RNA–Protein interactions for RNA: ENST00000484309.5

MSH5-216, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 857 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-216ENST00000484309 KIR2DL3P43628 341 aa11.04□□□□□ -0.64
MSH5-216ENST00000484309 P2RX1P51575 399 aa11.04□□□□□ -0.64
MSH5-216ENST00000484309 EEFSECP57772 596 aaKnown RBP11.04□□□□□ -0.64
MSH5-216ENST00000484309 PPP2R2AP63151 447 aa11.04□□□□□ -0.64
MSH5-216ENST00000484309 MAPK14Q16539 360 aa11.04□□□□□ -0.64
MSH5-216ENST00000484309 GTDC1Q4AE62 458 aa11.04□□□□□ -0.64
MSH5-216ENST00000484309 GPAT3Q53EU6 434 aa11.04□□□□□ -0.64
MSH5-216ENST00000484309 COX20Q5RI15 118 aa11.04□□□□□ -0.64
MSH5-216ENST00000484309 ATAD3BQ5T9A4 648 aa11.04□□□□□ -0.64
MSH5-216ENST00000484309 TYW3Q6IPR3 259 aaKnown RBP11.04□□□□□ -0.64
MSH5-216ENST00000484309 HEPHL1Q6MZM0 1159 aa11.04□□□□□ -0.64
MSH5-216ENST00000484309 EPGNQ6UW88 154 aa11.04□□□□□ -0.64
MSH5-216ENST00000484309 FRRS1Q6ZNA5 592 aa11.04□□□□□ -0.64
MSH5-216ENST00000484309 METTL25Q8N6Q8 603 aa11.04□□□□□ -0.64
MSH5-216ENST00000484309 ATP6V1C2Q8NEY4 427 aa11.04□□□□□ -0.64
MSH5-216ENST00000484309 OR10D3Q8NH80 312 aa11.04□□□□□ -0.64
MSH5-216ENST00000484309 FBXO27Q8NI29 283 aa11.04□□□□□ -0.64
MSH5-216ENST00000484309 ROPN1LQ96C74 230 aa11.04□□□□□ -0.64
MSH5-216ENST00000484309 LRRC46Q96FV0 321 aa11.04□□□□□ -0.64
MSH5-216ENST00000484309 THOC1Q96FV9 657 aaKnown RBP11.04□□□□□ -0.64
MSH5-216ENST00000484309 ZFP3Q96NJ6 502 aa11.04□□□□□ -0.64
MSH5-216ENST00000484309 RBM24Q9BX46 236 aaKnown RBP11.04□□□□□ -0.64
MSH5-216ENST00000484309 ZNF350Q9GZX5 532 aa11.04□□□□□ -0.64
MSH5-216ENST00000484309 QRSL1Q9H0R6 528 aaKnown RBP11.04□□□□□ -0.64
MSH5-216ENST00000484309 HHATLQ9HCP6 504 aa11.04□□□□□ -0.64
MSH5-216ENST00000484309 CRIM1Q9NZV1 1036 aa11.04□□□□□ -0.64
MSH5-216ENST00000484309 JKAMPQ9P055 326 aa11.04□□□□□ -0.64
MSH5-216ENST00000484309 KCNN3Q9UGI6 736 aa11.04□□□□□ -0.64
MSH5-216ENST00000484309 CLEC4AQ9UMR7 237 aa11.04□□□□□ -0.64
MSH5-216ENST00000484309 WDR45Q9Y484 360 aa11.04□□□□□ -0.64
MSH5-216ENST00000484309 HRNRQ86YZ3 2850 aaPredicted RBP11.04□□□□□ -0.64
MSH5-216ENST00000484309 A0A0J9YW62 118 aa11.03□□□□□ -0.64
MSH5-216ENST00000484309 HMGB1P1B2RPK0 211 aaPredicted RBP11.03□□□□□ -0.64
MSH5-216ENST00000484309 HMGN4O00479 90 aa11.03□□□□□ -0.64
MSH5-216ENST00000484309 RFXANKO14593 260 aa11.03□□□□□ -0.64
MSH5-216ENST00000484309 POLR3GO15318 223 aaPredicted RBP11.03□□□□□ -0.64
MSH5-216ENST00000484309 ZNF264O43296 627 aa11.03□□□□□ -0.64
MSH5-216ENST00000484309 EFNA2O43921 213 aa11.03□□□□□ -0.64
MSH5-216ENST00000484309 KIAA0513O60268 411 aa11.03□□□□□ -0.64
MSH5-216ENST00000484309 BCAS1O75363 584 aaPredicted RBP11.03□□□□□ -0.64
MSH5-216ENST00000484309 AQP8O94778 261 aa11.03□□□□□ -0.64
MSH5-216ENST00000484309 CSTAP01040 98 aa11.03□□□□□ -0.64
MSH5-216ENST00000484309 UBTFL6P0CB48 400 aaPredicted RBP11.03□□□□□ -0.64
MSH5-216ENST00000484309 SLC6A8P48029 635 aa11.03□□□□□ -0.64
MSH5-216ENST00000484309 POLR2JP52435 117 aaKnown RBP11.03□□□□□ -0.64
MSH5-216ENST00000484309 RAC1P63000 192 aa11.03□□□□□ -0.64
MSH5-216ENST00000484309 HPCAP84074 193 aa11.03□□□□□ -0.64
MSH5-216ENST00000484309 ZNF141Q15928 474 aa11.03□□□□□ -0.64
MSH5-216ENST00000484309 SYPL1Q16563 259 aa11.03□□□□□ -0.64
MSH5-216ENST00000484309 GSTA3Q16772 222 aa11.03□□□□□ -0.64
MSH5-216ENST00000484309 CTU2Q2VPK5 515 aaKnown RBP11.03□□□□□ -0.64
MSH5-216ENST00000484309 FBXL19-AS1Q494R0 122 aa11.03□□□□□ -0.64
MSH5-216ENST00000484309 OR2A2Q6IF42 318 aa11.03□□□□□ -0.64
MSH5-216ENST00000484309 MIER2Q8N344 545 aa11.03□□□□□ -0.64
MSH5-216ENST00000484309 TRIML2Q8N7C3 387 aa11.03□□□□□ -0.64
MSH5-216ENST00000484309 ANKFN1Q8N957 763 aa11.03□□□□□ -0.64
MSH5-216ENST00000484309 GLB1L3Q8NCI6 653 aaPredicted RBP11.03□□□□□ -0.64
MSH5-216ENST00000484309 LINC01560Q8TB33 94 aa11.03□□□□□ -0.64
MSH5-216ENST00000484309 GPR119Q8TDV5 335 aa11.03□□□□□ -0.64
MSH5-216ENST00000484309 NRGNQ92686 78 aa11.03□□□□□ -0.64
MSH5-216ENST00000484309 VPS33AQ96AX1 596 aa11.03□□□□□ -0.64
MSH5-216ENST00000484309 ADGRG7Q96K78 797 aa11.03□□□□□ -0.64
MSH5-216ENST00000484309 THUMPD3Q9BV44 507 aaKnown RBP11.03□□□□□ -0.64
MSH5-216ENST00000484309 PRRG4Q9BZD6 226 aa11.03□□□□□ -0.64
MSH5-216ENST00000484309 NMUR2Q9GZQ4 415 aa11.03□□□□□ -0.64
MSH5-216ENST00000484309 OPN3Q9H1Y3 402 aaPredicted RBP11.03□□□□□ -0.64
MSH5-216ENST00000484309 ACBD3Q9H3P7 528 aa11.03□□□□□ -0.64
MSH5-216ENST00000484309 VIPAS39Q9H9C1 493 aa11.03□□□□□ -0.64
MSH5-216ENST00000484309 TCF7L2Q9NQB0 619 aa11.03□□□□□ -0.64
MSH5-216ENST00000484309 SDR39U1Q9NRG7 319 aaPredicted RBP11.03□□□□□ -0.64
MSH5-216ENST00000484309 INTS9Q9NV88 658 aaKnown RBP11.03□□□□□ -0.64
MSH5-216ENST00000484309 GALNT8Q9NY28 637 aa11.03□□□□□ -0.64
MSH5-216ENST00000484309 ZIM2Q9NZV7 527 aa11.03□□□□□ -0.64
MSH5-216ENST00000484309 ITGB1BP2Q9UKP3 347 aa11.03□□□□□ -0.64
MSH5-216ENST00000484309 PACSIN3Q9UKS6 424 aa11.03□□□□□ -0.64
MSH5-216ENST00000484309 ABCA4P78363 2273 aa11.03□□□□□ -0.64
MSH5-216ENST00000484309 C7orf72A4D263 438 aa11.02□□□□□ -0.65
MSH5-216ENST00000484309 CLDN24A6NM45 220 aa11.02□□□□□ -0.65
MSH5-216ENST00000484309 EIF4E2O60573 245 aaKnown RBP11.02□□□□□ -0.65
MSH5-216ENST00000484309 H6PDO95479 791 aa11.02□□□□□ -0.65
MSH5-216ENST00000484309 ANP32DO95626 131 aa11.02□□□□□ -0.65
MSH5-216ENST00000484309 AGR2O95994 175 aa11.02□□□□□ -0.65
MSH5-216ENST00000484309 IL6P05231 212 aa11.02□□□□□ -0.65
MSH5-216ENST00000484309 PRKCAP17252 672 aa11.02□□□□□ -0.65
MSH5-216ENST00000484309 ME2P23368 584 aa11.02□□□□□ -0.65
MSH5-216ENST00000484309 IDH3AP50213 366 aa11.02□□□□□ -0.65
MSH5-216ENST00000484309 AQP5P55064 265 aa11.02□□□□□ -0.65
MSH5-216ENST00000484309 SUMO3P55854 103 aaPredicted RBP11.02□□□□□ -0.65
MSH5-216ENST00000484309 CHRNEQ04844 493 aa11.02□□□□□ -0.65
MSH5-216ENST00000484309 SKP2Q13309 424 aa11.02□□□□□ -0.65
MSH5-216ENST00000484309 FGFBP1Q14512 234 aa11.02□□□□□ -0.65
MSH5-216ENST00000484309 QPRTQ15274 297 aa11.02□□□□□ -0.65
MSH5-216ENST00000484309 C6orf10Q5SRN2 563 aa11.02□□□□□ -0.65
MSH5-216ENST00000484309 HBMQ6B0K9 141 aa11.02□□□□□ -0.65
MSH5-216ENST00000484309 BTLAQ7Z6A9 289 aa11.02□□□□□ -0.65
MSH5-216ENST00000484309 LURAP1LQ8IV03 231 aa11.02□□□□□ -0.65
MSH5-216ENST00000484309 LILRA2Q8N149 483 aa11.02□□□□□ -0.65
MSH5-216ENST00000484309 ZNF619Q8N2I2 560 aa11.02□□□□□ -0.65
MSH5-216ENST00000484309 TOR1AIP2Q8NFQ8 470 aa11.02□□□□□ -0.65
MSH5-216ENST00000484309 OR5W2Q8NH69 310 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms