RNA–Protein interactions for RNA: ENST00000491165.5

USF3-203, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USF3, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-203ENST00000491165 OR4N5Q8IXE1 308 aa21.06■□□□□ 0.96
USF3-203ENST00000491165 CACTIN-AS1Q8N1I8 211 aa21.06■□□□□ 0.96
USF3-203ENST00000491165 NANOGP1Q8N7R0 232 aa21.06■□□□□ 0.96
USF3-203ENST00000491165 PROKR2Q8NFJ6 384 aa21.06■□□□□ 0.96
USF3-203ENST00000491165 SLC7A13Q8TCU3 470 aa21.06■□□□□ 0.96
USF3-203ENST00000491165 FUZQ9BT04 418 aa21.06■□□□□ 0.96
USF3-203ENST00000491165 BARHL1Q9BZE3 327 aa21.06■□□□□ 0.96
USF3-203ENST00000491165 POLR2J2Q9GZM3 115 aaKnown RBP21.06■□□□□ 0.96
USF3-203ENST00000491165 TRPC4Q9UBN4 977 aa21.06■□□□□ 0.96
USF3-203ENST00000491165 PHF11Q9UIL8 331 aa21.06■□□□□ 0.96
USF3-203ENST00000491165 ZNF670-ZNF695F2Z2N8 137 aa21.05■□□□□ 0.96
USF3-203ENST00000491165 BUD31P41223 144 aaPredicted RBP21.05■□□□□ 0.96
USF3-203ENST00000491165 GSTM5P46439 218 aa21.05■□□□□ 0.96
USF3-203ENST00000491165 CCT3P49368 545 aaKnown RBP21.05■□□□□ 0.96
USF3-203ENST00000491165 ARHGAP40Q5TG30 622 aa21.05■□□□□ 0.96
USF3-203ENST00000491165 AGAP6Q5VW22 663 aa21.05■□□□□ 0.96
USF3-203ENST00000491165 SLC48A1Q6P1K1 146 aa21.05■□□□□ 0.96
USF3-203ENST00000491165 SPATC1Q76KD6 591 aa21.05■□□□□ 0.96
USF3-203ENST00000491165 WDR53Q7Z5U6 358 aaPredicted RBP21.05■□□□□ 0.96
USF3-203ENST00000491165 OR9Q1Q8NGQ5 310 aa21.05■□□□□ 0.96
USF3-203ENST00000491165 SETD6Q8TBK2 473 aa21.05■□□□□ 0.96
USF3-203ENST00000491165 AGAP4Q96P64 663 aa21.05■□□□□ 0.96
USF3-203ENST00000491165 TREX2Q9BQ50 279 aaPredicted RBP21.05■□□□□ 0.96
USF3-203ENST00000491165 P2RX2Q9UBL9 471 aa21.05■□□□□ 0.96
USF3-203ENST00000491165 TGFBR3LH3BV60 316 aa21.05■□□□□ 0.96
USF3-203ENST00000491165 MYL12BO14950 172 aa21.05■□□□□ 0.96
USF3-203ENST00000491165 NME6O75414 186 aaPredicted RBP21.05■□□□□ 0.96
USF3-203ENST00000491165 STK17BO94768 372 aa21.05■□□□□ 0.96
USF3-203ENST00000491165 C8orf89P0DMQ9 161 aa21.05■□□□□ 0.96
USF3-203ENST00000491165 FBLP22087 321 aaKnown RBP21.05■□□□□ 0.96
USF3-203ENST00000491165 PTGER1P34995 402 aa21.05■□□□□ 0.96
USF3-203ENST00000491165 SKP1P63208 163 aa21.05■□□□□ 0.96
USF3-203ENST00000491165 ALDH6A1Q02252 535 aaKnown RBP21.05■□□□□ 0.96
USF3-203ENST00000491165 ID2Q02363 134 aa21.05■□□□□ 0.96
USF3-203ENST00000491165 MLLT11Q13015 90 aaPredicted RBP21.05■□□□□ 0.96
USF3-203ENST00000491165 NKAIN1Q4KMZ8 207 aa21.05■□□□□ 0.96
USF3-203ENST00000491165 TIPARPQ7Z3E1 657 aaKnown RBP21.05■□□□□ 0.96
USF3-203ENST00000491165 GALNT6Q8NCL4 622 aa21.05■□□□□ 0.96
USF3-203ENST00000491165 CNRIP1Q96F85 164 aaPredicted RBP21.05■□□□□ 0.96
USF3-203ENST00000491165 WFDC6Q9BQY6 131 aa21.05■□□□□ 0.96
USF3-203ENST00000491165 DDA1Q9BW61 102 aa21.05■□□□□ 0.96
USF3-203ENST00000491165 YIPF2Q9BWQ6 316 aa21.05■□□□□ 0.96
USF3-203ENST00000491165 SPRY4Q9C004 299 aa21.05■□□□□ 0.96
USF3-203ENST00000491165 NPAP1Q9NZP6 1156 aa21.05■□□□□ 0.96
USF3-203ENST00000491165 TBC1D24Q9ULP9 559 aa21.05■□□□□ 0.96
USF3-203ENST00000491165 CLDN16Q9Y5I7 305 aa21.05■□□□□ 0.96
USF3-203ENST00000491165 SSX4O60224 188 aa21.04■□□□□ 0.96
USF3-203ENST00000491165 TNFSF15O95150 251 aa21.04■□□□□ 0.96
USF3-203ENST00000491165 HBQ1P09105 142 aa21.04■□□□□ 0.96
USF3-203ENST00000491165 RNH1P13489 461 aaKnown RBP21.04■□□□□ 0.96
USF3-203ENST00000491165 DRD2P14416 443 aa21.04■□□□□ 0.96
USF3-203ENST00000491165 TNNI3P19429 210 aa21.04■□□□□ 0.96
USF3-203ENST00000491165 BTG2P78543 158 aa21.04■□□□□ 0.96
USF3-203ENST00000491165 FAM69BQ5VUD6 431 aa21.04■□□□□ 0.96
USF3-203ENST00000491165 LAPTM4BQ86VI4 370 aa21.04■□□□□ 0.96
USF3-203ENST00000491165 GPR151Q8TDV0 419 aa21.04■□□□□ 0.96
USF3-203ENST00000491165 ZNF764Q96H86 408 aaPredicted RBP21.04■□□□□ 0.96
USF3-203ENST00000491165 SERHL2Q9H4I8 314 aa21.04■□□□□ 0.96
USF3-203ENST00000491165 LANCL2Q9NS86 450 aa21.04■□□□□ 0.96
USF3-203ENST00000491165 SNTG1Q9NSN8 517 aa21.04■□□□□ 0.96
USF3-203ENST00000491165 TVP23BQ9NYZ1 205 aa21.04■□□□□ 0.96
USF3-203ENST00000491165 A4GNTQ9UNA3 340 aa21.04■□□□□ 0.96
USF3-203ENST00000491165 SSR3Q9UNL2 185 aa21.04■□□□□ 0.96
USF3-203ENST00000491165 FGF17O60258 216 aa21.04■□□□□ 0.96
USF3-203ENST00000491165 TPST2O60704 377 aa21.04■□□□□ 0.96
USF3-203ENST00000491165 DCDP81605 110 aaKnown RBP21.04■□□□□ 0.96
USF3-203ENST00000491165 RUNX1T1Q06455 604 aa21.04■□□□□ 0.96
USF3-203ENST00000491165 SYPL1Q16563 259 aa21.04■□□□□ 0.96
USF3-203ENST00000491165 TMPRSS11AQ6ZMR5 421 aa21.04■□□□□ 0.96
USF3-203ENST00000491165 ZNF517Q6ZMY9 492 aaPredicted RBP21.04■□□□□ 0.96
USF3-203ENST00000491165 BCDIN3DQ7Z5W3 292 aaKnown RBP21.04■□□□□ 0.96
USF3-203ENST00000491165 ASB15Q8WXK1 588 aa21.04■□□□□ 0.96
USF3-203ENST00000491165 TRMT61AQ96FX7 289 aaKnown RBP21.04■□□□□ 0.96
USF3-203ENST00000491165 FAIM2Q9BWQ8 316 aa21.04■□□□□ 0.96
USF3-203ENST00000491165 ACSS1Q9NUB1 689 aaPredicted RBP21.04■□□□□ 0.96
USF3-203ENST00000491165 A0A1W2PRQ8 180 aa21.03■□□□□ 0.96
USF3-203ENST00000491165 GUCY1B2O75343 617 aa21.03■□□□□ 0.96
USF3-203ENST00000491165 ERAL1O75616 437 aaKnown RBP21.03■□□□□ 0.96
USF3-203ENST00000491165 CCNKO75909 580 aa21.03■□□□□ 0.96
USF3-203ENST00000491165 TP53P04637 393 aaPredicted RBP21.03■□□□□ 0.96
USF3-203ENST00000491165 FHP07954 510 aa21.03■□□□□ 0.96
USF3-203ENST00000491165 OR12D1P0DN82 309 aa21.03■□□□□ 0.96
USF3-203ENST00000491165 NKX2-5P52952 324 aaPredicted RBP21.03■□□□□ 0.96
USF3-203ENST00000491165 OR2B6P58173 313 aa21.03■□□□□ 0.96
USF3-203ENST00000491165 GABREP78334 506 aa21.03■□□□□ 0.96
USF3-203ENST00000491165 PIN1Q13526 163 aaPredicted RBP21.03■□□□□ 0.96
USF3-203ENST00000491165 PODNL1Q6PEZ8 512 aa21.03■□□□□ 0.96
USF3-203ENST00000491165 SHISA6Q6ZSJ9 500 aa21.03■□□□□ 0.96
USF3-203ENST00000491165 PRSS58Q8IYP2 241 aa21.03■□□□□ 0.96
USF3-203ENST00000491165 IQCF1Q8N6M8 205 aa21.03■□□□□ 0.96
USF3-203ENST00000491165 SLC35G5Q96KT7 338 aa21.03■□□□□ 0.96
USF3-203ENST00000491165 WDFY2Q96P53 400 aa21.03■□□□□ 0.96
USF3-203ENST00000491165 POLDIP3Q9BY77 421 aaKnown RBP21.03■□□□□ 0.96
USF3-203ENST00000491165 V9GYH0 126 aa21.03■□□□□ 0.96
USF3-203ENST00000491165 PPP2R1BP30154 601 aa21.02■□□□□ 0.96
USF3-203ENST00000491165 COX10Q12887 443 aa21.02■□□□□ 0.96
USF3-203ENST00000491165 RSBN1Q5VWQ0 802 aaPredicted RBP21.02■□□□□ 0.96
USF3-203ENST00000491165 ZNF544Q6NX49 715 aa21.02■□□□□ 0.96
USF3-203ENST00000491165 SZRD1Q7Z422 152 aa21.02■□□□□ 0.96
USF3-203ENST00000491165 PHC2Q8IXK0 858 aa21.02■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms