RNA–Protein interactions for RNA: ENST00000494612.1

SMC4-224, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 622 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-224ENST00000494612 FCN1O00602 326 aa3.32□□□□□ -1.88
SMC4-224ENST00000494612 TM9SF1O15321 606 aa3.32□□□□□ -1.88
SMC4-224ENST00000494612 DUX1O43812 170 aa3.32□□□□□ -1.88
SMC4-224ENST00000494612 JAK2O60674 1132 aa3.32□□□□□ -1.88
SMC4-224ENST00000494612 SRSF10O75494 262 aaKnown RBP3.32□□□□□ -1.88
SMC4-224ENST00000494612 STX11O75558 287 aa3.32□□□□□ -1.88
SMC4-224ENST00000494612 DUSP14O95147 198 aaKnown RBP3.32□□□□□ -1.88
SMC4-224ENST00000494612 GUCA1CO95843 209 aa3.32□□□□□ -1.88
SMC4-224ENST00000494612 CT45A10P0DMU9 189 aa3.32□□□□□ -1.88
SMC4-224ENST00000494612 KRT13P13646 458 aa3.32□□□□□ -1.88
SMC4-224ENST00000494612 DESP17661 470 aa3.32□□□□□ -1.88
SMC4-224ENST00000494612 GNPDA1P46926 289 aa3.32□□□□□ -1.88
SMC4-224ENST00000494612 LIM2P55344 173 aa3.32□□□□□ -1.88
SMC4-224ENST00000494612 RGS1Q08116 209 aa3.32□□□□□ -1.88
SMC4-224ENST00000494612 KLHL30Q0D2K2 578 aa3.32□□□□□ -1.88
SMC4-224ENST00000494612 CYP51A1Q16850 503 aa3.32□□□□□ -1.88
SMC4-224ENST00000494612 QRICH1Q2TAL8 776 aa3.32□□□□□ -1.88
SMC4-224ENST00000494612 CYBRD1Q53TN4 286 aa3.32□□□□□ -1.88
SMC4-224ENST00000494612 PAN3Q58A45 887 aaKnown RBP3.32□□□□□ -1.88
SMC4-224ENST00000494612 ZNF311Q5JNZ3 666 aa3.32□□□□□ -1.88
SMC4-224ENST00000494612 NIPAL3Q6P499 406 aa3.32□□□□□ -1.88
SMC4-224ENST00000494612 CENPUQ71F23 418 aa3.32□□□□□ -1.88
SMC4-224ENST00000494612 HSD11B1LQ7Z5J1 315 aa3.32□□□□□ -1.88
SMC4-224ENST00000494612 ZNF573Q86YE8 665 aa3.32□□□□□ -1.88
SMC4-224ENST00000494612 GRAMD2AQ8IUY3 354 aa3.32□□□□□ -1.88
SMC4-224ENST00000494612 GPD1LQ8N335 351 aa3.32□□□□□ -1.88
SMC4-224ENST00000494612 CSNK1A1LQ8N752 337 aa3.32□□□□□ -1.88
SMC4-224ENST00000494612 TRUB1Q8WWH5 349 aaKnown RBP3.32□□□□□ -1.88
SMC4-224ENST00000494612 EXOSC3Q9NQT5 275 aaKnown RBP3.32□□□□□ -1.88
SMC4-224ENST00000494612 CHRNA9Q9UGM1 479 aa3.32□□□□□ -1.88
SMC4-224ENST00000494612 XPO7Q9UIA9 1087 aaKnown RBP3.32□□□□□ -1.88
SMC4-224ENST00000494612 ROCK1Q13464 1354 aa3.32□□□□□ -1.88
SMC4-224ENST00000494612 PLEKHH1Q9ULM0 1364 aa3.32□□□□□ -1.88
SMC4-224ENST00000494612 NRXN1Q9ULB1 1477 aa3.32□□□□□ -1.88
SMC4-224ENST00000494612 CASZ1Q86V15 1759 aa3.31□□□□□ -1.88
SMC4-224ENST00000494612 TRPM3Q9HCF6 1732 aaPredicted RBP3.31□□□□□ -1.88
SMC4-224ENST00000494612 DLC1Q96QB1 1528 aa3.31□□□□□ -1.88
SMC4-224ENST00000494612 TECPR2O15040 1411 aa3.31□□□□□ -1.88
SMC4-224ENST00000494612 E9PLD3 99 aa3.31□□□□□ -1.88
SMC4-224ENST00000494612 SLC17A2O00624 439 aa3.31□□□□□ -1.88
SMC4-224ENST00000494612 STX7O15400 261 aaKnown RBP3.31□□□□□ -1.88
SMC4-224ENST00000494612 EFNA2O43921 213 aa3.31□□□□□ -1.88
SMC4-224ENST00000494612 ANP32DO95626 131 aa3.31□□□□□ -1.88
SMC4-224ENST00000494612 HEXBP07686 556 aa3.31□□□□□ -1.88
SMC4-224ENST00000494612 GIG44P09565 113 aaPredicted RBP3.31□□□□□ -1.88
SMC4-224ENST00000494612 CCDC166P0CW27 439 aa3.31□□□□□ -1.88
SMC4-224ENST00000494612 MDH1P40925 334 aaKnown RBP3.31□□□□□ -1.88
SMC4-224ENST00000494612 BDKRB1P46663 353 aa3.31□□□□□ -1.88
SMC4-224ENST00000494612 EMDP50402 254 aa3.31□□□□□ -1.88
SMC4-224ENST00000494612 CD47Q08722 323 aa3.31□□□□□ -1.88
SMC4-224ENST00000494612 OVGP1Q12889 678 aa3.31□□□□□ -1.88
SMC4-224ENST00000494612 ZNF154Q13106 437 aa3.31□□□□□ -1.88
SMC4-224ENST00000494612 CCDC57Q2TAC2 916 aa3.31□□□□□ -1.88
SMC4-224ENST00000494612 OR8G2PQ6IF36 304 aa3.31□□□□□ -1.88
SMC4-224ENST00000494612 LRRC70Q7Z2Q7 622 aa3.31□□□□□ -1.88
SMC4-224ENST00000494612 CENPLQ8N0S6 344 aaPredicted RBP3.31□□□□□ -1.88
SMC4-224ENST00000494612 GLT8D2Q9H1C3 349 aa3.31□□□□□ -1.88
SMC4-224ENST00000494612 WDR76Q9H967 626 aa3.31□□□□□ -1.88
SMC4-224ENST00000494612 SH3BGRL2Q9UJC5 107 aa3.31□□□□□ -1.88
SMC4-224ENST00000494612 GMPPBQ9Y5P6 360 aa3.31□□□□□ -1.88
SMC4-224ENST00000494612 AP1M2Q9Y6Q5 423 aa3.31□□□□□ -1.88
SMC4-224ENST00000494612 U3KQV3 271 aa3.31□□□□□ -1.88
SMC4-224ENST00000494612 RALGAPA1Q6GYQ0 2036 aa3.31□□□□□ -1.88
SMC4-224ENST00000494612 RGPD3A6NKT7 1758 aaPredicted RBP3.3□□□□□ -1.88
SMC4-224ENST00000494612 RGPD4Q7Z3J3 1758 aa3.3□□□□□ -1.88
SMC4-224ENST00000494612 ALS2Q96Q42 1657 aa3.3□□□□□ -1.88
SMC4-224ENST00000494612 YTHDC2Q9H6S0 1430 aaKnown RBP3.3□□□□□ -1.88
SMC4-224ENST00000494612 KIAA0232Q92628 1395 aa3.3□□□□□ -1.88
SMC4-224ENST00000494612 ABCC11Q96J66 1382 aa3.3□□□□□ -1.88
SMC4-224ENST00000494612 IGHV3-35A0A0C4DH35 117 aa3.3□□□□□ -1.88
SMC4-224ENST00000494612 CLDN3O15551 220 aa3.3□□□□□ -1.88
SMC4-224ENST00000494612 ZNF254O75437 659 aa3.3□□□□□ -1.88
SMC4-224ENST00000494612 CSF2P04141 144 aa3.3□□□□□ -1.88
SMC4-224ENST00000494612 EPB41P11171 864 aaKnown RBP3.3□□□□□ -1.88
SMC4-224ENST00000494612 KIF5BP33176 963 aa3.3□□□□□ -1.88
SMC4-224ENST00000494612 NF2P35240 595 aa3.3□□□□□ -1.88
SMC4-224ENST00000494612 XCR1P46094 333 aa3.3□□□□□ -1.88
SMC4-224ENST00000494612 NTHL1P78549 312 aa3.3□□□□□ -1.88
SMC4-224ENST00000494612 ST3GAL3Q11203 375 aa3.3□□□□□ -1.88
SMC4-224ENST00000494612 KCNJ11Q14654 390 aa3.3□□□□□ -1.88
SMC4-224ENST00000494612 GLYR1Q49A26 553 aaPredicted RBP3.3□□□□□ -1.88
SMC4-224ENST00000494612 TEX44Q53QW1 395 aa3.3□□□□□ -1.88
SMC4-224ENST00000494612 SLC22A10Q63ZE4 541 aa3.3□□□□□ -1.88
SMC4-224ENST00000494612 BLOC1S2Q6QNY1 142 aa3.3□□□□□ -1.88
SMC4-224ENST00000494612 CBLN3Q6UW01 205 aa3.3□□□□□ -1.88
SMC4-224ENST00000494612 C2orf66Q6UXQ4 117 aa3.3□□□□□ -1.88
SMC4-224ENST00000494612 DPY19L4Q7Z388 723 aa3.3□□□□□ -1.88
SMC4-224ENST00000494612 KIAA1328Q86T90 577 aa3.3□□□□□ -1.88
SMC4-224ENST00000494612 GPR65Q8IYL9 337 aa3.3□□□□□ -1.88
SMC4-224ENST00000494612 CNPY4Q8N129 248 aa3.3□□□□□ -1.88
SMC4-224ENST00000494612 ZSCAN4Q8NAM6 433 aaPredicted RBP3.3□□□□□ -1.88
SMC4-224ENST00000494612 MRAPQ8TCY5 172 aa3.3□□□□□ -1.88
SMC4-224ENST00000494612 RSPH1Q8WYR4 309 aa3.3□□□□□ -1.88
SMC4-224ENST00000494612 SDSLQ96GA7 329 aa3.3□□□□□ -1.88
SMC4-224ENST00000494612 VSIG2Q96IQ7 327 aa3.3□□□□□ -1.88
SMC4-224ENST00000494612 C4orf36Q96KX1 117 aa3.3□□□□□ -1.88
SMC4-224ENST00000494612 NOL4LQ96MY1 436 aaPredicted RBP3.3□□□□□ -1.88
SMC4-224ENST00000494612 SIGLEC12Q96PQ1 595 aa3.3□□□□□ -1.88
SMC4-224ENST00000494612 MRPL13Q9BYD1 178 aaKnown RBP3.3□□□□□ -1.88
SMC4-224ENST00000494612 DEFB126Q9BYW3 111 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms