RNA–Protein interactions for RNA: ENST00000485618.1

SF3A1-208, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 593 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-208ENST00000485618 CMPK2Q5EBM0 449 aa7.52□□□□□ -1.21
SF3A1-208ENST00000485618 NHSL2Q5HYW2 709 aa7.52□□□□□ -1.21
SF3A1-208ENST00000485618 RNFT1Q5M7Z0 435 aa7.52□□□□□ -1.21
SF3A1-208ENST00000485618 RAET1LQ5VY80 246 aa7.52□□□□□ -1.21
SF3A1-208ENST00000485618 TMEM211Q6ICI0 200 aa7.52□□□□□ -1.21
SF3A1-208ENST00000485618 NET1Q7Z628 596 aaPredicted RBP7.52□□□□□ -1.21
SF3A1-208ENST00000485618 TREML1Q86YW5 311 aa7.52□□□□□ -1.21
SF3A1-208ENST00000485618 SPPL2CQ8IUH8 684 aa7.52□□□□□ -1.21
SF3A1-208ENST00000485618 MSRB3Q8IXL7 192 aa7.52□□□□□ -1.21
SF3A1-208ENST00000485618 MEIOBQ8N635 442 aa7.52□□□□□ -1.21
SF3A1-208ENST00000485618 FITM2Q8N6M3 262 aa7.52□□□□□ -1.21
SF3A1-208ENST00000485618 GATSQ8NAP1 163 aa7.52□□□□□ -1.21
SF3A1-208ENST00000485618 FAM83FQ8NEG4 500 aaPredicted RBP7.52□□□□□ -1.21
SF3A1-208ENST00000485618 OR2M3Q8NG83 312 aa7.52□□□□□ -1.21
SF3A1-208ENST00000485618 NFKBIDQ8NI38 313 aa7.52□□□□□ -1.21
SF3A1-208ENST00000485618 ZNF563Q8TA94 476 aa7.52□□□□□ -1.21
SF3A1-208ENST00000485618 ST8SIA1Q92185 356 aa7.52□□□□□ -1.21
SF3A1-208ENST00000485618 ABTB1Q969K4 478 aaPredicted RBP7.52□□□□□ -1.21
SF3A1-208ENST00000485618 MAL2Q969L2 176 aa7.52□□□□□ -1.21
SF3A1-208ENST00000485618 NTNG2Q96CW9 530 aa7.52□□□□□ -1.21
SF3A1-208ENST00000485618 ARSGQ96EG1 525 aa7.52□□□□□ -1.21
SF3A1-208ENST00000485618 SH3YL1Q96HL8 342 aaPredicted RBP7.52□□□□□ -1.21
SF3A1-208ENST00000485618 SFXN2Q96NB2 322 aa7.52□□□□□ -1.21
SF3A1-208ENST00000485618 KCTD14Q9BQ13 255 aaPredicted RBP7.52□□□□□ -1.21
SF3A1-208ENST00000485618 TSPAN10Q9H1Z9 355 aaPredicted RBP7.52□□□□□ -1.21
SF3A1-208ENST00000485618 SLC38A1Q9H2H9 487 aa7.52□□□□□ -1.21
SF3A1-208ENST00000485618 UBQLN3Q9H347 655 aa7.52□□□□□ -1.21
SF3A1-208ENST00000485618 TIGARQ9NQ88 270 aa7.52□□□□□ -1.21
SF3A1-208ENST00000485618 FBXO34Q9NWN3 711 aa7.52□□□□□ -1.21
SF3A1-208ENST00000485618 ADPRHL2Q9NX46 363 aa7.52□□□□□ -1.21
SF3A1-208ENST00000485618 PAQR5Q9NXK6 330 aaPredicted RBP7.52□□□□□ -1.21
SF3A1-208ENST00000485618 BAG5Q9UL15 447 aa7.52□□□□□ -1.21
SF3A1-208ENST00000485618 CARD8Q9Y2G2 431 aa7.52□□□□□ -1.21
SF3A1-208ENST00000485618 NTNG1Q9Y2I2 539 aa7.52□□□□□ -1.21
SF3A1-208ENST00000485618 AP4B1Q9Y6B7 739 aa7.52□□□□□ -1.21
SF3A1-208ENST00000485618 ESPL1Q14674 2120 aa7.52□□□□□ -1.21
SF3A1-208ENST00000485618 POLEQ07864 2286 aa7.52□□□□□ -1.21
SF3A1-208ENST00000485618 A0A1B0GTH9 108 aa7.51□□□□□ -1.21
SF3A1-208ENST00000485618 C7orf72A4D263 438 aa7.51□□□□□ -1.21
SF3A1-208ENST00000485618 CFAP73A6NFT4 308 aa7.51□□□□□ -1.21
SF3A1-208ENST00000485618 CCT8L1PA6NM43 557 aa7.51□□□□□ -1.21
SF3A1-208ENST00000485618 FAM220BPB1ANY3 271 aa7.51□□□□□ -1.21
SF3A1-208ENST00000485618 SLC19A2O60779 497 aa7.51□□□□□ -1.21
SF3A1-208ENST00000485618 WDR1O75083 606 aa7.51□□□□□ -1.21
SF3A1-208ENST00000485618 C8BP07358 591 aa7.51□□□□□ -1.21
SF3A1-208ENST00000485618 RFPL3SP0C7P2 107 aa7.51□□□□□ -1.21
SF3A1-208ENST00000485618 PABPC4LP0CB38 370 aaKnown RBP7.51□□□□□ -1.21
SF3A1-208ENST00000485618 PEPDP12955 493 aa7.51□□□□□ -1.21
SF3A1-208ENST00000485618 POU3F2P20265 443 aaPredicted RBP7.51□□□□□ -1.21
SF3A1-208ENST00000485618 TDGF1P3P51864 188 aa7.51□□□□□ -1.21
SF3A1-208ENST00000485618 RPS3AP61247 264 aaKnown RBP7.51□□□□□ -1.21
SF3A1-208ENST00000485618 NCALDP61601 193 aa7.51□□□□□ -1.21
SF3A1-208ENST00000485618 EEF1A1P68104 462 aaKnown RBP7.51□□□□□ -1.21
SF3A1-208ENST00000485618 LIPEQ05469 1076 aa7.51□□□□□ -1.21
SF3A1-208ENST00000485618 MRPL49Q13405 166 aaKnown RBP7.51□□□□□ -1.21
SF3A1-208ENST00000485618 ADRM1Q16186 407 aa7.51□□□□□ -1.21
SF3A1-208ENST00000485618 RABL3Q5HYI8 236 aa7.51□□□□□ -1.21
SF3A1-208ENST00000485618 RNF220Q5VTB9 566 aa7.51□□□□□ -1.21
SF3A1-208ENST00000485618 EEF1A1P5Q5VTE0 462 aa7.51□□□□□ -1.21
SF3A1-208ENST00000485618 DESI1Q6ICB0 168 aa7.51□□□□□ -1.21
SF3A1-208ENST00000485618 APOOLQ6UXV4 268 aa7.51□□□□□ -1.21
SF3A1-208ENST00000485618 ZAR1Q86SH2 424 aa7.51□□□□□ -1.21
SF3A1-208ENST00000485618 YRDCQ86U90 279 aaKnown RBP7.51□□□□□ -1.21
SF3A1-208ENST00000485618 RANBP3LQ86VV4 465 aaPredicted RBP7.51□□□□□ -1.21
SF3A1-208ENST00000485618 GRAMD2AQ8IUY3 354 aa7.51□□□□□ -1.21
SF3A1-208ENST00000485618 PGAM4Q8N0Y7 254 aa7.51□□□□□ -1.21
SF3A1-208ENST00000485618 PRR7Q8TB68 274 aa7.51□□□□□ -1.21
SF3A1-208ENST00000485618 PROX1Q92786 737 aa7.51□□□□□ -1.21
SF3A1-208ENST00000485618 MRGPRX4Q96LA9 322 aa7.51□□□□□ -1.21
SF3A1-208ENST00000485618 RNF145Q96MT1 663 aa7.51□□□□□ -1.21
SF3A1-208ENST00000485618 ZNF583Q96ND8 569 aa7.51□□□□□ -1.21
SF3A1-208ENST00000485618 GPATCH1Q9BRR8 931 aaKnown RBP7.51□□□□□ -1.21
SF3A1-208ENST00000485618 SLC39A3Q9BRY0 314 aa7.51□□□□□ -1.21
SF3A1-208ENST00000485618 PINK1Q9BXM7 581 aa7.51□□□□□ -1.21
SF3A1-208ENST00000485618 C1orf21Q9H246 121 aa7.51□□□□□ -1.21
SF3A1-208ENST00000485618 TP63Q9H3D4 680 aaPredicted RBP7.51□□□□□ -1.21
SF3A1-208ENST00000485618 PLSCR2Q9NRY7 297 aa7.51□□□□□ -1.21
SF3A1-208ENST00000485618 MED17Q9NVC6 651 aa7.51□□□□□ -1.21
SF3A1-208ENST00000485618 FLRT3Q9NZU0 649 aa7.51□□□□□ -1.21
SF3A1-208ENST00000485618 RPS6KB2Q9UBS0 482 aa7.51□□□□□ -1.21
SF3A1-208ENST00000485618 FBXL2Q9UKC9 423 aa7.51□□□□□ -1.21
SF3A1-208ENST00000485618 OSGIN2Q9Y236 505 aa7.51□□□□□ -1.21
SF3A1-208ENST00000485618 ZNF443Q9Y2A4 671 aaPredicted RBP7.51□□□□□ -1.21
SF3A1-208ENST00000485618 SLC9A8Q9Y2E8 581 aa7.51□□□□□ -1.21
SF3A1-208ENST00000485618 DSPPQ9NZW4 1301 aa7.51□□□□□ -1.21
SF3A1-208ENST00000485618 DNAJC13O75165 2243 aa7.5□□□□□ -1.21
SF3A1-208ENST00000485618 NPIPA5A0A0B4J1W7 369 aa7.5□□□□□ -1.21
SF3A1-208ENST00000485618 TRGV8A0A0C4DH27 118 aa7.5□□□□□ -1.21
SF3A1-208ENST00000485618 CDHR4A6H8M9 788 aa7.5□□□□□ -1.21
SF3A1-208ENST00000485618 NPIPA2E9PIF3 369 aa7.5□□□□□ -1.21
SF3A1-208ENST00000485618 NPIPA7E9PJI5 369 aa7.5□□□□□ -1.21
SF3A1-208ENST00000485618 NPIPA3F8WFD2 350 aa7.5□□□□□ -1.21
SF3A1-208ENST00000485618 M0QX08 132 aa7.5□□□□□ -1.21
SF3A1-208ENST00000485618 FXYD1O00168 92 aa7.5□□□□□ -1.21
SF3A1-208ENST00000485618 FAAHO00519 579 aa7.5□□□□□ -1.21
SF3A1-208ENST00000485618 GYG2O15488 501 aa7.5□□□□□ -1.21
SF3A1-208ENST00000485618 ZIC3O60481 467 aa7.5□□□□□ -1.21
SF3A1-208ENST00000485618 TPOP07202 933 aa7.5□□□□□ -1.21
SF3A1-208ENST00000485618 STSP08842 583 aa7.5□□□□□ -1.21
SF3A1-208ENST00000485618 NUDT7P0C024 238 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms