RNA–Protein interactions for RNA: ENST00000482158.1

SF3B1-210, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 772 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-210ENST00000482158 C12orf66Q96MD2 445 aa4.06□□□□□ -1.76
SF3B1-210ENST00000482158 MCHR1Q99705 422 aa4.06□□□□□ -1.76
SF3B1-210ENST00000482158 YTHDF1Q9BYJ9 559 aaKnown RBP4.06□□□□□ -1.76
SF3B1-210ENST00000482158 FARSBQ9NSD9 589 aaKnown RBP4.06□□□□□ -1.76
SF3B1-210ENST00000482158 ZNF221Q9UK13 617 aa4.06□□□□□ -1.76
SF3B1-210ENST00000482158 TNFSF11O14788 317 aa4.05□□□□□ -1.76
SF3B1-210ENST00000482158 BCAS1O75363 584 aaPredicted RBP4.05□□□□□ -1.76
SF3B1-210ENST00000482158 LY6G6DO95868 133 aa4.05□□□□□ -1.76
SF3B1-210ENST00000482158 PTMAP06454 111 aaKnown RBP4.05□□□□□ -1.76
SF3B1-210ENST00000482158 IQCF3P0C7M6 154 aa4.05□□□□□ -1.76
SF3B1-210ENST00000482158 SERPINA2P20848 420 aa4.05□□□□□ -1.76
SF3B1-210ENST00000482158 HNRNPA2B1P22626 353 aaKnown RBP4.05□□□□□ -1.76
SF3B1-210ENST00000482158 P2RY4P51582 365 aa4.05□□□□□ -1.76
SF3B1-210ENST00000482158 METTL11BQ5VVY1 283 aa4.05□□□□□ -1.76
SF3B1-210ENST00000482158 GALNT17Q6IS24 598 aa4.05□□□□□ -1.76
SF3B1-210ENST00000482158 FAM71F2Q6NXP2 309 aa4.05□□□□□ -1.76
SF3B1-210ENST00000482158 BLOC1S2Q6QNY1 142 aa4.05□□□□□ -1.76
SF3B1-210ENST00000482158 OR5L2Q8NGL0 311 aa4.05□□□□□ -1.76
SF3B1-210ENST00000482158 PNPT1Q8TCS8 783 aaKnown RBP4.05□□□□□ -1.76
SF3B1-210ENST00000482158 TMEM117Q9H0C3 514 aa4.05□□□□□ -1.76
SF3B1-210ENST00000482158 SDAD1Q9NVU7 687 aaKnown RBP eCLIP4.05□□□□□ -1.76
SF3B1-210ENST00000482158 B3GNT2Q9NY97 397 aa4.05□□□□□ -1.76
SF3B1-210ENST00000482158 SIGLEC8Q9NYZ4 499 aa4.05□□□□□ -1.76
SF3B1-210ENST00000482158 ONECUT1Q9UBC0 465 aa4.05□□□□□ -1.76
SF3B1-210ENST00000482158 B4DXG7 233 aa4.04□□□□□ -1.76
SF3B1-210ENST00000482158 TBX19O60806 448 aa4.04□□□□□ -1.76
SF3B1-210ENST00000482158 GCFC2P16383 781 aaKnown RBP4.04□□□□□ -1.76
SF3B1-210ENST00000482158 ZNF19P17023 458 aa4.04□□□□□ -1.76
SF3B1-210ENST00000482158 CYP2B6P20813 491 aa4.04□□□□□ -1.76
SF3B1-210ENST00000482158 ATP6V1C1P21283 382 aa4.04□□□□□ -1.76
SF3B1-210ENST00000482158 ZBTB25P24278 435 aa4.04□□□□□ -1.76
SF3B1-210ENST00000482158 CD80P33681 288 aa4.04□□□□□ -1.76
SF3B1-210ENST00000482158 HPCAL1P37235 193 aa4.04□□□□□ -1.76
SF3B1-210ENST00000482158 KIR2DS2P43631 304 aa4.04□□□□□ -1.76
SF3B1-210ENST00000482158 RGS4P49798 205 aa4.04□□□□□ -1.76
SF3B1-210ENST00000482158 EFNA3P52797 238 aa4.04□□□□□ -1.76
SF3B1-210ENST00000482158 OC90Q02509 493 aaPredicted RBP4.04□□□□□ -1.76
SF3B1-210ENST00000482158 CSTF1Q05048 431 aaKnown RBP4.04□□□□□ -1.76
SF3B1-210ENST00000482158 SYPL1Q16563 259 aa4.04□□□□□ -1.76
SF3B1-210ENST00000482158 AANATQ16613 207 aa4.04□□□□□ -1.76
SF3B1-210ENST00000482158 FRA10AC1Q70Z53 315 aa4.04□□□□□ -1.76
SF3B1-210ENST00000482158 MOB1BQ7L9L4 216 aa4.04□□□□□ -1.76
SF3B1-210ENST00000482158 THRSPQ92748 146 aa4.04□□□□□ -1.76
SF3B1-210ENST00000482158 ZNF184Q99676 751 aaPredicted RBP4.04□□□□□ -1.76
SF3B1-210ENST00000482158 MAPKAP1Q9BPZ7 522 aa4.04□□□□□ -1.76
SF3B1-210ENST00000482158 RNF126Q9BV68 326 aa4.04□□□□□ -1.76
SF3B1-210ENST00000482158 CHIAQ9BZP6 476 aa4.04□□□□□ -1.76
SF3B1-210ENST00000482158 ELOVL3Q9HB03 270 aa4.04□□□□□ -1.76
SF3B1-210ENST00000482158 PLSCR3Q9NRY6 295 aa4.04□□□□□ -1.76
SF3B1-210ENST00000482158 OR10H1Q9Y4A9 318 aa4.04□□□□□ -1.76
SF3B1-210ENST00000482158 FRMPD3Q5JV73 1810 aa4.03□□□□□ -1.76
SF3B1-210ENST00000482158 A8MUI8 341 aa4.03□□□□□ -1.76
SF3B1-210ENST00000482158 BTN3A3O00478 584 aa4.03□□□□□ -1.76
SF3B1-210ENST00000482158 MSH4O15457 936 aa4.03□□□□□ -1.76
SF3B1-210ENST00000482158 LYPD3O95274 346 aa4.03□□□□□ -1.76
SF3B1-210ENST00000482158 SEMG1P04279 462 aa4.03□□□□□ -1.76
SF3B1-210ENST00000482158 VDAC1P21796 283 aa4.03□□□□□ -1.76
SF3B1-210ENST00000482158 OR3A4PP47883 348 aa4.03□□□□□ -1.76
SF3B1-210ENST00000482158 NOVP48745 357 aa4.03□□□□□ -1.76
SF3B1-210ENST00000482158 DIO3P55073 304 aa4.03□□□□□ -1.76
SF3B1-210ENST00000482158 BCL2L1Q07817 233 aa4.03□□□□□ -1.76
SF3B1-210ENST00000482158 EGFEM1PQ0D2K5 195 aa4.03□□□□□ -1.76
SF3B1-210ENST00000482158 CUL1Q13616 776 aa4.03□□□□□ -1.76
SF3B1-210ENST00000482158 MXD4Q14582 209 aaPredicted RBP4.03□□□□□ -1.76
SF3B1-210ENST00000482158 PDK4Q16654 411 aa4.03□□□□□ -1.76
SF3B1-210ENST00000482158 GMCL1P1Q8NEA9 526 aa4.03□□□□□ -1.76
SF3B1-210ENST00000482158 OR51G2Q8NGK0 314 aa4.03□□□□□ -1.76
SF3B1-210ENST00000482158 OR2T3Q8NH03 318 aa4.03□□□□□ -1.76
SF3B1-210ENST00000482158 IL4I1Q96RQ9 567 aa4.03□□□□□ -1.76
SF3B1-210ENST00000482158 RIT2Q99578 217 aa4.03□□□□□ -1.76
SF3B1-210ENST00000482158 ERP44Q9BS26 406 aa4.03□□□□□ -1.76
SF3B1-210ENST00000482158 RMND5AQ9H871 391 aa4.03□□□□□ -1.76
SF3B1-210ENST00000482158 FANCFQ9NPI8 374 aa4.03□□□□□ -1.76
SF3B1-210ENST00000482158 IL17CQ9P0M4 197 aa4.03□□□□□ -1.76
SF3B1-210ENST00000482158 MAB21L2Q9Y586 359 aa4.03□□□□□ -1.76
SF3B1-210ENST00000482158 ZNF318Q5VUA4 2279 aa4.03□□□□□ -1.76
SF3B1-210ENST00000482158 IGHV2-70DA0A0C4DH43 119 aa4.02□□□□□ -1.77
SF3B1-210ENST00000482158 A0A1B0GWB2 263 aa4.02□□□□□ -1.77
SF3B1-210ENST00000482158 KLLNB2CW77 178 aa4.02□□□□□ -1.77
SF3B1-210ENST00000482158 ADSSP30520 456 aa4.02□□□□□ -1.77
SF3B1-210ENST00000482158 TATDN3Q17R31 274 aa4.02□□□□□ -1.77
SF3B1-210ENST00000482158 LRRC36Q1X8D7 754 aa4.02□□□□□ -1.77
SF3B1-210ENST00000482158 SKA3Q8IX90 412 aa4.02□□□□□ -1.77
SF3B1-210ENST00000482158 SLC38A6Q8IZM9 456 aa4.02□□□□□ -1.77
SF3B1-210ENST00000482158 CLDN19Q8N6F1 224 aa4.02□□□□□ -1.77
SF3B1-210ENST00000482158 KIR3DL3Q8N743 410 aa4.02□□□□□ -1.77
SF3B1-210ENST00000482158 ZNF540Q8NDQ6 660 aa4.02□□□□□ -1.77
SF3B1-210ENST00000482158 OR10H4Q8NGA5 316 aa4.02□□□□□ -1.77
SF3B1-210ENST00000482158 AMDHD1Q96NU7 426 aa4.02□□□□□ -1.77
SF3B1-210ENST00000482158 ALG12Q9BV10 488 aa4.02□□□□□ -1.77
SF3B1-210ENST00000482158 NMUR2Q9GZQ4 415 aa4.02□□□□□ -1.77
SF3B1-210ENST00000482158 SCML2Q9UQR0 700 aa4.02□□□□□ -1.77
SF3B1-210ENST00000482158 IGHV1OR15-1A0A075B7D0 117 aa4.01□□□□□ -1.77
SF3B1-210ENST00000482158 A0A1W2PNV4 684 aa4.01□□□□□ -1.77
SF3B1-210ENST00000482158 TUBAL3A6NHL2 446 aa4.01□□□□□ -1.77
SF3B1-210ENST00000482158 G3V4G9 280 aa4.01□□□□□ -1.77
SF3B1-210ENST00000482158 HAT1O14929 419 aa4.01□□□□□ -1.77
SF3B1-210ENST00000482158 LYPLA1O75608 230 aaPredicted RBP4.01□□□□□ -1.77
SF3B1-210ENST00000482158 OR8U8P0C7N1 319 aa4.01□□□□□ -1.77
SF3B1-210ENST00000482158 RPA2P15927 270 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms