RNA–Protein interactions for RNA: ENST00000489414.5

EXOSC3-206, Transcript of exosome component 3, humanhuman

TSL 4

Gene EXOSC3, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-206ENST00000489414 XIAPP98170 497 aa6.51□□□□□ -1.37
EXOSC3-206ENST00000489414 CLCQ05315 142 aa6.51□□□□□ -1.37
EXOSC3-206ENST00000489414 BTKQ06187 659 aa6.51□□□□□ -1.37
EXOSC3-206ENST00000489414 LCP2Q13094 533 aa6.51□□□□□ -1.37
EXOSC3-206ENST00000489414 RPS6KA2Q15349 733 aa6.51□□□□□ -1.37
EXOSC3-206ENST00000489414 OR4D1Q15615 310 aa6.51□□□□□ -1.37
EXOSC3-206ENST00000489414 TSNQ15631 228 aaKnown RBP6.51□□□□□ -1.37
EXOSC3-206ENST00000489414 MMEL1Q495T6 779 aa6.51□□□□□ -1.37
EXOSC3-206ENST00000489414 UNC50Q53HI1 259 aa6.51□□□□□ -1.37
EXOSC3-206ENST00000489414 CTSL3PQ5NE16 218 aa6.51□□□□□ -1.37
EXOSC3-206ENST00000489414 PPP4R4Q6NUP7 873 aa6.51□□□□□ -1.37
EXOSC3-206ENST00000489414 SLC22A25Q6T423 547 aa6.51□□□□□ -1.37
EXOSC3-206ENST00000489414 RNF144BQ7Z419 303 aa6.51□□□□□ -1.37
EXOSC3-206ENST00000489414 SNX32Q86XE0 403 aa6.51□□□□□ -1.37
EXOSC3-206ENST00000489414 DDIASQ8IXT1 998 aa6.51□□□□□ -1.37
EXOSC3-206ENST00000489414 Q8N3U1 123 aa6.51□□□□□ -1.37
EXOSC3-206ENST00000489414 CAMKVQ8NCB2 501 aa6.51□□□□□ -1.37
EXOSC3-206ENST00000489414 PPFIBP2Q8ND30 876 aa6.51□□□□□ -1.37
EXOSC3-206ENST00000489414 CD200R1Q8TD46 325 aa6.51□□□□□ -1.37
EXOSC3-206ENST00000489414 ADAMTS16Q8TE57 1224 aa6.51□□□□□ -1.37
EXOSC3-206ENST00000489414 EEF1AKMT1Q8WVE0 214 aa6.51□□□□□ -1.37
EXOSC3-206ENST00000489414 JADE3Q92613 823 aa6.51□□□□□ -1.37
EXOSC3-206ENST00000489414 FAM136AQ96C01 138 aa6.51□□□□□ -1.37
EXOSC3-206ENST00000489414 PDLIM5Q96HC4 596 aaKnown RBP6.51□□□□□ -1.37
EXOSC3-206ENST00000489414 BIRC8Q96P09 236 aa6.51□□□□□ -1.37
EXOSC3-206ENST00000489414 COPS8Q99627 209 aa6.51□□□□□ -1.37
EXOSC3-206ENST00000489414 CCT7Q99832 543 aa6.51□□□□□ -1.37
EXOSC3-206ENST00000489414 MACROD1Q9BQ69 325 aa6.51□□□□□ -1.37
EXOSC3-206ENST00000489414 SLC30A2Q9BRI3 323 aa6.51□□□□□ -1.37
EXOSC3-206ENST00000489414 RACGAP1Q9H0H5 632 aa6.51□□□□□ -1.37
EXOSC3-206ENST00000489414 P2RY12Q9H244 342 aa6.51□□□□□ -1.37
EXOSC3-206ENST00000489414 EFCAB1Q9HAE3 211 aa6.51□□□□□ -1.37
EXOSC3-206ENST00000489414 ZBTB26Q9HCK0 441 aa6.51□□□□□ -1.37
EXOSC3-206ENST00000489414 MRPS30Q9NP92 439 aaKnown RBP6.51□□□□□ -1.37
EXOSC3-206ENST00000489414 PNO1Q9NRX1 252 aaKnown RBP6.51□□□□□ -1.37
EXOSC3-206ENST00000489414 ZDHHC3Q9NYG2 299 aa6.51□□□□□ -1.37
EXOSC3-206ENST00000489414 NPAP1Q9NZP6 1156 aa6.51□□□□□ -1.37
EXOSC3-206ENST00000489414 ANGPTL3Q9Y5C1 460 aa6.51□□□□□ -1.37
EXOSC3-206ENST00000489414 TRBV5-4A0A0C4DH59 114 aa6.5□□□□□ -1.37
EXOSC3-206ENST00000489414 NCF1BA6NI72 391 aaPredicted RBP6.5□□□□□ -1.37
EXOSC3-206ENST00000489414 NCF1CA8MVU1 366 aaPredicted RBP6.5□□□□□ -1.37
EXOSC3-206ENST00000489414 E9PQ18 207 aa6.5□□□□□ -1.37
EXOSC3-206ENST00000489414 PSMD12O00232 456 aaPredicted RBP6.5□□□□□ -1.37
EXOSC3-206ENST00000489414 AIM2O14862 343 aa6.5□□□□□ -1.37
EXOSC3-206ENST00000489414 HAT1O14929 419 aa6.5□□□□□ -1.37
EXOSC3-206ENST00000489414 CHST10O43529 356 aa6.5□□□□□ -1.37
EXOSC3-206ENST00000489414 RGS14O43566 566 aa6.5□□□□□ -1.37
EXOSC3-206ENST00000489414 SNX4O95219 450 aa6.5□□□□□ -1.37
EXOSC3-206ENST00000489414 RPN2P04844 631 aa6.5□□□□□ -1.37
EXOSC3-206ENST00000489414 SFTPBP07988 381 aa6.5□□□□□ -1.37
EXOSC3-206ENST00000489414 ENO3P13929 434 aaPredicted RBP6.5□□□□□ -1.37
EXOSC3-206ENST00000489414 NCF1P14598 390 aaPredicted RBP6.5□□□□□ -1.37
EXOSC3-206ENST00000489414 IFNGR1P15260 489 aa6.5□□□□□ -1.37
EXOSC3-206ENST00000489414 IL11P20809 199 aa6.5□□□□□ -1.37
EXOSC3-206ENST00000489414 NTF4P34130 210 aa6.5□□□□□ -1.37
EXOSC3-206ENST00000489414 PIK3CGP48736 1102 aa6.5□□□□□ -1.37
EXOSC3-206ENST00000489414 NUDT2P50583 147 aa6.5□□□□□ -1.37
EXOSC3-206ENST00000489414 ATP4BP51164 291 aa6.5□□□□□ -1.37
EXOSC3-206ENST00000489414 PKNOX1P55347 436 aa6.5□□□□□ -1.37
EXOSC3-206ENST00000489414 TIAL1Q01085 375 aaKnown RBP eCLIP6.5□□□□□ -1.37
EXOSC3-206ENST00000489414 DCTN2Q13561 401 aaKnown RBP6.5□□□□□ -1.37
EXOSC3-206ENST00000489414 KPNB1Q14974 876 aaKnown RBP6.5□□□□□ -1.37
EXOSC3-206ENST00000489414 ZNF628Q5EBL2 1059 aa6.5□□□□□ -1.37
EXOSC3-206ENST00000489414 BICRALQ6AI39 1079 aa6.5□□□□□ -1.37
EXOSC3-206ENST00000489414 METTL2BQ6P1Q9 378 aaKnown RBP6.5□□□□□ -1.37
EXOSC3-206ENST00000489414 PGBD2Q6P3X8 592 aa6.5□□□□□ -1.37
EXOSC3-206ENST00000489414 GPRIN3Q6ZVF9 776 aa6.5□□□□□ -1.37
EXOSC3-206ENST00000489414 SATL1Q86VE3 508 aa6.5□□□□□ -1.37
EXOSC3-206ENST00000489414 PLD3Q8IV08 490 aa6.5□□□□□ -1.37
EXOSC3-206ENST00000489414 CPNE9Q8IYJ1 553 aa6.5□□□□□ -1.37
EXOSC3-206ENST00000489414 DND1Q8IYX4 353 aaKnown RBP6.5□□□□□ -1.37
EXOSC3-206ENST00000489414 DEFB107AQ8IZN7 70 aa6.5□□□□□ -1.37
EXOSC3-206ENST00000489414 ZNF786Q8N393 782 aa6.5□□□□□ -1.37
EXOSC3-206ENST00000489414 CLDN19Q8N6F1 224 aa6.5□□□□□ -1.37
EXOSC3-206ENST00000489414 TRPC4APQ8TEL6 797 aa6.5□□□□□ -1.37
EXOSC3-206ENST00000489414 ATP6V1E2Q96A05 226 aa6.5□□□□□ -1.37
EXOSC3-206ENST00000489414 RSRC1Q96IZ7 334 aaKnown RBP6.5□□□□□ -1.37
EXOSC3-206ENST00000489414 MAELQ96JY0 434 aaKnown RBP6.5□□□□□ -1.37
EXOSC3-206ENST00000489414 EGFL8Q99944 293 aa6.5□□□□□ -1.37
EXOSC3-206ENST00000489414 INPP5KQ9BT40 448 aa6.5□□□□□ -1.37
EXOSC3-206ENST00000489414 ACAT2Q9BWD1 397 aa6.5□□□□□ -1.37
EXOSC3-206ENST00000489414 C1QTNF3Q9BXJ4 246 aa6.5□□□□□ -1.37
EXOSC3-206ENST00000489414 MRPL1Q9BYD6 325 aaKnown RBP6.5□□□□□ -1.37
EXOSC3-206ENST00000489414 ALOXE3Q9BYJ1 711 aa6.5□□□□□ -1.37
EXOSC3-206ENST00000489414 VCX3BQ9H321 246 aa6.5□□□□□ -1.37
EXOSC3-206ENST00000489414 PLEK2Q9NYT0 353 aa6.5□□□□□ -1.37
EXOSC3-206ENST00000489414 KLHL42Q9P2K6 505 aa6.5□□□□□ -1.37
EXOSC3-206ENST00000489414 UTS2RQ9UKP6 389 aa6.5□□□□□ -1.37
EXOSC3-206ENST00000489414 NUP50Q9UKX7 468 aa6.5□□□□□ -1.37
EXOSC3-206ENST00000489414 MGAT4BQ9UQ53 548 aa6.5□□□□□ -1.37
EXOSC3-206ENST00000489414 CLDN16Q9Y5I7 305 aa6.5□□□□□ -1.37
EXOSC3-206ENST00000489414 HEATR1Q9H583 2144 aaKnown RBP6.49□□□□□ -1.37
EXOSC3-206ENST00000489414 BBIP1A8MTZ0 92 aa6.49□□□□□ -1.37
EXOSC3-206ENST00000489414 TMEM233B4DJY2 109 aa6.49□□□□□ -1.37
EXOSC3-206ENST00000489414 CCNT2O60583 730 aaKnown RBP6.49□□□□□ -1.37
EXOSC3-206ENST00000489414 PEX11AO75192 247 aa6.49□□□□□ -1.37
EXOSC3-206ENST00000489414 ENTPD5O75356 428 aa6.49□□□□□ -1.37
EXOSC3-206ENST00000489414 PSMG1O95456 288 aa6.49□□□□□ -1.37
EXOSC3-206ENST00000489414 ANP32DO95626 131 aa6.49□□□□□ -1.37
EXOSC3-206ENST00000489414 OTCP00480 354 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms