RNA–Protein interactions for RNA: ENST00000506233.5

SCLT1-207, Transcript of sodium channel and clathrin linker 1, humanhuman

TSL 2

Gene SCLT1, Length 3,673 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-207ENST00000506233 RDH12Q96NR8 316 aa5.42□□□□□ -1.54
SCLT1-207ENST00000506233 FEVQ99581 238 aa5.42□□□□□ -1.54
SCLT1-207ENST00000506233 C17orf62Q9BQA9 187 aa5.42□□□□□ -1.54
SCLT1-207ENST00000506233 NDC1Q9BTX1 674 aa5.42□□□□□ -1.54
SCLT1-207ENST00000506233 TEX12Q9BXU0 123 aa5.42□□□□□ -1.54
SCLT1-207ENST00000506233 ACSS1Q9NUB1 689 aaPredicted RBP5.42□□□□□ -1.54
SCLT1-207ENST00000506233 LIN7CQ9NUP9 197 aaKnown RBP5.42□□□□□ -1.54
SCLT1-207ENST00000506233 SLC22A7Q9Y694 548 aa5.42□□□□□ -1.54
SCLT1-207ENST00000506233 ABCA7Q8IZY2 2146 aa5.42□□□□□ -1.54
SCLT1-207ENST00000506233 IGKV3D-11A0A0A0MRZ8 115 aa5.42□□□□□ -1.54
SCLT1-207ENST00000506233 C4orf47A7E2U8 309 aa5.42□□□□□ -1.54
SCLT1-207ENST00000506233 CACNB4O00305 520 aaPredicted RBP5.42□□□□□ -1.54
SCLT1-207ENST00000506233 SLC25A17O43808 307 aa5.42□□□□□ -1.54
SCLT1-207ENST00000506233 FGF17O60258 216 aa5.42□□□□□ -1.54
SCLT1-207ENST00000506233 CNOT3O75175 753 aaKnown RBP5.42□□□□□ -1.54
SCLT1-207ENST00000506233 SLC43A1O75387 559 aa5.42□□□□□ -1.54
SCLT1-207ENST00000506233 TNFAIP8O95379 198 aa5.42□□□□□ -1.54
SCLT1-207ENST00000506233 PRG2P13727 222 aa5.42□□□□□ -1.54
SCLT1-207ENST00000506233 PVRP15151 417 aa5.42□□□□□ -1.54
SCLT1-207ENST00000506233 FUT1P19526 365 aa5.42□□□□□ -1.54
SCLT1-207ENST00000506233 ANOS1P23352 680 aa5.42□□□□□ -1.54
SCLT1-207ENST00000506233 C21orf33P30042 268 aaPredicted RBP5.42□□□□□ -1.54
SCLT1-207ENST00000506233 AHRP35869 848 aa5.42□□□□□ -1.54
SCLT1-207ENST00000506233 SRP54P61011 504 aaKnown RBP5.42□□□□□ -1.54
SCLT1-207ENST00000506233 PSG6Q00889 435 aa5.42□□□□□ -1.54
SCLT1-207ENST00000506233 OCA2Q04671 838 aa5.42□□□□□ -1.54
SCLT1-207ENST00000506233 CPTPQ5TA50 214 aa5.42□□□□□ -1.54
SCLT1-207ENST00000506233 TMEM64Q6YI46 380 aa5.42□□□□□ -1.54
SCLT1-207ENST00000506233 KCTD8Q6ZWB6 473 aa5.42□□□□□ -1.54
SCLT1-207ENST00000506233 CA13Q8N1Q1 262 aa5.42□□□□□ -1.54
SCLT1-207ENST00000506233 ZNF615Q8N8J6 731 aa5.42□□□□□ -1.54
SCLT1-207ENST00000506233 OR4A15Q8NGL6 344 aa5.42□□□□□ -1.54
SCLT1-207ENST00000506233 DYNC2LI1Q8TCX1 351 aa5.42□□□□□ -1.54
SCLT1-207ENST00000506233 SLC37A2Q8TED4 501 aa5.42□□□□□ -1.54
SCLT1-207ENST00000506233 TMEM171Q8WVE6 324 aa5.42□□□□□ -1.54
SCLT1-207ENST00000506233 GGHQ92820 318 aa5.42□□□□□ -1.54
SCLT1-207ENST00000506233 DGCR14Q96DF8 476 aaKnown RBP5.42□□□□□ -1.54
SCLT1-207ENST00000506233 TMEM19Q96HH6 336 aa5.42□□□□□ -1.54
SCLT1-207ENST00000506233 C12orf66Q96MD2 445 aa5.42□□□□□ -1.54
SCLT1-207ENST00000506233 WDR92Q96MX6 357 aa5.42□□□□□ -1.54
SCLT1-207ENST00000506233 LMF1Q96S06 567 aa5.42□□□□□ -1.54
SCLT1-207ENST00000506233 NPAS1Q99742 590 aa5.42□□□□□ -1.54
SCLT1-207ENST00000506233 SCNM1Q9BWG6 230 aa5.42□□□□□ -1.54
SCLT1-207ENST00000506233 CLK4Q9HAZ1 481 aaKnown RBP5.42□□□□□ -1.54
SCLT1-207ENST00000506233 AKIP1Q9NQ31 210 aa5.42□□□□□ -1.54
SCLT1-207ENST00000506233 THUMPD1Q9NXG2 353 aaKnown RBP5.42□□□□□ -1.54
SCLT1-207ENST00000506233 RHCGQ9UBD6 479 aa5.42□□□□□ -1.54
SCLT1-207ENST00000506233 FBXL17Q9UF56 701 aa5.42□□□□□ -1.54
SCLT1-207ENST00000506233 PSORS1C1Q9UIG5 152 aa5.42□□□□□ -1.54
SCLT1-207ENST00000506233 OSGIN1Q9UJX0 560 aa5.42□□□□□ -1.54
SCLT1-207ENST00000506233 ASF1AQ9Y294 204 aa5.42□□□□□ -1.54
SCLT1-207ENST00000506233 ITPR1Q14643 2758 aa5.42□□□□□ -1.54
SCLT1-207ENST00000506233 A8MZ25 164 aa5.42□□□□□ -1.54
SCLT1-207ENST00000506233 PRR32B1ATL7 298 aa5.42□□□□□ -1.54
SCLT1-207ENST00000506233 LALBAP00709 142 aa5.42□□□□□ -1.54
SCLT1-207ENST00000506233 CATP04040 527 aaKnown RBP5.42□□□□□ -1.54
SCLT1-207ENST00000506233 ATP1B1P05026 303 aa5.42□□□□□ -1.54
SCLT1-207ENST00000506233 APODP05090 189 aa5.42□□□□□ -1.54
SCLT1-207ENST00000506233 HBQ1P09105 142 aa5.42□□□□□ -1.54
SCLT1-207ENST00000506233 ZNF888P0CJ79 500 aaPredicted RBP5.42□□□□□ -1.54
SCLT1-207ENST00000506233 ALPPL2P10696 532 aa5.42□□□□□ -1.54
SCLT1-207ENST00000506233 COX7A2P14406 83 aa5.42□□□□□ -1.54
SCLT1-207ENST00000506233 HOXB2P14652 356 aa5.42□□□□□ -1.54
SCLT1-207ENST00000506233 UQCRC2P22695 453 aa5.42□□□□□ -1.54
SCLT1-207ENST00000506233 SLC2A5P22732 501 aa5.42□□□□□ -1.54
SCLT1-207ENST00000506233 AQP1P29972 269 aa5.42□□□□□ -1.54
SCLT1-207ENST00000506233 RRM2P31350 389 aa5.42□□□□□ -1.54
SCLT1-207ENST00000506233 IDUAP35475 653 aa5.42□□□□□ -1.54
SCLT1-207ENST00000506233 ACAA2P42765 397 aaKnown RBP5.42□□□□□ -1.54
SCLT1-207ENST00000506233 EMDP50402 254 aa5.42□□□□□ -1.54
SCLT1-207ENST00000506233 MFAP4P55083 255 aa5.42□□□□□ -1.54
SCLT1-207ENST00000506233 Q6ZSR6 202 aa5.42□□□□□ -1.54
SCLT1-207ENST00000506233 COX15Q7KZN9 410 aa5.42□□□□□ -1.54
SCLT1-207ENST00000506233 C6orf120Q7Z4R8 191 aa5.42□□□□□ -1.54
SCLT1-207ENST00000506233 MEX3DQ86XN8 651 aaKnown RBP5.42□□□□□ -1.54
SCLT1-207ENST00000506233 EID3Q8N140 333 aa5.42□□□□□ -1.54
SCLT1-207ENST00000506233 PARP8Q8N3A8 854 aa5.42□□□□□ -1.54
SCLT1-207ENST00000506233 POMGNT2Q8NAT1 580 aa5.42□□□□□ -1.54
SCLT1-207ENST00000506233 NUP43Q8NFH3 380 aa5.42□□□□□ -1.54
SCLT1-207ENST00000506233 RPL3LQ92901 407 aaKnown RBP5.42□□□□□ -1.54
SCLT1-207ENST00000506233 TMCO6Q96DC7 493 aa5.42□□□□□ -1.54
SCLT1-207ENST00000506233 ELMOD3Q96FG2 381 aa5.42□□□□□ -1.54
SCLT1-207ENST00000506233 PPP1R16AQ96I34 528 aa5.42□□□□□ -1.54
SCLT1-207ENST00000506233 VPS50Q96JG6 964 aa5.42□□□□□ -1.54
SCLT1-207ENST00000506233 NSMCE2Q96MF7 247 aa5.42□□□□□ -1.54
SCLT1-207ENST00000506233 GPN2Q9H9Y4 310 aaPredicted RBP5.42□□□□□ -1.54
SCLT1-207ENST00000506233 ACOT13Q9NPJ3 140 aa5.42□□□□□ -1.54
SCLT1-207ENST00000506233 SEMA4GQ9NTN9 838 aa5.42□□□□□ -1.54
SCLT1-207ENST00000506233 EHD3Q9NZN3 535 aa5.42□□□□□ -1.54
SCLT1-207ENST00000506233 HS3ST3A1Q9Y663 406 aa5.42□□□□□ -1.54
SCLT1-207ENST00000506233 TCRBV21S2A2A0A5A6 115 aa5.41□□□□□ -1.54
SCLT1-207ENST00000506233 ZC3H12DA2A288 527 aaKnown RBP5.41□□□□□ -1.54
SCLT1-207ENST00000506233 CDHR4A6H8M9 788 aa5.41□□□□□ -1.54
SCLT1-207ENST00000506233 IMPA2O14732 288 aa5.41□□□□□ -1.54
SCLT1-207ENST00000506233 LDB3O75112 727 aa5.41□□□□□ -1.54
SCLT1-207ENST00000506233 GABARAPO95166 117 aa5.41□□□□□ -1.54
SCLT1-207ENST00000506233 ST6GAL1P15907 406 aa5.41□□□□□ -1.54
SCLT1-207ENST00000506233 ITIH1P19827 911 aa5.41□□□□□ -1.54
SCLT1-207ENST00000506233 CAMLGP49069 296 aa5.41□□□□□ -1.54
SCLT1-207ENST00000506233 GABARAPL2P60520 117 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms