RNA–Protein interactions for RNA: ENST00000490653.1

PRPF4B-208, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 2

Gene PRPF4B, Length 581 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-208ENST00000490653 TBXA2RP21731 343 aa6.56□□□□□ -1.36
PRPF4B-208ENST00000490653 GCKP35557 465 aa6.56□□□□□ -1.36
PRPF4B-208ENST00000490653 ASMTP46597 345 aa6.56□□□□□ -1.36
PRPF4B-208ENST00000490653 PRIM2P49643 509 aa6.56□□□□□ -1.36
PRPF4B-208ENST00000490653 NME5P56597 212 aa6.56□□□□□ -1.36
PRPF4B-208ENST00000490653 ABCE1P61221 599 aaKnown RBP6.56□□□□□ -1.36
PRPF4B-208ENST00000490653 RPS26P62854 115 aaKnown RBP6.56□□□□□ -1.36
PRPF4B-208ENST00000490653 HBA1P69905 142 aa6.56□□□□□ -1.36
PRPF4B-208ENST00000490653 POU6F2P78424 691 aaPredicted RBP6.56□□□□□ -1.36
PRPF4B-208ENST00000490653 EMX2Q04743 252 aa6.56□□□□□ -1.36
PRPF4B-208ENST00000490653 C17orf67Q0P5P2 114 aa6.56□□□□□ -1.36
PRPF4B-208ENST00000490653 FOXD4Q12950 439 aaPredicted RBP6.56□□□□□ -1.36
PRPF4B-208ENST00000490653 MLC1Q15049 377 aa6.56□□□□□ -1.36
PRPF4B-208ENST00000490653 PON3Q15166 354 aa6.56□□□□□ -1.36
PRPF4B-208ENST00000490653 SF3B4Q15427 424 aaKnown RBP eCLIP6.56□□□□□ -1.367e-8■□□□□ 11.3
PRPF4B-208ENST00000490653 PDCD2Q16342 344 aaPredicted RBP6.56□□□□□ -1.36
PRPF4B-208ENST00000490653 CPEB4Q17RY0 729 aaKnown RBP eCLIP6.56□□□□□ -1.36
PRPF4B-208ENST00000490653 CTU2Q2VPK5 515 aaKnown RBP6.56□□□□□ -1.36
PRPF4B-208ENST00000490653 PGS1Q32NB8 556 aa6.56□□□□□ -1.36
PRPF4B-208ENST00000490653 ATP6AP1LQ52LC2 224 aa6.56□□□□□ -1.36
PRPF4B-208ENST00000490653 CPTPQ5TA50 214 aa6.56□□□□□ -1.36
PRPF4B-208ENST00000490653 CDC73Q6P1J9 531 aa6.56□□□□□ -1.36
PRPF4B-208ENST00000490653 CBLN3Q6UW01 205 aa6.56□□□□□ -1.36
PRPF4B-208ENST00000490653 ZNF550Q7Z398 422 aa6.56□□□□□ -1.36
PRPF4B-208ENST00000490653 R3HCC1LQ7Z5L2 792 aaKnown RBP6.56□□□□□ -1.36
PRPF4B-208ENST00000490653 HMGN2P46Q86SG4 172 aa6.56□□□□□ -1.36
PRPF4B-208ENST00000490653 PRIMA1Q86XR5 153 aa6.56□□□□□ -1.36
PRPF4B-208ENST00000490653 TGIF2LYQ8IUE0 185 aa6.56□□□□□ -1.36
PRPF4B-208ENST00000490653 MREGQ8N565 214 aa6.56□□□□□ -1.36
PRPF4B-208ENST00000490653 COX18Q8N8Q8 333 aa6.56□□□□□ -1.36
PRPF4B-208ENST00000490653 CNEP1R1Q8N9A8 125 aa6.56□□□□□ -1.36
PRPF4B-208ENST00000490653 OR5D16Q8NGK9 328 aa6.56□□□□□ -1.36
PRPF4B-208ENST00000490653 ZFP28Q8NHY6 868 aa6.56□□□□□ -1.36
PRPF4B-208ENST00000490653 ROBO4Q8WZ75 1007 aa6.56□□□□□ -1.36
PRPF4B-208ENST00000490653 JADE3Q92613 823 aa6.56□□□□□ -1.36
PRPF4B-208ENST00000490653 MTERF3Q96E29 417 aa6.56□□□□□ -1.36
PRPF4B-208ENST00000490653 CHMP6Q96FZ7 201 aa6.56□□□□□ -1.36
PRPF4B-208ENST00000490653 PGM2Q96G03 612 aa6.56□□□□□ -1.36
PRPF4B-208ENST00000490653 ZNF764Q96H86 408 aaPredicted RBP6.56□□□□□ -1.36
PRPF4B-208ENST00000490653 ADGRG7Q96K78 797 aa6.56□□□□□ -1.36
PRPF4B-208ENST00000490653 TEX37Q96LM6 180 aa6.56□□□□□ -1.36
PRPF4B-208ENST00000490653 OR7D2Q96RA2 312 aa6.56□□□□□ -1.36
PRPF4B-208ENST00000490653 TM9SF2Q99805 663 aa6.56□□□□□ -1.36
PRPF4B-208ENST00000490653 DUSP26Q9BV47 211 aa6.56□□□□□ -1.36
PRPF4B-208ENST00000490653 CLEC4MQ9H2X3 399 aaPredicted RBP6.56□□□□□ -1.36
PRPF4B-208ENST00000490653 CENPHQ9H3R5 247 aa6.56□□□□□ -1.36
PRPF4B-208ENST00000490653 PIGUQ9H490 435 aa6.56□□□□□ -1.36
PRPF4B-208ENST00000490653 TMEM185BQ9H7F4 350 aa6.56□□□□□ -1.36
PRPF4B-208ENST00000490653 PLEKHF2Q9H8W4 249 aa6.56□□□□□ -1.36
PRPF4B-208ENST00000490653 C3orf14Q9HBI5 128 aa6.56□□□□□ -1.36
PRPF4B-208ENST00000490653 KCNK9Q9NPC2 374 aa6.56□□□□□ -1.36
PRPF4B-208ENST00000490653 SDHAF3Q9NRP4 125 aa6.56□□□□□ -1.36
PRPF4B-208ENST00000490653 MED17Q9NVC6 651 aa6.56□□□□□ -1.36
PRPF4B-208ENST00000490653 C6orf203Q9P0P8 240 aaPredicted RBP6.56□□□□□ -1.36
PRPF4B-208ENST00000490653 ST6GALNAC2Q9UJ37 374 aa6.56□□□□□ -1.36
PRPF4B-208ENST00000490653 KCNE5Q9UJ90 142 aa6.56□□□□□ -1.36
PRPF4B-208ENST00000490653 RAB21Q9UL25 225 aa6.56□□□□□ -1.36
PRPF4B-208ENST00000490653 ABCG2Q9UNQ0 655 aa6.56□□□□□ -1.36
PRPF4B-208ENST00000490653 TMED5Q9Y3A6 229 aa6.56□□□□□ -1.36
PRPF4B-208ENST00000490653 NSD1Q96L73 2696 aaPredicted RBP6.56□□□□□ -1.36
PRPF4B-208ENST00000490653 FLNAP21333 2647 aaKnown RBP6.56□□□□□ -1.36
PRPF4B-208ENST00000490653 PRAMEF27A3QJZ7 478 aa6.55□□□□□ -1.36
PRPF4B-208ENST00000490653 A6NHS1 94 aa6.55□□□□□ -1.36
PRPF4B-208ENST00000490653 SLC22A20A6NK97 555 aa6.55□□□□□ -1.36
PRPF4B-208ENST00000490653 TMEM114B3SHH9 223 aa6.55□□□□□ -1.36
PRPF4B-208ENST00000490653 EIF1AYO14602 144 aaKnown RBP6.55□□□□□ -1.36
PRPF4B-208ENST00000490653 TNFSF11O14788 317 aa6.55□□□□□ -1.36
PRPF4B-208ENST00000490653 ANKRD28O15084 1053 aa6.55□□□□□ -1.36
PRPF4B-208ENST00000490653 RGS16O15492 202 aaPredicted RBP6.55□□□□□ -1.36
PRPF4B-208ENST00000490653 CFLARO15519 480 aa6.55□□□□□ -1.36
PRPF4B-208ENST00000490653 EIF4EBP3O60516 100 aaPredicted RBP6.55□□□□□ -1.36
PRPF4B-208ENST00000490653 FCMRO60667 390 aa6.55□□□□□ -1.36
PRPF4B-208ENST00000490653 BCAS1O75363 584 aaPredicted RBP6.55□□□□□ -1.36
PRPF4B-208ENST00000490653 TNFRSF21O75509 655 aa6.55□□□□□ -1.36
PRPF4B-208ENST00000490653 CPSF4O95639 269 aaKnown RBP6.55□□□□□ -1.36
PRPF4B-208ENST00000490653 HSPA4LO95757 839 aa6.55□□□□□ -1.36
PRPF4B-208ENST00000490653 SERPINE1P05121 402 aa6.55□□□□□ -1.36
PRPF4B-208ENST00000490653 LINGO3P0C6S8 592 aa6.55□□□□□ -1.36
PRPF4B-208ENST00000490653 IL12AP29459 219 aa6.55□□□□□ -1.36
PRPF4B-208ENST00000490653 SLC1A6P48664 564 aa6.55□□□□□ -1.36
PRPF4B-208ENST00000490653 CLK3P49761 638 aaKnown RBP6.55□□□□□ -1.36
PRPF4B-208ENST00000490653 PSMD4P55036 377 aaKnown RBP6.55□□□□□ -1.36
PRPF4B-208ENST00000490653 CLDN8P56748 225 aa6.55□□□□□ -1.36
PRPF4B-208ENST00000490653 ZNF117Q03924 483 aa6.55□□□□□ -1.36
PRPF4B-208ENST00000490653 TP53BP2Q13625 1128 aa6.55□□□□□ -1.36
PRPF4B-208ENST00000490653 PLPPR5Q32ZL2 321 aa6.55□□□□□ -1.36
PRPF4B-208ENST00000490653 GLYR1Q49A26 553 aaPredicted RBP6.55□□□□□ -1.36
PRPF4B-208ENST00000490653 KLHL26Q53HC5 615 aa6.55□□□□□ -1.36
PRPF4B-208ENST00000490653 CEP85LQ5SZL2 805 aa6.55□□□□□ -1.36
PRPF4B-208ENST00000490653 LCE4AQ5TA78 99 aa6.55□□□□□ -1.36
PRPF4B-208ENST00000490653 PPP4R4Q6NUP7 873 aa6.55□□□□□ -1.36
PRPF4B-208ENST00000490653 CHMP1BQ7LBR1 199 aa6.55□□□□□ -1.36
PRPF4B-208ENST00000490653 C6orf120Q7Z4R8 191 aa6.55□□□□□ -1.36
PRPF4B-208ENST00000490653 ANKRD46Q86W74 232 aa6.55□□□□□ -1.36
PRPF4B-208ENST00000490653 CNPY4Q8N129 248 aa6.55□□□□□ -1.36
PRPF4B-208ENST00000490653 ANKRD42Q8N9B4 389 aa6.55□□□□□ -1.36
PRPF4B-208ENST00000490653 ATP6V1C2Q8NEY4 427 aa6.55□□□□□ -1.36
PRPF4B-208ENST00000490653 OR10D3Q8NH80 312 aa6.55□□□□□ -1.36
PRPF4B-208ENST00000490653 B4GALNT2Q8NHY0 566 aa6.55□□□□□ -1.36
PRPF4B-208ENST00000490653 RFWD2Q8NHY2 731 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms