RNA–Protein interactions for RNA: ENST00000482714.5

CCM2-215, Transcript of CCM2 scaffold protein, human

TSL 2

Gene CCM2, Length 1,459 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCM2-215	ENST00000482714		A0A1W2PRS3	328 aa		13.95	□□□□□ -0.18
CCM2-215	ENST00000482714	CFAP73	A6NFT4	308 aa		13.95	□□□□□ -0.18
CCM2-215	ENST00000482714	KIR3DP1	A8MWS1	328 aa		13.95	□□□□□ -0.18
CCM2-215	ENST00000482714	FAM47E-STBD1	D6RA91	191 aa		13.95	□□□□□ -0.18
CCM2-215	ENST00000482714	ETV2	O00321	342 aa	Predicted RBP	13.95	□□□□□ -0.18
CCM2-215	ENST00000482714	LINGO3	P0C6S8	592 aa		13.95	□□□□□ -0.18
CCM2-215	ENST00000482714	UBTFL6	P0CB48	400 aa	Predicted RBP	13.95	□□□□□ -0.18
CCM2-215	ENST00000482714	DPP4	P27487	766 aa		13.95	□□□□□ -0.18
CCM2-215	ENST00000482714	MAP2K6	P52564	334 aa		13.95	□□□□□ -0.18
CCM2-215	ENST00000482714	CRYBA2	P53672	197 aa		13.95	□□□□□ -0.18
CCM2-215	ENST00000482714	DLX5	P56178	289 aa		13.95	□□□□□ -0.18
CCM2-215	ENST00000482714	ZNF117	Q03924	483 aa		13.95	□□□□□ -0.18
CCM2-215	ENST00000482714	INPP5J	Q15735	1006 aa	Predicted RBP	13.95	□□□□□ -0.18
CCM2-215	ENST00000482714	ZNF324B	Q6AW86	544 aa	Predicted RBP	13.95	□□□□□ -0.18
CCM2-215	ENST00000482714	OR5M10	Q6IEU7	315 aa		13.95	□□□□□ -0.18
CCM2-215	ENST00000482714	LCN8	Q6JVE9	175 aa		13.95	□□□□□ -0.18
CCM2-215	ENST00000482714	CBLN3	Q6UW01	205 aa		13.95	□□□□□ -0.18
CCM2-215	ENST00000482714	ULK2	Q8IYT8	1036 aa		13.95	□□□□□ -0.18
CCM2-215	ENST00000482714	GATS	Q8NAP1	163 aa		13.95	□□□□□ -0.18
CCM2-215	ENST00000482714	FAM156A	Q8NDB6	213 aa		13.95	□□□□□ -0.18
CCM2-215	ENST00000482714	GPR119	Q8TDV5	335 aa		13.95	□□□□□ -0.18
CCM2-215	ENST00000482714	CNOT9	Q92600	299 aa	Known RBP	13.95	□□□□□ -0.18
CCM2-215	ENST00000482714	ZBTB8A	Q96BR9	441 aa		13.95	□□□□□ -0.18
CCM2-215	ENST00000482714	C1GALT1C1	Q96EU7	318 aa		13.95	□□□□□ -0.18
CCM2-215	ENST00000482714	BBC3	Q96PG8	261 aa	Predicted RBP	13.95	□□□□□ -0.18
CCM2-215	ENST00000482714	PCDHAC1	Q9H158	963 aa		13.95	□□□□□ -0.18
CCM2-215	ENST00000482714	ZNF703	Q9H7S9	590 aa	Predicted RBP	13.95	□□□□□ -0.18
CCM2-215	ENST00000482714	RLIM	Q9NVW2	624 aa		13.95	□□□□□ -0.18
CCM2-215	ENST00000482714	GMPR2	Q9P2T1	348 aa	Known RBP	13.95	□□□□□ -0.18
CCM2-215	ENST00000482714	SLC9A8	Q9Y2E8	581 aa		13.95	□□□□□ -0.18
CCM2-215	ENST00000482714	C7orf72	A4D263	438 aa		13.94	□□□□□ -0.18
CCM2-215	ENST00000482714	CLDN24	A6NM45	220 aa		13.94	□□□□□ -0.18
CCM2-215	ENST00000482714	TTLL8	A6PVC2	850 aa		13.94	□□□□□ -0.18
CCM2-215	ENST00000482714	ARPC2	O15144	300 aa		13.94	□□□□□ -0.18
CCM2-215	ENST00000482714	SUSD5	O60279	629 aa		13.94	□□□□□ -0.18
CCM2-215	ENST00000482714	ZIC3	O60481	467 aa		13.94	□□□□□ -0.18
CCM2-215	ENST00000482714	TPST1	O60507	370 aa		13.94	□□□□□ -0.18
CCM2-215	ENST00000482714	HCN1	O60741	890 aa		13.94	□□□□□ -0.18
CCM2-215	ENST00000482714	FMO6P	O60774	539 aa		13.94	□□□□□ -0.18
CCM2-215	ENST00000482714	IGHG3	P01860	377 aa		13.94	□□□□□ -0.18
CCM2-215	ENST00000482714	RFPL3S	P0C7P2	107 aa		13.94	□□□□□ -0.18
CCM2-215	ENST00000482714	CD247	P20963	164 aa		13.94	□□□□□ -0.18
CCM2-215	ENST00000482714	FKBP2	P26885	142 aa	Known RBP	13.94	□□□□□ -0.18
CCM2-215	ENST00000482714	HTR3A	P46098	478 aa		13.94	□□□□□ -0.18
CCM2-215	ENST00000482714	COPZ1	P61923	177 aa		13.94	□□□□□ -0.18
CCM2-215	ENST00000482714	NFATC3	Q12968	1075 aa		13.94	□□□□□ -0.18
CCM2-215	ENST00000482714	LRRC23	Q53EV4	343 aa	Predicted RBP	13.94	□□□□□ -0.18
CCM2-215	ENST00000482714	SLC25A53	Q5H9E4	307 aa		13.94	□□□□□ -0.18
CCM2-215	ENST00000482714	CISD2	Q8N5K1	135 aa	Known RBP	13.94	□□□□□ -0.18
CCM2-215	ENST00000482714	LSMEM1	Q8N8F7	131 aa		13.94	□□□□□ -0.18
CCM2-215	ENST00000482714	SMYD1	Q8NB12	490 aa		13.94	□□□□□ -0.18
CCM2-215	ENST00000482714	ST8SIA1	Q92185	356 aa		13.94	□□□□□ -0.18
CCM2-215	ENST00000482714	NR4A3	Q92570	626 aa		13.94	□□□□□ -0.18
CCM2-215	ENST00000482714	SNRNP40	Q96DI7	357 aa	Known RBP	13.94	□□□□□ -0.18
CCM2-215	ENST00000482714	TRIM15	Q9C019	465 aa		13.94	□□□□□ -0.18
CCM2-215	ENST00000482714	OR2B2	Q9GZK3	357 aa		13.94	□□□□□ -0.18
CCM2-215	ENST00000482714	STOML1	Q9UBI4	398 aa		13.94	□□□□□ -0.18
CCM2-215	ENST00000482714	FBXL2	Q9UKC9	423 aa		13.94	□□□□□ -0.18
CCM2-215	ENST00000482714		A0A1B0GVC2	190 aa		13.93	□□□□□ -0.18
CCM2-215	ENST00000482714	AQP12B	A6NM10	295 aa		13.93	□□□□□ -0.18
CCM2-215	ENST00000482714	ACOT8	O14734	319 aa		13.93	□□□□□ -0.18
CCM2-215	ENST00000482714	TFEC	O14948	347 aa	Predicted RBP	13.93	□□□□□ -0.18
CCM2-215	ENST00000482714	CYP7B1	O75881	506 aa		13.93	□□□□□ -0.18
CCM2-215	ENST00000482714	SERPINA1	P01009	418 aa		13.93	□□□□□ -0.18
CCM2-215	ENST00000482714	UMPS	P11172	480 aa		13.93	□□□□□ -0.18
CCM2-215	ENST00000482714	NCK1	P16333	377 aa		13.93	□□□□□ -0.18
CCM2-215	ENST00000482714	GDF1	P27539	372 aa		13.93	□□□□□ -0.18
CCM2-215	ENST00000482714	MSX2	P35548	267 aa	Predicted RBP	13.93	□□□□□ -0.18
CCM2-215	ENST00000482714	GCK	P35557	465 aa		13.93	□□□□□ -0.18
CCM2-215	ENST00000482714	ACAA2	P42765	397 aa	Known RBP	13.93	□□□□□ -0.18
CCM2-215	ENST00000482714	ZNF41	P51814	821 aa	Predicted RBP	13.93	□□□□□ -0.18
CCM2-215	ENST00000482714	MS4A2	Q01362	244 aa		13.93	□□□□□ -0.18
CCM2-215	ENST00000482714	KCNC4	Q03721	635 aa		13.93	□□□□□ -0.18
CCM2-215	ENST00000482714	EPS8	Q12929	822 aa		13.93	□□□□□ -0.18
CCM2-215	ENST00000482714	NRF1	Q16656	503 aa		13.93	□□□□□ -0.18
CCM2-215	ENST00000482714	SIAH3	Q8IW03	269 aa		13.93	□□□□□ -0.18
CCM2-215	ENST00000482714	AQP12A	Q8IXF9	295 aa		13.93	□□□□□ -0.18
CCM2-215	ENST00000482714	GPR32P1	Q8NGA4	272 aa		13.93	□□□□□ -0.18
CCM2-215	ENST00000482714	SH3YL1	Q96HL8	342 aa	Predicted RBP	13.93	□□□□□ -0.18
CCM2-215	ENST00000482714	PYURF	Q96I23	114 aa		13.93	□□□□□ -0.18
CCM2-215	ENST00000482714	CLPTM1L	Q96KA5	538 aa		13.93	□□□□□ -0.18
CCM2-215	ENST00000482714	MRGPRX4	Q96LA9	322 aa		13.93	□□□□□ -0.18
CCM2-215	ENST00000482714	LRGUK	Q96M69	825 aa		13.93	□□□□□ -0.18
CCM2-215	ENST00000482714	ARHGDIG	Q99819	225 aa		13.93	□□□□□ -0.18
CCM2-215	ENST00000482714	RSPO3	Q9BXY4	272 aa	Predicted RBP	13.93	□□□□□ -0.18
CCM2-215	ENST00000482714	TRIM2	Q9C040	744 aa		13.93	□□□□□ -0.18
CCM2-215	ENST00000482714	POLR2J2	Q9GZM3	115 aa	Known RBP	13.93	□□□□□ -0.18
CCM2-215	ENST00000482714	POLR2J3	Q9H1A7	115 aa	Known RBP	13.93	□□□□□ -0.18
CCM2-215	ENST00000482714	PLSCR2	Q9NRY7	297 aa		13.93	□□□□□ -0.18
CCM2-215	ENST00000482714	TAS2R10	Q9NYW0	307 aa		13.93	□□□□□ -0.18
CCM2-215	ENST00000482714	TES	Q9UGI8	421 aa	Known RBP	13.93	□□□□□ -0.18
CCM2-215	ENST00000482714	SLC7A8	Q9UHI5	535 aa		13.93	□□□□□ -0.18
CCM2-215	ENST00000482714	POMP	Q9Y244	141 aa		13.93	□□□□□ -0.18
CCM2-215	ENST00000482714	SH3GLB1	Q9Y371	365 aa		13.93	□□□□□ -0.18
CCM2-215	ENST00000482714	COL6A6	A6NMZ7	2263 aa		13.93	□□□□□ -0.18
CCM2-215	ENST00000482714	TNFSF12-TNFSF13	A0A0A6YY99	330 aa		13.93	□□□□□ -0.18
CCM2-215	ENST00000482714	TMEM229A	B2RXF0	380 aa		13.93	□□□□□ -0.18
CCM2-215	ENST00000482714	TRAPPC6A	O75865	159 aa		13.93	□□□□□ -0.18
CCM2-215	ENST00000482714	PDE5A	O76074	875 aa		13.93	□□□□□ -0.18
CCM2-215	ENST00000482714	NUDT14	O95848	222 aa		13.93	□□□□□ -0.18

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