RNA–Protein interactions for RNA: ENST00000490193.5

USP39-216, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5

Gene USP39, Length 1,028 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-216ENST00000490193 FAM76AQ8TAV0 307 aa7.24□□□□□ -1.25
USP39-216ENST00000490193 METTL6Q8TCB7 284 aa7.24□□□□□ -1.25
USP39-216ENST00000490193 FAM168AQ92567 244 aa7.24□□□□□ -1.25
USP39-216ENST00000490193 PIK3R3Q92569 461 aa7.24□□□□□ -1.25
USP39-216ENST00000490193 MUCL1Q96DR8 90 aa7.24□□□□□ -1.25
USP39-216ENST00000490193 ZNF764Q96H86 408 aaPredicted RBP7.24□□□□□ -1.25
USP39-216ENST00000490193 DHRS9Q9BPW9 319 aa7.24□□□□□ -1.25
USP39-216ENST00000490193 KLHDC3Q9BQ90 382 aa7.24□□□□□ -1.25
USP39-216ENST00000490193 PSD2Q9BQI7 771 aa7.24□□□□□ -1.25
USP39-216ENST00000490193 EBPLQ9BY08 206 aa7.24□□□□□ -1.25
USP39-216ENST00000490193 RAB17Q9H0T7 212 aa7.24□□□□□ -1.25
USP39-216ENST00000490193 COQ10BQ9H8M1 238 aa7.24□□□□□ -1.25
USP39-216ENST00000490193 UBQLN4Q9NRR5 601 aa7.24□□□□□ -1.25
USP39-216ENST00000490193 NPAP1Q9NZP6 1156 aa7.24□□□□□ -1.25
USP39-216ENST00000490193 ING1Q9UK53 422 aaPredicted RBP7.24□□□□□ -1.25
USP39-216ENST00000490193 MGAT4BQ9UQ53 548 aa7.24□□□□□ -1.25
USP39-216ENST00000490193 ACTL7BQ9Y614 415 aa7.24□□□□□ -1.25
USP39-216ENST00000490193 TENM1Q9UKZ4 2725 aa7.24□□□□□ -1.25
USP39-216ENST00000490193 ARFGEF3Q5TH69 2177 aa7.23□□□□□ -1.25
USP39-216ENST00000490193 GIMAP1-GIMAP5A0A087WTJ2 511 aa7.23□□□□□ -1.25
USP39-216ENST00000490193 OR5H1A6NKK0 313 aa7.23□□□□□ -1.25
USP39-216ENST00000490193 E7EQL1 145 aa7.23□□□□□ -1.25
USP39-216ENST00000490193 UBFD1O14562 309 aaKnown RBP7.23□□□□□ -1.25
USP39-216ENST00000490193 EFNA2O43921 213 aa7.23□□□□□ -1.25
USP39-216ENST00000490193 LYZL6O75951 148 aa7.23□□□□□ -1.25
USP39-216ENST00000490193 SUPT7LO94864 414 aa7.23□□□□□ -1.25
USP39-216ENST00000490193 KCNK2O95069 426 aa7.23□□□□□ -1.25
USP39-216ENST00000490193 NTN1O95631 604 aa7.23□□□□□ -1.25
USP39-216ENST00000490193 HSPA4LO95757 839 aa7.23□□□□□ -1.25
USP39-216ENST00000490193 PGRP06401 933 aa7.23□□□□□ -1.25
USP39-216ENST00000490193 PRPS2P11908 318 aa7.23□□□□□ -1.25
USP39-216ENST00000490193 USF1P22415 310 aaPredicted RBP7.23□□□□□ -1.25
USP39-216ENST00000490193 PTAFRP25105 342 aa7.23□□□□□ -1.25
USP39-216ENST00000490193 PHBP35232 272 aa7.23□□□□□ -1.25
USP39-216ENST00000490193 SFTPDP35247 375 aa7.23□□□□□ -1.25
USP39-216ENST00000490193 PRIM2P49643 509 aa7.23□□□□□ -1.25
USP39-216ENST00000490193 SERPINB9P50453 376 aa7.23□□□□□ -1.25
USP39-216ENST00000490193 PKNOX1P55347 436 aa7.23□□□□□ -1.25
USP39-216ENST00000490193 SUMO3P55854 103 aaPredicted RBP7.23□□□□□ -1.25
USP39-216ENST00000490193 RAC3P60763 192 aa7.23□□□□□ -1.25
USP39-216ENST00000490193 FOXF1Q12946 379 aa7.23□□□□□ -1.25
USP39-216ENST00000490193 RAB35Q15286 201 aa7.23□□□□□ -1.25
USP39-216ENST00000490193 TRADDQ15628 312 aa7.23□□□□□ -1.25
USP39-216ENST00000490193 CD226Q15762 336 aa7.23□□□□□ -1.25
USP39-216ENST00000490193 STK11Q15831 433 aa7.23□□□□□ -1.25
USP39-216ENST00000490193 ARL13AQ5H913 290 aaPredicted RBP7.23□□□□□ -1.25
USP39-216ENST00000490193 EXOSC6Q5RKV6 272 aaKnown RBP7.23□□□□□ -1.25
USP39-216ENST00000490193 FAM166AQ6J272 317 aa7.23□□□□□ -1.25
USP39-216ENST00000490193 ZNF544Q6NX49 715 aa7.23□□□□□ -1.25
USP39-216ENST00000490193 TMEM108Q6UXF1 575 aa7.23□□□□□ -1.25
USP39-216ENST00000490193 MTERF4Q7Z6M4 381 aaKnown RBP7.23□□□□□ -1.25
USP39-216ENST00000490193 ZAR1Q86SH2 424 aa7.23□□□□□ -1.25
USP39-216ENST00000490193 RELL1Q8IUW5 271 aa7.23□□□□□ -1.25
USP39-216ENST00000490193 MUC15Q8N387 334 aa7.23□□□□□ -1.25
USP39-216ENST00000490193 MMGT1Q8N4V1 131 aa7.23□□□□□ -1.25
USP39-216ENST00000490193 ARIH2OSQ8N7S6 290 aa7.23□□□□□ -1.25
USP39-216ENST00000490193 GATSQ8NAP1 163 aa7.23□□□□□ -1.25
USP39-216ENST00000490193 CEP70Q8NHQ1 597 aa7.23□□□□□ -1.25
USP39-216ENST00000490193 B4GALNT2Q8NHY0 566 aa7.23□□□□□ -1.25
USP39-216ENST00000490193 GPR151Q8TDV0 419 aa7.23□□□□□ -1.25
USP39-216ENST00000490193 ZFP90Q8TF47 636 aa7.23□□□□□ -1.25
USP39-216ENST00000490193 GIMAP5Q96F15 307 aa7.23□□□□□ -1.25
USP39-216ENST00000490193 TMEM237Q96Q45 408 aa7.23□□□□□ -1.25
USP39-216ENST00000490193 CXorf36Q9H7Y0 433 aa7.23□□□□□ -1.25
USP39-216ENST00000490193 ZDHHC18Q9NUE0 388 aa7.23□□□□□ -1.25
USP39-216ENST00000490193 KLHL9Q9P2J3 617 aa7.23□□□□□ -1.25
USP39-216ENST00000490193 PRSS50Q9UI38 385 aa7.23□□□□□ -1.25
USP39-216ENST00000490193 KCNS2Q9ULS6 477 aa7.23□□□□□ -1.25
USP39-216ENST00000490193 GPC6Q9Y625 555 aaPredicted RBP7.23□□□□□ -1.25
USP39-216ENST00000490193 MEGF8Q7Z7M0 2845 aa7.23□□□□□ -1.25
USP39-216ENST00000490193 SLC35F4A4IF30 521 aa7.22□□□□□ -1.25
USP39-216ENST00000490193 CCDC151A5D8V7 595 aa7.22□□□□□ -1.25
USP39-216ENST00000490193 ZNF724A8MTY0 619 aa7.22□□□□□ -1.25
USP39-216ENST00000490193 VWC2LB2RUY7 222 aa7.22□□□□□ -1.25
USP39-216ENST00000490193 NDUFS8O00217 210 aa7.22□□□□□ -1.25
USP39-216ENST00000490193 ETV2O00321 342 aaPredicted RBP7.22□□□□□ -1.25
USP39-216ENST00000490193 SCDO00767 359 aa7.22□□□□□ -1.25
USP39-216ENST00000490193 ZNF195O14628 629 aa7.22□□□□□ -1.25
USP39-216ENST00000490193 CYTIPO60759 359 aa7.22□□□□□ -1.25
USP39-216ENST00000490193 INHBAP08476 426 aa7.22□□□□□ -1.25
USP39-216ENST00000490193 DHRS4L1P0CG22 281 aa7.22□□□□□ -1.25
USP39-216ENST00000490193 ACP2P11117 423 aa7.22□□□□□ -1.25
USP39-216ENST00000490193 HPGDP15428 266 aa7.22□□□□□ -1.25
USP39-216ENST00000490193 GGT1P19440 569 aa7.22□□□□□ -1.25
USP39-216ENST00000490193 IMPDH1P20839 514 aa7.22□□□□□ -1.25
USP39-216ENST00000490193 PTNP21246 168 aa7.22□□□□□ -1.25
USP39-216ENST00000490193 ENPP1P22413 925 aa7.22□□□□□ -1.25
USP39-216ENST00000490193 IGHV1-2P23083 117 aa7.22□□□□□ -1.25
USP39-216ENST00000490193 EDNRAP25101 427 aa7.22□□□□□ -1.25
USP39-216ENST00000490193 FRKP42685 505 aaPredicted RBP7.22□□□□□ -1.25
USP39-216ENST00000490193 SERPINB4P48594 390 aa7.22□□□□□ -1.25
USP39-216ENST00000490193 EFNA4P52798 201 aa7.22□□□□□ -1.25
USP39-216ENST00000490193 ZNF117Q03924 483 aa7.22□□□□□ -1.25
USP39-216ENST00000490193 C2orf54Q08AI8 447 aa7.22□□□□□ -1.25
USP39-216ENST00000490193 LCP2Q13094 533 aa7.22□□□□□ -1.25
USP39-216ENST00000490193 SELENBP1Q13228 472 aa7.22□□□□□ -1.25
USP39-216ENST00000490193 DUSP5Q16690 384 aa7.22□□□□□ -1.25
USP39-216ENST00000490193 SLC25A53Q5H9E4 307 aa7.22□□□□□ -1.25
USP39-216ENST00000490193 FAM120AOSQ5T036 256 aa7.22□□□□□ -1.25
USP39-216ENST00000490193 UBAP2Q5T6F2 1119 aaKnown RBP7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms