RNA–Protein interactions for RNA: ENST00000481116.5

ABCF3-215, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 4

Gene ABCF3, Length 568 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-215ENST00000481116 HMGN4O00479 90 aa11.56□□□□□ -0.56
ABCF3-215ENST00000481116 CXCL13O43927 109 aa11.56□□□□□ -0.56
ABCF3-215ENST00000481116 BCAS1O75363 584 aaPredicted RBP11.56□□□□□ -0.56
ABCF3-215ENST00000481116 SMNDC1O75940 238 aaKnown RBP eCLIP11.56□□□□□ -0.56
ABCF3-215ENST00000481116 AK1P00568 194 aa11.56□□□□□ -0.56
ABCF3-215ENST00000481116 UBL4AP11441 157 aa11.56□□□□□ -0.56
ABCF3-215ENST00000481116 SFTPDP35247 375 aa11.56□□□□□ -0.56
ABCF3-215ENST00000481116 KIR2DL2P43627 348 aaPredicted RBP11.56□□□□□ -0.56
ABCF3-215ENST00000481116 KHKP50053 298 aa11.56□□□□□ -0.56
ABCF3-215ENST00000481116 CCR4P51679 360 aa11.56□□□□□ -0.56
ABCF3-215ENST00000481116 RPS3AP61247 264 aaKnown RBP11.56□□□□□ -0.56
ABCF3-215ENST00000481116 RAC1P63000 192 aa11.56□□□□□ -0.56
ABCF3-215ENST00000481116 PPP2R2AP63151 447 aa11.56□□□□□ -0.56
ABCF3-215ENST00000481116 ZNF141Q15928 474 aa11.56□□□□□ -0.56
ABCF3-215ENST00000481116 SYPL1Q16563 259 aa11.56□□□□□ -0.56
ABCF3-215ENST00000481116 GSTA3Q16772 222 aa11.56□□□□□ -0.56
ABCF3-215ENST00000481116 CTU2Q2VPK5 515 aaKnown RBP11.56□□□□□ -0.56
ABCF3-215ENST00000481116 GTDC1Q4AE62 458 aa11.56□□□□□ -0.56
ABCF3-215ENST00000481116 GPAT3Q53EU6 434 aa11.56□□□□□ -0.56
ABCF3-215ENST00000481116 ATAD3BQ5T9A4 648 aa11.56□□□□□ -0.56
ABCF3-215ENST00000481116 TYW3Q6IPR3 259 aaKnown RBP11.56□□□□□ -0.56
ABCF3-215ENST00000481116 FRRS1Q6ZNA5 592 aa11.56□□□□□ -0.56
ABCF3-215ENST00000481116 BTLAQ7Z6A9 289 aa11.56□□□□□ -0.56
ABCF3-215ENST00000481116 TMEM200AQ86VY9 491 aa11.56□□□□□ -0.56
ABCF3-215ENST00000481116 ATP6V1C2Q8NEY4 427 aa11.56□□□□□ -0.56
ABCF3-215ENST00000481116 OR10D3Q8NH80 312 aa11.56□□□□□ -0.56
ABCF3-215ENST00000481116 DYDC1Q8WWB3 177 aa11.56□□□□□ -0.56
ABCF3-215ENST00000481116 NRGNQ92686 78 aa11.56□□□□□ -0.56
ABCF3-215ENST00000481116 VPS33AQ96AX1 596 aa11.56□□□□□ -0.56
ABCF3-215ENST00000481116 ROPN1LQ96C74 230 aa11.56□□□□□ -0.56
ABCF3-215ENST00000481116 STARD4Q96DR4 205 aa11.56□□□□□ -0.56
ABCF3-215ENST00000481116 LRRC46Q96FV0 321 aa11.56□□□□□ -0.56
ABCF3-215ENST00000481116 ADGRG7Q96K78 797 aa11.56□□□□□ -0.56
ABCF3-215ENST00000481116 C7orf26Q96N11 449 aa11.56□□□□□ -0.56
ABCF3-215ENST00000481116 THUMPD3Q9BV44 507 aaKnown RBP11.56□□□□□ -0.56
ABCF3-215ENST00000481116 NMUR2Q9GZQ4 415 aa11.56□□□□□ -0.56
ABCF3-215ENST00000481116 QRSL1Q9H0R6 528 aaKnown RBP11.56□□□□□ -0.56
ABCF3-215ENST00000481116 OPN3Q9H1Y3 402 aaPredicted RBP11.56□□□□□ -0.56
ABCF3-215ENST00000481116 HHATLQ9HCP6 504 aa11.56□□□□□ -0.56
ABCF3-215ENST00000481116 ARGLU1Q9NWB6 273 aaPredicted RBP11.56□□□□□ -0.56
ABCF3-215ENST00000481116 GALNT8Q9NY28 637 aa11.56□□□□□ -0.56
ABCF3-215ENST00000481116 ITGB1BP2Q9UKP3 347 aa11.56□□□□□ -0.56
ABCF3-215ENST00000481116 CLEC4AQ9UMR7 237 aa11.56□□□□□ -0.56
ABCF3-215ENST00000481116 WDR45Q9Y484 360 aa11.56□□□□□ -0.56
ABCF3-215ENST00000481116 AKAP9Q99996 3911 aa11.56□□□□□ -0.56
ABCF3-215ENST00000481116 HRNRQ86YZ3 2850 aaPredicted RBP11.55□□□□□ -0.56
ABCF3-215ENST00000481116 C7orf72A4D263 438 aa11.55□□□□□ -0.56
ABCF3-215ENST00000481116 CLDN24A6NM45 220 aa11.55□□□□□ -0.56
ABCF3-215ENST00000481116 HMGB1P1B2RPK0 211 aaPredicted RBP11.55□□□□□ -0.56
ABCF3-215ENST00000481116 RFXANKO14593 260 aa11.55□□□□□ -0.56
ABCF3-215ENST00000481116 ZNF264O43296 627 aa11.55□□□□□ -0.56
ABCF3-215ENST00000481116 KIAA0513O60268 411 aa11.55□□□□□ -0.56
ABCF3-215ENST00000481116 H6PDO95479 791 aa11.55□□□□□ -0.56
ABCF3-215ENST00000481116 CSTAP01040 98 aa11.55□□□□□ -0.56
ABCF3-215ENST00000481116 UBTFL6P0CB48 400 aaPredicted RBP11.55□□□□□ -0.56
ABCF3-215ENST00000481116 PRKCAP17252 672 aa11.55□□□□□ -0.56
ABCF3-215ENST00000481116 CPA2P48052 419 aa11.55□□□□□ -0.56
ABCF3-215ENST00000481116 IDH3AP50213 366 aa11.55□□□□□ -0.56
ABCF3-215ENST00000481116 POLR2JP52435 117 aaKnown RBP11.55□□□□□ -0.56
ABCF3-215ENST00000481116 CHRNEQ04844 493 aa11.55□□□□□ -0.56
ABCF3-215ENST00000481116 SKP2Q13309 424 aa11.55□□□□□ -0.56
ABCF3-215ENST00000481116 TIGD2Q4W5G0 525 aa11.55□□□□□ -0.56
ABCF3-215ENST00000481116 LILRA2Q8N149 483 aa11.55□□□□□ -0.56
ABCF3-215ENST00000481116 TRIML2Q8N7C3 387 aa11.55□□□□□ -0.56
ABCF3-215ENST00000481116 GOLGA6L1Q8N7Z2 621 aa11.55□□□□□ -0.56
ABCF3-215ENST00000481116 ANKFN1Q8N957 763 aa11.55□□□□□ -0.56
ABCF3-215ENST00000481116 GLB1L3Q8NCI6 653 aaPredicted RBP11.55□□□□□ -0.56
ABCF3-215ENST00000481116 OR5W2Q8NH69 310 aa11.55□□□□□ -0.56
ABCF3-215ENST00000481116 THOC1Q96FV9 657 aaKnown RBP11.55□□□□□ -0.56
ABCF3-215ENST00000481116 GPATCH1Q9BRR8 931 aaKnown RBP11.55□□□□□ -0.56
ABCF3-215ENST00000481116 PRRG4Q9BZD6 226 aa11.55□□□□□ -0.56
ABCF3-215ENST00000481116 ACBD3Q9H3P7 528 aa11.55□□□□□ -0.56
ABCF3-215ENST00000481116 VIPAS39Q9H9C1 493 aa11.55□□□□□ -0.56
ABCF3-215ENST00000481116 RNF122Q9H9V4 155 aa11.55□□□□□ -0.56
ABCF3-215ENST00000481116 SDR39U1Q9NRG7 319 aaPredicted RBP11.55□□□□□ -0.56
ABCF3-215ENST00000481116 INTS9Q9NV88 658 aaKnown RBP11.55□□□□□ -0.56
ABCF3-215ENST00000481116 ZIM2Q9NZV7 527 aa11.55□□□□□ -0.56
ABCF3-215ENST00000481116 POLQO75417 2590 aa11.55□□□□□ -0.56
ABCF3-215ENST00000481116 FREM1Q5H8C1 2179 aa11.54□□□□□ -0.56
ABCF3-215ENST00000481116 ANKRD17O75179 2603 aaKnown RBP11.54□□□□□ -0.56
ABCF3-215ENST00000481116 A8MXE2 369 aa11.54□□□□□ -0.56
ABCF3-215ENST00000481116 EIF4E2O60573 245 aaKnown RBP11.54□□□□□ -0.56
ABCF3-215ENST00000481116 AGR2O95994 175 aa11.54□□□□□ -0.56
ABCF3-215ENST00000481116 IL6P05231 212 aa11.54□□□□□ -0.56
ABCF3-215ENST00000481116 CHRM4P08173 479 aa11.54□□□□□ -0.56
ABCF3-215ENST00000481116 CD1EP15812 388 aa11.54□□□□□ -0.56
ABCF3-215ENST00000481116 CPOXP36551 454 aa11.54□□□□□ -0.56
ABCF3-215ENST00000481116 FGFBP1Q14512 234 aa11.54□□□□□ -0.56
ABCF3-215ENST00000481116 QPRTQ15274 297 aa11.54□□□□□ -0.56
ABCF3-215ENST00000481116 HBMQ6B0K9 141 aa11.54□□□□□ -0.56
ABCF3-215ENST00000481116 OR2A2Q6IF42 318 aa11.54□□□□□ -0.56
ABCF3-215ENST00000481116 ZNF619Q8N2I2 560 aa11.54□□□□□ -0.56
ABCF3-215ENST00000481116 MIER2Q8N344 545 aa11.54□□□□□ -0.56
ABCF3-215ENST00000481116 TOR1AIP2Q8NFQ8 470 aa11.54□□□□□ -0.56
ABCF3-215ENST00000481116 OR2V1Q8NHB1 315 aa11.54□□□□□ -0.56
ABCF3-215ENST00000481116 ZFP90Q8TF47 636 aa11.54□□□□□ -0.56
ABCF3-215ENST00000481116 ROBO4Q8WZ75 1007 aa11.54□□□□□ -0.56
ABCF3-215ENST00000481116 OSTF1Q92882 214 aa11.54□□□□□ -0.56
ABCF3-215ENST00000481116 AURKBQ96GD4 344 aaPredicted RBP11.54□□□□□ -0.56
ABCF3-215ENST00000481116 KLHL15Q96M94 604 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms