RNA–Protein interactions for RNA: ENST00000486210.1

MCF2L-226, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 548 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-226ENST00000486210 SLC25A3Q00325 362 aa15.97■□□□□ 0.15
MCF2L-226ENST00000486210 KEAP1Q14145 624 aa15.97■□□□□ 0.15
MCF2L-226ENST00000486210 SF3B4Q15427 424 aaKnown RBP eCLIP15.97■□□□□ 0.15
MCF2L-226ENST00000486210 HSPB2Q16082 182 aa15.97■□□□□ 0.15
MCF2L-226ENST00000486210 SYPL1Q16563 259 aa15.97■□□□□ 0.15
MCF2L-226ENST00000486210 DECR1Q16698 335 aa15.97■□□□□ 0.15
MCF2L-226ENST00000486210 FBXL19-AS1Q494R0 122 aa15.97■□□□□ 0.15
MCF2L-226ENST00000486210 TNIP2Q8NFZ5 429 aa15.97■□□□□ 0.15
MCF2L-226ENST00000486210 OR8J3Q8NGG0 315 aa15.97■□□□□ 0.15
MCF2L-226ENST00000486210 NEIL3Q8TAT5 605 aa15.97■□□□□ 0.15
MCF2L-226ENST00000486210 MAL2Q969L2 176 aa15.97■□□□□ 0.15
MCF2L-226ENST00000486210 NODALQ96S42 347 aa15.97■□□□□ 0.15
MCF2L-226ENST00000486210 SDF2Q99470 211 aa15.97■□□□□ 0.15
MCF2L-226ENST00000486210 SLC6A15Q9H2J7 730 aa15.97■□□□□ 0.15
MCF2L-226ENST00000486210 RAD21L1Q9H4I0 556 aa15.97■□□□□ 0.15
MCF2L-226ENST00000486210 KAT8Q9H7Z6 458 aaKnown RBP15.97■□□□□ 0.15
MCF2L-226ENST00000486210 GMPR2Q9P2T1 348 aaKnown RBP15.97■□□□□ 0.15
MCF2L-226ENST00000486210 CNOT11Q9UKZ1 510 aaKnown RBP15.97■□□□□ 0.15
MCF2L-226ENST00000486210 CHCHD2Q9Y6H1 151 aaPredicted RBP15.97■□□□□ 0.15
MCF2L-226ENST00000486210 NINQ8N4C6 2090 aa15.96■□□□□ 0.15
MCF2L-226ENST00000486210 KIAA1324LA8MWY0 1029 aaPredicted RBP15.96■□□□□ 0.15
MCF2L-226ENST00000486210 TRAPPC6AO75865 159 aa15.96■□□□□ 0.15
MCF2L-226ENST00000486210 BMP2P12643 396 aa15.96■□□□□ 0.15
MCF2L-226ENST00000486210 CALB2P22676 271 aa15.96■□□□□ 0.15
MCF2L-226ENST00000486210 IL12BP29460 328 aa15.96■□□□□ 0.15
MCF2L-226ENST00000486210 PSME3P61289 254 aa15.96■□□□□ 0.15
MCF2L-226ENST00000486210 FADDQ13158 208 aa15.96■□□□□ 0.15
MCF2L-226ENST00000486210 ARHGAP11BQ3KRB8 267 aa15.96■□□□□ 0.15
MCF2L-226ENST00000486210 CLEC9AQ6UXN8 241 aa15.96■□□□□ 0.15
MCF2L-226ENST00000486210 RINLQ6ZS11 566 aa15.96■□□□□ 0.15
MCF2L-226ENST00000486210 SLC15A3Q8IY34 581 aa15.96■□□□□ 0.15
MCF2L-226ENST00000486210 OR10A6Q8NH74 314 aa15.96■□□□□ 0.15
MCF2L-226ENST00000486210 COL21A1Q96P44 957 aa15.96■□□□□ 0.15
MCF2L-226ENST00000486210 PIF1Q9H611 641 aa15.96■□□□□ 0.15
MCF2L-226ENST00000486210 PROK2Q9HC23 129 aa15.96■□□□□ 0.15
MCF2L-226ENST00000486210 EXD2Q9NVH0 621 aa15.96■□□□□ 0.15
MCF2L-226ENST00000486210 USP22Q9UPT9 525 aa15.96■□□□□ 0.15
MCF2L-226ENST00000486210 NPIPA5A0A0B4J1W7 369 aa15.95■□□□□ 0.14
MCF2L-226ENST00000486210 ANKRD33BA6NCL7 494 aa15.95■□□□□ 0.14
MCF2L-226ENST00000486210 OR6C70A6NIJ9 312 aa15.95■□□□□ 0.14
MCF2L-226ENST00000486210 LRRC3CA6NJW4 275 aa15.95■□□□□ 0.14
MCF2L-226ENST00000486210 AHRRA9YTQ3 701 aa15.95■□□□□ 0.14
MCF2L-226ENST00000486210 B2RBV5 119 aa15.95■□□□□ 0.14
MCF2L-226ENST00000486210 NPIPA7E9PJI5 369 aa15.95■□□□□ 0.14
MCF2L-226ENST00000486210 DVL2O14641 736 aa15.95■□□□□ 0.14
MCF2L-226ENST00000486210 FCMRO60667 390 aa15.95■□□□□ 0.14
MCF2L-226ENST00000486210 SNX4O95219 450 aa15.95■□□□□ 0.14
MCF2L-226ENST00000486210 AGR2O95994 175 aa15.95■□□□□ 0.14
MCF2L-226ENST00000486210 HEXAP06865 529 aa15.95■□□□□ 0.14
MCF2L-226ENST00000486210 CHRM4P08173 479 aa15.95■□□□□ 0.14
MCF2L-226ENST00000486210 TFPTP0C1Z6 253 aa15.95■□□□□ 0.14
MCF2L-226ENST00000486210 NPIPA8P0DM63 369 aa15.95■□□□□ 0.14
MCF2L-226ENST00000486210 CEACAM8P31997 349 aaPredicted RBP15.95■□□□□ 0.14
MCF2L-226ENST00000486210 GCKP35557 465 aa15.95■□□□□ 0.14
MCF2L-226ENST00000486210 KRT20P35900 424 aa15.95■□□□□ 0.14
MCF2L-226ENST00000486210 CPOXP36551 454 aa15.95■□□□□ 0.14
MCF2L-226ENST00000486210 MAGEA8P43361 318 aa15.95■□□□□ 0.14
MCF2L-226ENST00000486210 ANXA11P50995 505 aaKnown RBP15.95■□□□□ 0.14
MCF2L-226ENST00000486210 SLC7A2P52569 658 aa15.95■□□□□ 0.14
MCF2L-226ENST00000486210 PNLIPRP2P54317 469 aa15.95■□□□□ 0.14
MCF2L-226ENST00000486210 PSPHP78330 225 aa15.95■□□□□ 0.14
MCF2L-226ENST00000486210 TXNL4AP83876 142 aaKnown RBP15.95■□□□□ 0.14
MCF2L-226ENST00000486210 ADRM1Q16186 407 aa15.95■□□□□ 0.14
MCF2L-226ENST00000486210 CPEB4Q17RY0 729 aaKnown RBP eCLIP15.95■□□□□ 0.14
MCF2L-226ENST00000486210 GCNT6Q5T4J0 391 aa15.95■□□□□ 0.14
MCF2L-226ENST00000486210 ATAD3BQ5T9A4 648 aa15.95■□□□□ 0.14
MCF2L-226ENST00000486210 BICRALQ6AI39 1079 aa15.95■□□□□ 0.14
MCF2L-226ENST00000486210 NUP54Q7Z3B4 507 aa15.95■□□□□ 0.14
MCF2L-226ENST00000486210 C16orf62Q7Z3J2 963 aa15.95■□□□□ 0.14
MCF2L-226ENST00000486210 PACS2Q86VP3 889 aa15.95■□□□□ 0.14
MCF2L-226ENST00000486210 PTOV1Q86YD1 416 aa15.95■□□□□ 0.14
MCF2L-226ENST00000486210 PM20D2Q8IYS1 436 aa15.95■□□□□ 0.14
MCF2L-226ENST00000486210 SPPL2AQ8TCT8 520 aa15.95■□□□□ 0.14
MCF2L-226ENST00000486210 SECISBP2Q96T21 854 aaKnown RBP15.95■□□□□ 0.14
MCF2L-226ENST00000486210 HOPXQ9BPY8 73 aaPredicted RBP15.95■□□□□ 0.14
MCF2L-226ENST00000486210 CORO2BQ9UQ03 480 aa15.95■□□□□ 0.14
MCF2L-226ENST00000486210 A0A1W2PPR1 153 aa15.94■□□□□ 0.14
MCF2L-226ENST00000486210 NME4O00746 187 aa15.94■□□□□ 0.14
MCF2L-226ENST00000486210 ICOSLGO75144 302 aa15.94■□□□□ 0.14
MCF2L-226ENST00000486210 SOX30O94993 753 aa15.94■□□□□ 0.14
MCF2L-226ENST00000486210 UTS2O95399 124 aa15.94■□□□□ 0.14
MCF2L-226ENST00000486210 AK1P00568 194 aa15.94■□□□□ 0.14
MCF2L-226ENST00000486210 BCHEP06276 602 aa15.94■□□□□ 0.14
MCF2L-226ENST00000486210 ARAFP10398 606 aa15.94■□□□□ 0.14
MCF2L-226ENST00000486210 NR2F1P10589 423 aa15.94■□□□□ 0.14
MCF2L-226ENST00000486210 EPXP11678 715 aa15.94■□□□□ 0.14
MCF2L-226ENST00000486210 TOMM20Q15388 145 aa15.94■□□□□ 0.14
MCF2L-226ENST00000486210 GRAMD1BQ3KR37 738 aa15.94■□□□□ 0.14
MCF2L-226ENST00000486210 GPAT3Q53EU6 434 aa15.94■□□□□ 0.14
MCF2L-226ENST00000486210 RPS26P11Q5JNZ5 115 aaPredicted RBP15.94■□□□□ 0.14
MCF2L-226ENST00000486210 NET1Q7Z628 596 aaPredicted RBP15.94■□□□□ 0.14
MCF2L-226ENST00000486210 CALHM3Q86XJ0 350 aa15.94■□□□□ 0.14
MCF2L-226ENST00000486210 RBM15BQ8NDT2 890 aaKnown RBP15.94■□□□□ 0.14
MCF2L-226ENST00000486210 LINC01560Q8TB33 94 aa15.94■□□□□ 0.14
MCF2L-226ENST00000486210 SLC38A5Q8WUX1 472 aa15.94■□□□□ 0.14
MCF2L-226ENST00000486210 TMEM19Q96HH6 336 aa15.94■□□□□ 0.14
MCF2L-226ENST00000486210 ZNF583Q96ND8 569 aa15.94■□□□□ 0.14
MCF2L-226ENST00000486210 SH3GL1Q99961 368 aa15.94■□□□□ 0.14
MCF2L-226ENST00000486210 ZNF350Q9GZX5 532 aa15.94■□□□□ 0.14
MCF2L-226ENST00000486210 A4GALTQ9NPC4 353 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms