RNA–Protein interactions for RNA: ENST00000491867.5

ATG4B-222, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 435 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-222ENST00000491867 MIDNQ504T8 468 aa12.17□□□□□ -0.46
ATG4B-222ENST00000491867 SPIN4Q56A73 249 aa12.17□□□□□ -0.46
ATG4B-222ENST00000491867 ZNF678Q5SXM1 525 aa12.17□□□□□ -0.46
ATG4B-222ENST00000491867 ACSM2BQ68CK6 577 aa12.17□□□□□ -0.46
ATG4B-222ENST00000491867 KLHL17Q6TDP4 642 aa12.17□□□□□ -0.46
ATG4B-222ENST00000491867 RINLQ6ZS11 566 aa12.17□□□□□ -0.46
ATG4B-222ENST00000491867 GPRIN3Q6ZVF9 776 aa12.17□□□□□ -0.46
ATG4B-222ENST00000491867 FCRLAQ7L513 359 aa12.17□□□□□ -0.46
ATG4B-222ENST00000491867 OR52N5Q8NH56 324 aa12.17□□□□□ -0.46
ATG4B-222ENST00000491867 FAM110BQ8TC76 370 aa12.17□□□□□ -0.46
ATG4B-222ENST00000491867 FAM216AQ8WUB2 273 aa12.17□□□□□ -0.46
ATG4B-222ENST00000491867 CPNE4Q96A23 557 aaPredicted RBP12.17□□□□□ -0.46
ATG4B-222ENST00000491867 ZBTB8AQ96BR9 441 aa12.17□□□□□ -0.46
ATG4B-222ENST00000491867 SORCS2Q96PQ0 1159 aa12.17□□□□□ -0.46
ATG4B-222ENST00000491867 TMEM237Q96Q45 408 aa12.17□□□□□ -0.46
ATG4B-222ENST00000491867 BPESC1Q9GZL8 116 aa12.17□□□□□ -0.46
ATG4B-222ENST00000491867 TIGARQ9NQ88 270 aa12.17□□□□□ -0.46
ATG4B-222ENST00000491867 SLC35C2Q9NQQ7 365 aa12.17□□□□□ -0.46
ATG4B-222ENST00000491867 MED17Q9NVC6 651 aa12.17□□□□□ -0.46
ATG4B-222ENST00000491867 TMPRSS2O15393 492 aa12.16□□□□□ -0.46
ATG4B-222ENST00000491867 SUPT7LO94864 414 aa12.16□□□□□ -0.46
ATG4B-222ENST00000491867 TAC1P20366 129 aa12.16□□□□□ -0.46
ATG4B-222ENST00000491867 COX5AP20674 150 aa12.16□□□□□ -0.46
ATG4B-222ENST00000491867 EDNRAP25101 427 aa12.16□□□□□ -0.46
ATG4B-222ENST00000491867 TIA1P31483 386 aaKnown RBP eCLIP12.16□□□□□ -0.46
ATG4B-222ENST00000491867 IL2RGP31785 369 aa12.16□□□□□ -0.46
ATG4B-222ENST00000491867 MPIP34949 423 aa12.16□□□□□ -0.46
ATG4B-222ENST00000491867 HTR6P50406 440 aa12.16□□□□□ -0.46
ATG4B-222ENST00000491867 ZNF41P51814 821 aaPredicted RBP12.16□□□□□ -0.46
ATG4B-222ENST00000491867 MANFP55145 182 aaKnown RBP12.16□□□□□ -0.46
ATG4B-222ENST00000491867 GRAMD1BQ3KR37 738 aa12.16□□□□□ -0.46
ATG4B-222ENST00000491867 UNC50Q53HI1 259 aa12.16□□□□□ -0.46
ATG4B-222ENST00000491867 TEX35Q5T0J7 233 aa12.16□□□□□ -0.46
ATG4B-222ENST00000491867 GALNT18Q6P9A2 607 aa12.16□□□□□ -0.46
ATG4B-222ENST00000491867 TRABD2AQ86V40 505 aa12.16□□□□□ -0.46
ATG4B-222ENST00000491867 FAM9CQ8IZT9 166 aa12.16□□□□□ -0.46
ATG4B-222ENST00000491867 POC1BQ8TC44 478 aa12.16□□□□□ -0.46
ATG4B-222ENST00000491867 METTL6Q8TCB7 284 aa12.16□□□□□ -0.46
ATG4B-222ENST00000491867 C16orf78Q8WTQ4 265 aa12.16□□□□□ -0.46
ATG4B-222ENST00000491867 APIPQ96GX9 242 aa12.16□□□□□ -0.46
ATG4B-222ENST00000491867 FMO2Q99518 471 aa12.16□□□□□ -0.46
ATG4B-222ENST00000491867 EBPLQ9BY08 206 aa12.16□□□□□ -0.46
ATG4B-222ENST00000491867 SHCBP1LQ9BZQ2 653 aa12.16□□□□□ -0.46
ATG4B-222ENST00000491867 ZNF696Q9H7X3 374 aa12.16□□□□□ -0.46
ATG4B-222ENST00000491867 MYNNQ9NPC7 610 aa12.16□□□□□ -0.46
ATG4B-222ENST00000491867 CMYA5Q8N3K9 4069 aa12.16□□□□□ -0.46
ATG4B-222ENST00000491867 C9JVG2 144 aa12.15□□□□□ -0.46
ATG4B-222ENST00000491867 M0R1B8 84 aa12.15□□□□□ -0.46
ATG4B-222ENST00000491867 COQ9O75208 318 aa12.15□□□□□ -0.46
ATG4B-222ENST00000491867 SNRPAP09012 282 aaKnown RBP12.15□□□□□ -0.46
ATG4B-222ENST00000491867 APEX1P27695 318 aaKnown RBP12.15□□□□□ -0.46
ATG4B-222ENST00000491867 ECHS1P30084 290 aa12.15□□□□□ -0.46
ATG4B-222ENST00000491867 HMOX2P30519 316 aa12.15□□□□□ -0.46
ATG4B-222ENST00000491867 APOBEC3AP31941 199 aaPredicted RBP12.15□□□□□ -0.46
ATG4B-222ENST00000491867 GSTM5P46439 218 aa12.15□□□□□ -0.46
ATG4B-222ENST00000491867 LGALS3BPQ08380 585 aa12.15□□□□□ -0.46
ATG4B-222ENST00000491867 LCP2Q13094 533 aa12.15□□□□□ -0.46
ATG4B-222ENST00000491867 PDCD2Q16342 344 aaPredicted RBP12.15□□□□□ -0.46
ATG4B-222ENST00000491867 PEG10Q86TG7 708 aaKnown RBP12.15□□□□□ -0.46
ATG4B-222ENST00000491867 ZNF433Q8N7K0 673 aaPredicted RBP12.15□□□□□ -0.46
ATG4B-222ENST00000491867 ANKS4BQ8N8V4 417 aa12.15□□□□□ -0.46
ATG4B-222ENST00000491867 LINC01356Q8N9X3 169 aa12.15□□□□□ -0.46
ATG4B-222ENST00000491867 GATSQ8NAP1 163 aa12.15□□□□□ -0.46
ATG4B-222ENST00000491867 ZNF540Q8NDQ6 660 aa12.15□□□□□ -0.46
ATG4B-222ENST00000491867 ZNF775Q96BV0 537 aaPredicted RBP12.15□□□□□ -0.46
ATG4B-222ENST00000491867 FBXO17Q96EF6 278 aa12.15□□□□□ -0.46
ATG4B-222ENST00000491867 KLHDC3Q9BQ90 382 aa12.15□□□□□ -0.46
ATG4B-222ENST00000491867 C1QTNF6Q9BXI9 259 aa12.15□□□□□ -0.46
ATG4B-222ENST00000491867 CXorf36Q9H7Y0 433 aa12.15□□□□□ -0.46
ATG4B-222ENST00000491867 Q9N2J8 555 aa12.15□□□□□ -0.46
ATG4B-222ENST00000491867 DMGDHQ9UI17 866 aaKnown RBP12.15□□□□□ -0.46
ATG4B-222ENST00000491867 MRTO4Q9UKD2 239 aaKnown RBP12.15□□□□□ -0.46
ATG4B-222ENST00000491867 NFU1Q9UMS0 254 aa12.15□□□□□ -0.46
ATG4B-222ENST00000491867 STK38LQ9Y2H1 464 aa12.15□□□□□ -0.46
ATG4B-222ENST00000491867 SLC25A15Q9Y619 301 aa12.15□□□□□ -0.46
ATG4B-222ENST00000491867 A0A087WUV0 522 aaPredicted RBP12.14□□□□□ -0.47
ATG4B-222ENST00000491867 A0A087WV62 115 aa12.14□□□□□ -0.47
ATG4B-222ENST00000491867 IGHV3-15A0A0B4J1V0 119 aa12.14□□□□□ -0.47
ATG4B-222ENST00000491867 NPIPA5A0A0B4J1W7 369 aa12.14□□□□□ -0.47
ATG4B-222ENST00000491867 EXOC1LA0A1B0GW35 172 aa12.14□□□□□ -0.47
ATG4B-222ENST00000491867 A0A1W2PR80 420 aa12.14□□□□□ -0.47
ATG4B-222ENST00000491867 MYO1GB0I1T2 1018 aa12.14□□□□□ -0.47
ATG4B-222ENST00000491867 NPIPA7E9PJI5 369 aa12.14□□□□□ -0.47
ATG4B-222ENST00000491867 RAD51DO75771 328 aa12.14□□□□□ -0.47
ATG4B-222ENST00000491867 SLITRK5O94991 958 aa12.14□□□□□ -0.47
ATG4B-222ENST00000491867 ENO1P06733 434 aaKnown RBP12.14□□□□□ -0.47
ATG4B-222ENST00000491867 ANXA4P09525 319 aaPredicted RBP12.14□□□□□ -0.47
ATG4B-222ENST00000491867 NPIPA8P0DM63 369 aa12.14□□□□□ -0.47
ATG4B-222ENST00000491867 DDCP20711 480 aa12.14□□□□□ -0.47
ATG4B-222ENST00000491867 IMPDH1P20839 514 aa12.14□□□□□ -0.47
ATG4B-222ENST00000491867 ENPP1P22413 925 aa12.14□□□□□ -0.47
ATG4B-222ENST00000491867 PSMD4P55036 377 aaKnown RBP12.14□□□□□ -0.47
ATG4B-222ENST00000491867 PKNOX1P55347 436 aa12.14□□□□□ -0.47
ATG4B-222ENST00000491867 ZNF763Q0D2J5 394 aa12.14□□□□□ -0.47
ATG4B-222ENST00000491867 MST1LQ2TV78 715 aa12.14□□□□□ -0.47
ATG4B-222ENST00000491867 AWAT1Q58HT5 328 aa12.14□□□□□ -0.47
ATG4B-222ENST00000491867 ARL13AQ5H913 290 aaPredicted RBP12.14□□□□□ -0.47
ATG4B-222ENST00000491867 LCA5Q86VQ0 697 aa12.14□□□□□ -0.47
ATG4B-222ENST00000491867 SLC43A2Q8N370 569 aa12.14□□□□□ -0.47
ATG4B-222ENST00000491867 ACTRT2Q8TDY3 377 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms