RNA–Protein interactions for RNA: ENST00000487747.5

SMC4-219, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-219ENST00000487747 A0A0G2JRQ6 117 aa1.85□□□□□ -2.11
SMC4-219ENST00000487747 TIMM44O43615 452 aa1.85□□□□□ -2.11
SMC4-219ENST00000487747 RBBP9O75884 186 aa1.85□□□□□ -2.11
SMC4-219ENST00000487747 KIAA0754O94854 1291 aa1.85□□□□□ -2.11
SMC4-219ENST00000487747 SLC6A8P48029 635 aa1.85□□□□□ -2.11
SMC4-219ENST00000487747 SH3BGRP55822 239 aaPredicted RBP1.85□□□□□ -2.11
SMC4-219ENST00000487747 KIAA1024LP59773 190 aa1.85□□□□□ -2.11
SMC4-219ENST00000487747 ARFRP1Q13795 201 aa1.85□□□□□ -2.11
SMC4-219ENST00000487747 TFDP1Q14186 410 aa1.85□□□□□ -2.11
SMC4-219ENST00000487747 HFEQ30201 348 aa1.85□□□□□ -2.11
SMC4-219ENST00000487747 Q6ZR03 302 aa1.85□□□□□ -2.11
SMC4-219ENST00000487747 ZNF410Q86VK4 478 aa1.85□□□□□ -2.11
SMC4-219ENST00000487747 MMAAQ8IVH4 418 aaKnown RBP1.85□□□□□ -2.11
SMC4-219ENST00000487747 MYOCDQ8IZQ8 938 aa1.85□□□□□ -2.11
SMC4-219ENST00000487747 C6orf223Q8N319 242 aa1.85□□□□□ -2.11
SMC4-219ENST00000487747 SFRP1Q8N474 314 aa1.85□□□□□ -2.11
SMC4-219ENST00000487747 ST7LQ8TDW4 575 aa1.85□□□□□ -2.11
SMC4-219ENST00000487747 DTD2Q96FN9 168 aa1.85□□□□□ -2.11
SMC4-219ENST00000487747 NRIP2Q9BQI9 281 aa1.85□□□□□ -2.11
SMC4-219ENST00000487747 RIOK1Q9BRS2 568 aaKnown RBP1.85□□□□□ -2.11
SMC4-219ENST00000487747 TBC1D10AQ9BXI6 508 aa1.85□□□□□ -2.11
SMC4-219ENST00000487747 MMADHCQ9H3L0 296 aaPredicted RBP1.85□□□□□ -2.11
SMC4-219ENST00000487747 GPN2Q9H9Y4 310 aaPredicted RBP1.85□□□□□ -2.11
SMC4-219ENST00000487747 EML4Q9HC35 981 aaKnown RBP1.85□□□□□ -2.11
SMC4-219ENST00000487747 LHX9Q9NQ69 397 aa1.85□□□□□ -2.11
SMC4-219ENST00000487747 AIG1Q9NVV5 245 aa1.85□□□□□ -2.11
SMC4-219ENST00000487747 GALPQ9UBC7 116 aa1.85□□□□□ -2.11
SMC4-219ENST00000487747 NUP214P35658 2090 aaPredicted RBP1.85□□□□□ -2.11
SMC4-219ENST00000487747 PPIAL4EA0A075B759 164 aa1.84□□□□□ -2.11
SMC4-219ENST00000487747 PPIAL4CA0A0B4J2A2 164 aa1.84□□□□□ -2.11
SMC4-219ENST00000487747 ZNF233A6NK53 670 aa1.84□□□□□ -2.11
SMC4-219ENST00000487747 PPIAL4DF5H284 164 aa1.84□□□□□ -2.11
SMC4-219ENST00000487747 B4GALT2O60909 372 aa1.84□□□□□ -2.11
SMC4-219ENST00000487747 SPAG7O75391 227 aa1.84□□□□□ -2.11
SMC4-219ENST00000487747 DCNP07585 359 aaKnown RBP1.84□□□□□ -2.11
SMC4-219ENST00000487747 PPIAL4FP0DN26 164 aa1.84□□□□□ -2.11
SMC4-219ENST00000487747 RNASE2P10153 161 aaKnown RBP1.84□□□□□ -2.11
SMC4-219ENST00000487747 TSPAN8P19075 237 aa1.84□□□□□ -2.11
SMC4-219ENST00000487747 EPHX2P34913 555 aa1.84□□□□□ -2.11
SMC4-219ENST00000487747 ATXN7L3Q14CW9 347 aaPredicted RBP1.84□□□□□ -2.11
SMC4-219ENST00000487747 PSG5Q15238 335 aa1.84□□□□□ -2.11
SMC4-219ENST00000487747 IL23RQ5VWK5 629 aa1.84□□□□□ -2.11
SMC4-219ENST00000487747 OR8G2PQ6IF36 304 aa1.84□□□□□ -2.11
SMC4-219ENST00000487747 DLEU7Q6UYE1 221 aa1.84□□□□□ -2.11
SMC4-219ENST00000487747 LRP11Q86VZ4 500 aa1.84□□□□□ -2.11
SMC4-219ENST00000487747 C12orf56Q8IXR9 622 aa1.84□□□□□ -2.11
SMC4-219ENST00000487747 UBALD1Q8TB05 177 aa1.84□□□□□ -2.11
SMC4-219ENST00000487747 GDAP1Q8TB36 358 aa1.84□□□□□ -2.11
SMC4-219ENST00000487747 SLC25A36Q96CQ1 311 aa1.84□□□□□ -2.11
SMC4-219ENST00000487747 CYP2S1Q96SQ9 504 aa1.84□□□□□ -2.11
SMC4-219ENST00000487747 ADPGKQ9BRR6 497 aa1.84□□□□□ -2.11
SMC4-219ENST00000487747 PPDPFQ9H3Y8 114 aa1.84□□□□□ -2.11
SMC4-219ENST00000487747 ANGPTL2Q9UKU9 493 aa1.84□□□□□ -2.11
SMC4-219ENST00000487747 FCGBPQ9Y6R7 5405 aaPredicted RBP1.84□□□□□ -2.12
SMC4-219ENST00000487747 LAD1O00515 517 aa1.83□□□□□ -2.12
SMC4-219ENST00000487747 ADAM12O43184 909 aa1.83□□□□□ -2.12
SMC4-219ENST00000487747 ZBTB14O43829 449 aa1.83□□□□□ -2.12
SMC4-219ENST00000487747 GCFC2P16383 781 aaKnown RBP1.83□□□□□ -2.12
SMC4-219ENST00000487747 CRISP2P16562 243 aa1.83□□□□□ -2.12
SMC4-219ENST00000487747 UQCRC2P22695 453 aa1.83□□□□□ -2.12
SMC4-219ENST00000487747 ACTA2P62736 377 aa1.83□□□□□ -2.12
SMC4-219ENST00000487747 ACTC1P68032 377 aa1.83□□□□□ -2.12
SMC4-219ENST00000487747 SLMAPQ14BN4 828 aa1.83□□□□□ -2.12
SMC4-219ENST00000487747 PIGGQ5H8A4 983 aa1.83□□□□□ -2.12
SMC4-219ENST00000487747 UNC45BQ8IWX7 931 aa1.83□□□□□ -2.12
SMC4-219ENST00000487747 OR6X1Q8NH79 312 aa1.83□□□□□ -2.12
SMC4-219ENST00000487747 IL1F10Q8WWZ1 152 aa1.83□□□□□ -2.12
SMC4-219ENST00000487747 FRZBQ92765 325 aa1.83□□□□□ -2.12
SMC4-219ENST00000487747 ATP6V0A1Q93050 837 aa1.83□□□□□ -2.12
SMC4-219ENST00000487747 RMI2Q96E14 147 aa1.83□□□□□ -2.12
SMC4-219ENST00000487747 COMMD4Q9H0A8 199 aa1.83□□□□□ -2.12
SMC4-219ENST00000487747 IL1RAPL2Q9NP60 686 aa1.83□□□□□ -2.12
SMC4-219ENST00000487747 PLLPQ9Y342 182 aa1.83□□□□□ -2.12
SMC4-219ENST00000487747 FBN3Q75N90 2809 aa1.82□□□□□ -2.12
SMC4-219ENST00000487747 HMGB1P1B2RPK0 211 aaPredicted RBP1.82□□□□□ -2.12
SMC4-219ENST00000487747 IGKV1D-16P01601 117 aa1.82□□□□□ -2.12
SMC4-219ENST00000487747 PLEKP08567 350 aaPredicted RBP1.82□□□□□ -2.12
SMC4-219ENST00000487747 HNRNPFP52597 415 aaKnown RBP1.82□□□□□ -2.12
SMC4-219ENST00000487747 WASHC5Q12768 1159 aa1.82□□□□□ -2.12
SMC4-219ENST00000487747 LY6G6FQ5SQ64 297 aa1.82□□□□□ -2.12
SMC4-219ENST00000487747 ARCQ7LC44 396 aa1.82□□□□□ -2.12
SMC4-219ENST00000487747 RALGPS2Q86X27 583 aaPredicted RBP1.82□□□□□ -2.12
SMC4-219ENST00000487747 NEK11Q8NG66 645 aa1.82□□□□□ -2.12
SMC4-219ENST00000487747 ELMO2Q96JJ3 720 aa1.82□□□□□ -2.12
SMC4-219ENST00000487747 TEX13AQ9BXU3 409 aaPredicted RBP1.82□□□□□ -2.12
SMC4-219ENST00000487747 SIRPDQ9H106 197 aa1.82□□□□□ -2.12
SMC4-219ENST00000487747 POLR3FQ9H1D9 316 aaPredicted RBP1.82□□□□□ -2.12
SMC4-219ENST00000487747 SLC25A22Q9H936 323 aa1.82□□□□□ -2.12
SMC4-219ENST00000487747 NUFIP1Q9UHK0 495 aaKnown RBP1.82□□□□□ -2.12
SMC4-219ENST00000487747 TEX264Q9Y6I9 313 aa1.82□□□□□ -2.12
SMC4-219ENST00000487747 PIKFYVEQ9Y2I7 2098 aa1.81□□□□□ -2.12
SMC4-219ENST00000487747 A0A0G2JLM5 398 aa1.81□□□□□ -2.12
SMC4-219ENST00000487747 FCN1O00602 326 aa1.81□□□□□ -2.12
SMC4-219ENST00000487747 RHOXF2BP0C7M4 288 aa1.81□□□□□ -2.12
SMC4-219ENST00000487747 BCKDHAP12694 445 aa1.81□□□□□ -2.12
SMC4-219ENST00000487747 GLULP15104 373 aa1.81□□□□□ -2.12
SMC4-219ENST00000487747 HNF1AP20823 631 aa1.81□□□□□ -2.12
SMC4-219ENST00000487747 EFNB2P52799 333 aa1.81□□□□□ -2.12
SMC4-219ENST00000487747 SSTP61278 116 aa1.81□□□□□ -2.12
SMC4-219ENST00000487747 PPP1R8Q12972 351 aaKnown RBP1.81□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms