND1-216ENST00000507944 GPR119Q8TDV5 335 aa18.6■□□□□ 0.57
CLDND1-216ENST00000507944 REXO5Q96IC2 774 aaKnown RBP18.6■□□□□ 0.57
CLDND1-216ENST00000507944 PPP1R36Q96LQ0 422 aa18.6■□□□□ 0.57
CLDND1-216ENST00000507944 ZIM3Q96PE6 472 aa18.6■□□□□ 0.57
CLDND1-216ENST00000507944 SDF2Q99470 211 aa18.6■□□□□ 0.57
CLDND1-216ENST00000507944 ZNF395Q9H8N7 513 aaPredicted RBP18.6■□□□□ 0.57
CLDND1-216ENST00000507944 ASIC5Q9NY37 505 aa18.6■□□□□ 0.57
CLDND1-216ENST00000507944 GJE1A6NN92 205 aa18.59■□□□□ 0.57
CLDND1-216ENST00000507944 SMPD2O60906 423 aa18.59■□□□□ 0.57
CLDND1-216ENST00000507944 SERPINE1P05121 402 aa18.59■□□□□ 0.57
CLDND1-216ENST00000507944 MATN1P21941 496 aa18.59■□□□□ 0.57
CLDND1-216ENST00000507944 CHI3L2Q15782 390 aa18.59■□□□□ 0.57
CLDND1-216ENST00000507944 PDCD2Q16342 344 aaPredicted RBP18.59■□□□□ 0.57
CLDND1-216ENST00000507944 ZNF239Q16600 458 aaKnown RBP18.59■□□□□ 0.57
CLDND1-216ENST00000507944 NDUFAF6Q330K2 333 aa18.59■□□□□ 0.57
CLDND1-216ENST00000507944 TMEM176BQ3YBM2 270 aaPredicted RBP18.59■□□□□ 0.57
CLDND1-216ENST00000507944 OR4F3Q6IEY1 312 aa18.59■□□□□ 0.57
CLDND1-216ENST00000507944 C6orf120Q7Z4R8 191 aa18.59■□□□□ 0.57
CLDND1-216ENST00000507944 P3H2Q8IVL5 708 aa18.59■□□□□ 0.57
CLDND1-216ENST00000507944 CLECL1Q8IZS7 167 aa18.59■□□□□ 0.57
CLDND1-216ENST00000507944 MREGQ8N565 214 aa18.59■□□□□ 0.57
CLDND1-216ENST00000507944 ZNF781Q8N8C0 355 aa18.59■□□□□ 0.57
CLDND1-216ENST00000507944 CPNE4Q96A23 557 aaPredicted RBP18.59■□□□□ 0.57
CLDND1-216ENST00000507944 C12orf49Q9H741 205 aa18.59■□□□□ 0.57
CLDND1-216ENST00000507944 AKTIPQ9H8T0 292 aa18.59■□□□□ 0.57
CLDND1-216ENST00000507944 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.59■□□□□ 0.57
CLDND1-216ENST00000507944 V9GYY5 206 aaPredicted RBP18.59■□□□□ 0.57
CLDND1-216ENST00000507944 DUXAA6NLW8 204 aa18.58■□□□□ 0.56
CLDND1-216ENST00000507944 BIRC5O15392 142 aa18.58■□□□□ 0.56
CLDND1-216ENST00000507944 RGS16O15492 202 aaPredicted RBP18.58■□□□□ 0.56
CLDND1-216ENST00000507944 KLF4O43474 513 aa18.58■□□□□ 0.56
CLDND1-216ENST00000507944 EIF4E2O60573 245 aaKnown RBP18.58■□□□□ 0.56
CLDND1-216ENST00000507944 MYZAPP0CAP1 466 aa18.58■□□□□ 0.56
CLDND1-216ENST00000507944 NID1P14543 1247 aa18.58■□□□□ 0.56
CLDND1-216ENST00000507944 PRKCAP17252 672 aa18.58■□□□□ 0.56
CLDND1-216ENST00000507944 AGTR1P30556 359 aa18.58■□□□□ 0.56
CLDND1-216ENST00000507944 ABCE1P61221 599 aaKnown RBP18.58■□□□□ 0.56
CLDND1-216ENST00000507944 RPS26P62854 115 aaKnown RBP18.58■□□□□ 0.56
CLDND1-216ENST00000507944 ZNF844Q08AG5 666 aa18.58■□□□□ 0.56
CLDND1-216ENST00000507944 BEX5Q5H9J7 111 aa18.58■□□□□ 0.56
CLDND1-216ENST00000507944 BIVMQ86UB2 503 aa18.58■□□□□ 0.56
CLDND1-216ENST00000507944 LRRC75A-AS1Q8N1F1 130 aa18.58■□□□□ 0.56
CLDND1-216ENST00000507944 CLEC4FQ8N1N0 589 aa18.58■□□□□ 0.56
CLDND1-216ENST00000507944 ATP6V1C2Q8NEY4 427 aa18.58■□□□□ 0.56
CLDND1-216ENST00000507944 OR5W2Q8NH69 310 aa18.58■□□□□ 0.56
CLDND1-216ENST00000507944 RFWD2Q8NHY2 731 aa18.58■□□□□ 0.56
CLDND1-216ENST00000507944 RNF128Q8TEB7 428 aa18.58■□□□□ 0.56
CLDND1-216ENST00000507944 ABHD3Q8WU67 409 aa18.58■□□□□ 0.56
CLDND1-216ENST00000507944 C18orf12Q96KH6 178 aa18.58■□□□□ 0.56
CLDND1-216ENST00000507944 MRGPRX4Q96LA9 322 aa18.58■□□□□ 0.56
CLDND1-216ENST00000507944 CCL19Q99731 98 aa18.58■□□□□ 0.56
CLDND1-216ENST00000507944 SRXN1Q9BYN0 137 aa18.58■□□□□ 0.56
CLDND1-216ENST00000507944 SERHL2Q9H4I8 314 aa18.58■□□□□ 0.56
CLDND1-216ENST00000507944 GPR52Q9Y2T5 361 aa18.58■□□□□ 0.56
CLDND1-216ENST00000507944 RAP2CQ9Y3L5 183 aa18.58■□□□□ 0.56
CLDND1-216ENST00000507944 RAI1Q7Z5J4 1906 aaPredicted RBP18.57■□□□□ 0.56
CLDND1-216ENST00000507944 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP18.57■□□□□ 0.56
CLDND1-216ENST00000507944 RNASET2O00584 256 aaKnown RBP18.57■□□□□ 0.56
CLDND1-216ENST00000507944 ZNF264O43296 627 aa18.57■□□□□ 0.56
CLDND1-216ENST00000507944 HOXB4P17483 251 aaPredicted RBP18.57■□□□□ 0.56
CLDND1-216ENST00000507944 RNPS1Q15287 305 aaKnown RBP18.57■□□□□ 0.56
CLDND1-216ENST00000507944 GPR68Q15743 365 aa18.57■□□□□ 0.56
CLDND1-216ENST00000507944 TMEM201Q5SNT2 666 aa18.57■□□□□ 0.56
CLDND1-216ENST00000507944 PDZK1Q5T2W1 519 aa18.57■□□□□ 0.56
CLDND1-216ENST00000507944 C20orf204Q6ZNR8 217 aa18.57■□□□□ 0.56
CLDND1-216ENST00000507944 TOR1AIP2Q8NFQ8 470 aa18.57■□□□□ 0.56
CLDND1-216ENST00000507944 ZNF524Q96C55 264 aa18.57■□□□□ 0.56
CLDND1-216ENST00000507944 ARSGQ96EG1 525 aa18.57■□□□□ 0.56
CLDND1-216ENST00000507944 ACTR6Q9GZN1 396 aa18.57■□□□□ 0.56
CLDND1-216ENST00000507944 NMUR2Q9GZQ4 415 aa18.57■□□□□ 0.56
CLDND1-216ENST00000507944 SSU72Q9NP77 194 aaKnown RBP18.57■□□□□ 0.56
CLDND1-216ENST00000507944 PCDHGB4Q9UN71 923 aa18.57■□□□□ 0.56
CLDND1-216ENST00000507944 EPB41L3Q9Y2J2 1087 aaPredicted RBP18.57■□□□□ 0.56
CLDND1-216ENST00000507944 CADP27708 2225 aa18.56■□□□□ 0.56
CLDND1-216ENST00000507944 RNF103-CHMP3A0A140T963 221 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms