RNA–Protein interactions for RNA: ENST00000492977.5

PTPN7-216, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 1,595 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-216ENST00000492977 ZNF620Q6ZNG0 422 aa12.94□□□□□ -0.34
PTPN7-216ENST00000492977 ZBTB44Q8NCP5 570 aa12.94□□□□□ -0.34
PTPN7-216ENST00000492977 OR8D4Q8NGM9 314 aa12.94□□□□□ -0.34
PTPN7-216ENST00000492977 FGF11Q92914 225 aa12.94□□□□□ -0.34
PTPN7-216ENST00000492977 GFM1Q96RP9 751 aaKnown RBP12.94□□□□□ -0.34
PTPN7-216ENST00000492977 NUDT9Q9BW91 350 aa12.94□□□□□ -0.34
PTPN7-216ENST00000492977 TSSK6Q9BXA6 273 aa12.94□□□□□ -0.34
PTPN7-216ENST00000492977 NXF5Q9H1B4 397 aaKnown RBP12.94□□□□□ -0.34
PTPN7-216ENST00000492977 SYNDIG1Q9H7V2 258 aa12.94□□□□□ -0.34
PTPN7-216ENST00000492977 SLC22A11Q9NSA0 550 aa12.94□□□□□ -0.34
PTPN7-216ENST00000492977 TBC1D23Q9NUY8 699 aa12.94□□□□□ -0.34
PTPN7-216ENST00000492977 SIDT1Q9NXL6 827 aaKnown RBP12.94□□□□□ -0.34
PTPN7-216ENST00000492977 DNAJC27Q9NZQ0 273 aa12.94□□□□□ -0.34
PTPN7-216ENST00000492977 FLRT3Q9NZU0 649 aa12.94□□□□□ -0.34
PTPN7-216ENST00000492977 COPS7AQ9UBW8 275 aa12.94□□□□□ -0.34
PTPN7-216ENST00000492977 CTSFQ9UBX1 484 aa12.94□□□□□ -0.34
PTPN7-216ENST00000492977 MED31Q9Y3C7 131 aa12.94□□□□□ -0.34
PTPN7-216ENST00000492977 CDH10Q9Y6N8 788 aa12.94□□□□□ -0.34
PTPN7-216ENST00000492977 COL5A1P20908 1838 aaPredicted RBP12.93□□□□□ -0.34
PTPN7-216ENST00000492977 FER1L5A0AVI2 2057 aa12.93□□□□□ -0.34
PTPN7-216ENST00000492977 C2orf92A0A1B0GVN3 265 aa12.93□□□□□ -0.34
PTPN7-216ENST00000492977 A0A1B0GWA3 101 aa12.93□□□□□ -0.34
PTPN7-216ENST00000492977 SNTNA6NMZ2 147 aa12.93□□□□□ -0.34
PTPN7-216ENST00000492977 TO15178 435 aa12.93□□□□□ -0.34
PTPN7-216ENST00000492977 CNOT3O75175 753 aaKnown RBP12.93□□□□□ -0.34
PTPN7-216ENST00000492977 SCRG1O75711 98 aa12.93□□□□□ -0.34
PTPN7-216ENST00000492977 LCKP06239 509 aa12.93□□□□□ -0.34
PTPN7-216ENST00000492977 ZGLP1P0C6A0 271 aa12.93□□□□□ -0.34
PTPN7-216ENST00000492977 CTBP2P56545 445 aa12.93□□□□□ -0.34
PTPN7-216ENST00000492977 DCDP81605 110 aaKnown RBP12.93□□□□□ -0.34
PTPN7-216ENST00000492977 TRA2AQ13595 282 aaKnown RBP eCLIP12.93□□□□□ -0.34
PTPN7-216ENST00000492977 HLA-DQA1Q5Y7H0 255 aa12.93□□□□□ -0.34
PTPN7-216ENST00000492977 PWWP2BQ6NUJ5 590 aa12.93□□□□□ -0.34
PTPN7-216ENST00000492977 RPL13AP3Q6NVV1 102 aa12.93□□□□□ -0.34
PTPN7-216ENST00000492977 ULK3Q6PHR2 472 aa12.93□□□□□ -0.34
PTPN7-216ENST00000492977 SLC16A12Q6ZSM3 486 aa12.93□□□□□ -0.34
PTPN7-216ENST00000492977 TMPRSS11FQ6ZWK6 438 aa12.93□□□□□ -0.34
PTPN7-216ENST00000492977 PRSS58Q8IYP2 241 aa12.93□□□□□ -0.34
PTPN7-216ENST00000492977 CYP4Z2PQ8N1L4 340 aa12.93□□□□□ -0.34
PTPN7-216ENST00000492977 OR1N1Q8NGS0 311 aa12.93□□□□□ -0.34
PTPN7-216ENST00000492977 TMEM163Q8TC26 289 aa12.93□□□□□ -0.34
PTPN7-216ENST00000492977 RNF217Q8TC41 542 aa12.93□□□□□ -0.34
PTPN7-216ENST00000492977 STT3BQ8TCJ2 826 aa12.93□□□□□ -0.34
PTPN7-216ENST00000492977 BRIX1Q8TDN6 353 aaKnown RBP12.93□□□□□ -0.34
PTPN7-216ENST00000492977 ZNF426Q9BUY5 554 aa12.93□□□□□ -0.34
PTPN7-216ENST00000492977 MED17Q9NVC6 651 aa12.93□□□□□ -0.34
PTPN7-216ENST00000492977 SELENONQ9NZV5 590 aa12.93□□□□□ -0.34
PTPN7-216ENST00000492977 NTN3O00634 580 aaPredicted RBP12.92□□□□□ -0.34
PTPN7-216ENST00000492977 CDC42EP2O14613 210 aa12.92□□□□□ -0.34
PTPN7-216ENST00000492977 MAN1A2O60476 641 aa12.92□□□□□ -0.34
PTPN7-216ENST00000492977 HMGN1P05114 100 aa12.92□□□□□ -0.34
PTPN7-216ENST00000492977 SP9P0CG40 484 aa12.92□□□□□ -0.34
PTPN7-216ENST00000492977 IFI30P13284 250 aa12.92□□□□□ -0.34
PTPN7-216ENST00000492977 HPGDP15428 266 aa12.92□□□□□ -0.34
PTPN7-216ENST00000492977 PSPHP78330 225 aa12.92□□□□□ -0.34
PTPN7-216ENST00000492977 NFATC3Q12968 1075 aa12.92□□□□□ -0.34
PTPN7-216ENST00000492977 EBPQ15125 230 aaKnown RBP12.92□□□□□ -0.34
PTPN7-216ENST00000492977 SYT14P1Q58G82 188 aa12.92□□□□□ -0.34
PTPN7-216ENST00000492977 ALG10BQ5I7T1 473 aa12.92□□□□□ -0.34
PTPN7-216ENST00000492977 RNLSQ5VYX0 342 aa12.92□□□□□ -0.34
PTPN7-216ENST00000492977 LINC00114Q6XXX2 140 aa12.92□□□□□ -0.34
PTPN7-216ENST00000492977 PPP1R3BQ86XI6 285 aa12.92□□□□□ -0.34
PTPN7-216ENST00000492977 SLC38A9Q8NBW4 561 aa12.92□□□□□ -0.34
PTPN7-216ENST00000492977 C17orf47Q8NEP4 570 aa12.92□□□□□ -0.34
PTPN7-216ENST00000492977 EFHD2Q96C19 240 aaPredicted RBP12.92□□□□□ -0.34
PTPN7-216ENST00000492977 BPIFA2Q96DR5 249 aa12.92□□□□□ -0.34
PTPN7-216ENST00000492977 LRR1Q96L50 414 aa12.92□□□□□ -0.34
PTPN7-216ENST00000492977 ZNF582Q96NG8 517 aaPredicted RBP12.92□□□□□ -0.34
PTPN7-216ENST00000492977 GTPBP2Q9BX10 602 aaKnown RBP12.92□□□□□ -0.34
PTPN7-216ENST00000492977 TIMMDC1Q9NPL8 285 aa12.92□□□□□ -0.34
PTPN7-216ENST00000492977 RPS6KB2Q9UBS0 482 aa12.92□□□□□ -0.34
PTPN7-216ENST00000492977 A0A1W2PPW3 197 aa12.91□□□□□ -0.34
PTPN7-216ENST00000492977 IRGMA1A4Y4 181 aa12.91□□□□□ -0.34
PTPN7-216ENST00000492977 SCDO00767 359 aa12.91□□□□□ -0.34
PTPN7-216ENST00000492977 ADAM11O75078 769 aa12.91□□□□□ -0.34
PTPN7-216ENST00000492977 GABARAPO95166 117 aa12.91□□□□□ -0.34
PTPN7-216ENST00000492977 RCBTB2O95199 551 aa12.91□□□□□ -0.34
PTPN7-216ENST00000492977 UTS2O95399 124 aa12.91□□□□□ -0.34
PTPN7-216ENST00000492977 TIAF1O95411 115 aa12.91□□□□□ -0.34
PTPN7-216ENST00000492977 ZNF883P0CG24 379 aa12.91□□□□□ -0.34
PTPN7-216ENST00000492977 ADORA3P0DMS8 318 aa12.91□□□□□ -0.34
PTPN7-216ENST00000492977 DBTP11182 482 aaKnown RBP12.91□□□□□ -0.34
PTPN7-216ENST00000492977 MAKP20794 623 aa12.91□□□□□ -0.34
PTPN7-216ENST00000492977 TBXA2RP21731 343 aa12.91□□□□□ -0.34
PTPN7-216ENST00000492977 ZNF91Q05481 1191 aa12.91□□□□□ -0.34
PTPN7-216ENST00000492977 DYNC1I2Q13409 638 aaKnown RBP12.91□□□□□ -0.34
PTPN7-216ENST00000492977 IL11RAQ14626 422 aa12.91□□□□□ -0.34
PTPN7-216ENST00000492977 CTF1Q16619 201 aa12.91□□□□□ -0.34
PTPN7-216ENST00000492977 TMEM44Q2T9K0 475 aa12.91□□□□□ -0.34
PTPN7-216ENST00000492977 PGGHGQ32M88 737 aa12.91□□□□□ -0.34
PTPN7-216ENST00000492977 PHF19Q5T6S3 580 aa12.91□□□□□ -0.34
PTPN7-216ENST00000492977 FNDC7Q5VTL7 733 aa12.91□□□□□ -0.34
PTPN7-216ENST00000492977 SLC29A4Q7RTT9 530 aa12.91□□□□□ -0.34
PTPN7-216ENST00000492977 ZNF367Q7RTV3 350 aa12.91□□□□□ -0.34
PTPN7-216ENST00000492977 OVCH1Q7RTY7 1134 aa12.91□□□□□ -0.34
PTPN7-216ENST00000492977 BMP8AQ7Z5Y6 402 aa12.91□□□□□ -0.34
PTPN7-216ENST00000492977 P2RY8Q86VZ1 359 aa12.91□□□□□ -0.34
PTPN7-216ENST00000492977 C9orf40Q8IXQ3 194 aa12.91□□□□□ -0.34
PTPN7-216ENST00000492977 FAM71CQ8NEG0 241 aa12.91□□□□□ -0.34
PTPN7-216ENST00000492977 OR2T33Q8NG76 320 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms