RNA–Protein interactions for RNA: ENST00000495172.1

GARNL3-219, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-219ENST00000495172 IL22Q9GZX6 179 aa7.57□□□□□ -1.2
GARNL3-219ENST00000495172 BCO1Q9HAY6 547 aa7.57□□□□□ -1.2
GARNL3-219ENST00000495172 MS4A12Q9NXJ0 267 aa7.57□□□□□ -1.2
GARNL3-219ENST00000495172 TAS2R16Q9NYV7 291 aa7.57□□□□□ -1.2
GARNL3-219ENST00000495172 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP7.57□□□□□ -1.2
GARNL3-219ENST00000495172 COMMD10Q9Y6G5 202 aa7.57□□□□□ -1.2
GARNL3-219ENST00000495172 A0A1W2PRB8 838 aa7.56□□□□□ -1.2
GARNL3-219ENST00000495172 PABPC4LP0CB38 370 aaKnown RBP7.56□□□□□ -1.2
GARNL3-219ENST00000495172 ANPEPP15144 967 aa7.56□□□□□ -1.2
GARNL3-219ENST00000495172 PORP16435 677 aaPredicted RBP7.56□□□□□ -1.2
GARNL3-219ENST00000495172 NPR2P20594 1047 aa7.56□□□□□ -1.2
GARNL3-219ENST00000495172 ACHEP22303 614 aa7.56□□□□□ -1.2
GARNL3-219ENST00000495172 BSGP35613 385 aa7.56□□□□□ -1.2
GARNL3-219ENST00000495172 KRT20P35900 424 aa7.56□□□□□ -1.2
GARNL3-219ENST00000495172 FDFT1P37268 417 aa7.56□□□□□ -1.2
GARNL3-219ENST00000495172 PNLIPRP2P54317 469 aa7.56□□□□□ -1.2
GARNL3-219ENST00000495172 GPX6P59796 221 aa7.56□□□□□ -1.2
GARNL3-219ENST00000495172 THOC5Q13769 683 aaKnown RBP7.56□□□□□ -1.2
GARNL3-219ENST00000495172 PLPPR5Q32ZL2 321 aa7.56□□□□□ -1.2
GARNL3-219ENST00000495172 ALKBH6Q3KRA9 238 aa7.56□□□□□ -1.2
GARNL3-219ENST00000495172 TMEM176BQ3YBM2 270 aaPredicted RBP7.56□□□□□ -1.2
GARNL3-219ENST00000495172 CYP27C1Q4G0S4 372 aa7.56□□□□□ -1.2
GARNL3-219ENST00000495172 TMEM35AQ53FP2 167 aa7.56□□□□□ -1.2
GARNL3-219ENST00000495172 OR52E8Q6IFG1 317 aa7.56□□□□□ -1.2
GARNL3-219ENST00000495172 GALNT18Q6P9A2 607 aa7.56□□□□□ -1.2
GARNL3-219ENST00000495172 BRD3OSQ6XYD6 125 aa7.56□□□□□ -1.2
GARNL3-219ENST00000495172 GPATCH11Q8N954 259 aa7.56□□□□□ -1.2
GARNL3-219ENST00000495172 SRFBP1Q8NEF9 429 aaKnown RBP7.56□□□□□ -1.2
GARNL3-219ENST00000495172 OR4K14Q8NGD5 310 aa7.56□□□□□ -1.2
GARNL3-219ENST00000495172 RDH5Q92781 318 aa7.56□□□□□ -1.2
GARNL3-219ENST00000495172 CPNE4Q96A23 557 aaPredicted RBP7.56□□□□□ -1.2
GARNL3-219ENST00000495172 RGMAQ96B86 450 aa7.56□□□□□ -1.2
GARNL3-219ENST00000495172 ZNF524Q96C55 264 aa7.56□□□□□ -1.2
GARNL3-219ENST00000495172 ZNF837Q96EG3 531 aaPredicted RBP7.56□□□□□ -1.2
GARNL3-219ENST00000495172 SH3YL1Q96HL8 342 aaPredicted RBP7.56□□□□□ -1.2
GARNL3-219ENST00000495172 MTERF1Q99551 399 aaKnown RBP7.56□□□□□ -1.2
GARNL3-219ENST00000495172 SYT3Q9BQG1 590 aa7.56□□□□□ -1.2
GARNL3-219ENST00000495172 NUP62CLQ9H1M0 184 aa7.56□□□□□ -1.2
GARNL3-219ENST00000495172 MED17Q9NVC6 651 aa7.56□□□□□ -1.2
GARNL3-219ENST00000495172 BFARQ9NZS9 450 aa7.56□□□□□ -1.2
GARNL3-219ENST00000495172 MYEF2Q9P2K5 600 aaKnown RBP7.56□□□□□ -1.2
GARNL3-219ENST00000495172 FBXO5Q9UKT4 447 aa7.56□□□□□ -1.2
GARNL3-219ENST00000495172 CACNG2Q9Y698 323 aa7.56□□□□□ -1.2
GARNL3-219ENST00000495172 HERC1Q15751 4861 aa7.56□□□□□ -1.2
GARNL3-219ENST00000495172 ALMS1Q8TCU4 4167 aa7.55□□□□□ -1.2
GARNL3-219ENST00000495172 TRAPPC2LH3BP13 241 aa7.55□□□□□ -1.2
GARNL3-219ENST00000495172 SKAP2O75563 359 aaPredicted RBP7.55□□□□□ -1.2
GARNL3-219ENST00000495172 ANGPTL1O95841 491 aa7.55□□□□□ -1.2
GARNL3-219ENST00000495172 FAM157BP0CG42 384 aa7.55□□□□□ -1.2
GARNL3-219ENST00000495172 IGLL1P15814 213 aa7.55□□□□□ -1.2
GARNL3-219ENST00000495172 GSTM2P28161 218 aa7.55□□□□□ -1.2
GARNL3-219ENST00000495172 HPDP32754 393 aaPredicted RBP7.55□□□□□ -1.2
GARNL3-219ENST00000495172 CASP2P42575 452 aa7.55□□□□□ -1.2
GARNL3-219ENST00000495172 HSPA7P48741 367 aa7.55□□□□□ -1.2
GARNL3-219ENST00000495172 NPY2RP49146 381 aa7.55□□□□□ -1.2
GARNL3-219ENST00000495172 NAP1L1P55209 391 aaKnown RBP7.55□□□□□ -1.2
GARNL3-219ENST00000495172 IL2P60568 153 aa7.55□□□□□ -1.2
GARNL3-219ENST00000495172 SARNPP82979 210 aaKnown RBP7.55□□□□□ -1.2
GARNL3-219ENST00000495172 ZBED6P86452 979 aa7.55□□□□□ -1.2
GARNL3-219ENST00000495172 NAAAQ02083 359 aa7.55□□□□□ -1.2
GARNL3-219ENST00000495172 FOXF1Q12946 379 aa7.55□□□□□ -1.2
GARNL3-219ENST00000495172 CHIT1Q13231 466 aa7.55□□□□□ -1.2
GARNL3-219ENST00000495172 DHX34Q14147 1143 aaKnown RBP7.55□□□□□ -1.2
GARNL3-219ENST00000495172 ZNF460Q14592 562 aa7.55□□□□□ -1.2
GARNL3-219ENST00000495172 CPTPQ5TA50 214 aa7.55□□□□□ -1.2
GARNL3-219ENST00000495172 LRRC8EQ6NSJ5 796 aa7.55□□□□□ -1.2
GARNL3-219ENST00000495172 CYP20A1Q6UW02 462 aa7.55□□□□□ -1.2
GARNL3-219ENST00000495172 LRP11Q86VZ4 500 aa7.55□□□□□ -1.2
GARNL3-219ENST00000495172 ZCCHC7Q8N3Z6 543 aaKnown RBP7.55□□□□□ -1.2
GARNL3-219ENST00000495172 RNF10Q8N5U6 811 aaKnown RBP7.55□□□□□ -1.2
GARNL3-219ENST00000495172 ZNF527Q8NB42 609 aa7.55□□□□□ -1.2
GARNL3-219ENST00000495172 GLB1L3Q8NCI6 653 aaPredicted RBP7.55□□□□□ -1.2
GARNL3-219ENST00000495172 C7orf57Q8NEG2 295 aa7.55□□□□□ -1.2
GARNL3-219ENST00000495172 RAB8BQ92930 207 aa7.55□□□□□ -1.2
GARNL3-219ENST00000495172 POP5Q969H6 163 aaKnown RBP7.55□□□□□ -1.2
GARNL3-219ENST00000495172 VSTM2LQ96N03 204 aa7.55□□□□□ -1.2
GARNL3-219ENST00000495172 SLC38A2Q96QD8 506 aa7.55□□□□□ -1.2
GARNL3-219ENST00000495172 CHP1Q99653 195 aa7.55□□□□□ -1.2
GARNL3-219ENST00000495172 ASB6Q9NWX5 421 aa7.55□□□□□ -1.2
GARNL3-219ENST00000495172 SEC14L4Q9UDX3 406 aa7.55□□□□□ -1.2
GARNL3-219ENST00000495172 LEF1Q9UJU2 399 aaPredicted RBP7.55□□□□□ -1.2
GARNL3-219ENST00000495172 FZR1Q9UM11 496 aa7.55□□□□□ -1.2
GARNL3-219ENST00000495172 AUP1Q9Y679 476 aa7.55□□□□□ -1.2
GARNL3-219ENST00000495172 A0A1B0GTH6 734 aa7.54□□□□□ -1.2
GARNL3-219ENST00000495172 ZCWPW2A0A1B0GU75 182 aa7.54□□□□□ -1.2
GARNL3-219ENST00000495172 SRRM5B3KS81 715 aa7.54□□□□□ -1.2
GARNL3-219ENST00000495172 NR5A2O00482 541 aa7.54□□□□□ -1.2
GARNL3-219ENST00000495172 RGS14O43566 566 aa7.54□□□□□ -1.2
GARNL3-219ENST00000495172 ULK1O75385 1050 aa7.54□□□□□ -1.2
GARNL3-219ENST00000495172 GYPCP04921 128 aa7.54□□□□□ -1.2
GARNL3-219ENST00000495172 CECR9P0C854 216 aa7.54□□□□□ -1.2
GARNL3-219ENST00000495172 NAT2P11245 290 aa7.54□□□□□ -1.2
GARNL3-219ENST00000495172 ME2P23368 584 aa7.54□□□□□ -1.2
GARNL3-219ENST00000495172 CTNNA1P35221 906 aaKnown RBP7.54□□□□□ -1.2
GARNL3-219ENST00000495172 PTPN7P35236 360 aa7.54□□□□□ -1.2
GARNL3-219ENST00000495172 MSX2P35548 267 aaPredicted RBP7.54□□□□□ -1.2
GARNL3-219ENST00000495172 MAGEB1P43366 347 aa7.54□□□□□ -1.2
GARNL3-219ENST00000495172 ATP4BP51164 291 aa7.54□□□□□ -1.2
GARNL3-219ENST00000495172 UBE2HP62256 183 aa7.54□□□□□ -1.2
GARNL3-219ENST00000495172 EGR3Q06889 387 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms