RNA–Protein interactions for RNA: ENST00000474665.1

LIMD1-204, Transcript of LIM domains containing 1, humanhuman

TSL 3

Gene LIMD1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-204ENST00000474665 TAMM41Q96BW9 452 aa6.34□□□□□ -1.39
LIMD1-204ENST00000474665 SLC7A6OSQ96CW6 309 aaPredicted RBP6.34□□□□□ -1.39
LIMD1-204ENST00000474665 REXO5Q96IC2 774 aaKnown RBP6.34□□□□□ -1.39
LIMD1-204ENST00000474665 ZNF597Q96LX8 424 aa6.34□□□□□ -1.39
LIMD1-204ENST00000474665 JSRP1Q96MG2 331 aaPredicted RBP6.34□□□□□ -1.39
LIMD1-204ENST00000474665 HOPXQ9BPY8 73 aaPredicted RBP6.34□□□□□ -1.39
LIMD1-204ENST00000474665 TBL1XR1Q9BZK7 514 aa6.34□□□□□ -1.39
LIMD1-204ENST00000474665 HOXD1Q9GZZ0 328 aa6.34□□□□□ -1.39
LIMD1-204ENST00000474665 DEFB127Q9H1M4 99 aa6.34□□□□□ -1.39
LIMD1-204ENST00000474665 DSN1Q9H410 356 aa6.34□□□□□ -1.39
LIMD1-204ENST00000474665 RAD21L1Q9H4I0 556 aa6.34□□□□□ -1.39
LIMD1-204ENST00000474665 OLAHQ9NV23 265 aa6.34□□□□□ -1.39
LIMD1-204ENST00000474665 GID8Q9NWU2 228 aa6.34□□□□□ -1.39
LIMD1-204ENST00000474665 THUMPD1Q9NXG2 353 aaKnown RBP6.34□□□□□ -1.39
LIMD1-204ENST00000474665 TAS2R1Q9NYW7 299 aa6.34□□□□□ -1.39
LIMD1-204ENST00000474665 CD300AQ9UGN4 299 aa6.34□□□□□ -1.39
LIMD1-204ENST00000474665 NPIPA1Q9UND3 350 aa6.34□□□□□ -1.39
LIMD1-204ENST00000474665 CORO2BQ9UQ03 480 aa6.34□□□□□ -1.39
LIMD1-204ENST00000474665 CARD8Q9Y2G2 431 aa6.34□□□□□ -1.39
LIMD1-204ENST00000474665 GPC6Q9Y625 555 aaPredicted RBP6.34□□□□□ -1.39
LIMD1-204ENST00000474665 ROS1P08922 2347 aa6.33□□□□□ -1.4
LIMD1-204ENST00000474665 A0A0G2JPF8 293 aa6.33□□□□□ -1.4
LIMD1-204ENST00000474665 A0A1B0GVC2 190 aa6.33□□□□□ -1.4
LIMD1-204ENST00000474665 CDHR4A6H8M9 788 aa6.33□□□□□ -1.4
LIMD1-204ENST00000474665 FAM220BPB1ANY3 271 aa6.33□□□□□ -1.4
LIMD1-204ENST00000474665 HNRNPCL2B2RXH8 293 aa6.33□□□□□ -1.4
LIMD1-204ENST00000474665 HNRNPCL3B7ZW38 293 aa6.33□□□□□ -1.4
LIMD1-204ENST00000474665 SHISA8B8ZZ34 492 aa6.33□□□□□ -1.4
LIMD1-204ENST00000474665 M0QX08 132 aa6.33□□□□□ -1.4
LIMD1-204ENST00000474665 ETV2O00321 342 aaPredicted RBP6.33□□□□□ -1.4
LIMD1-204ENST00000474665 SCDO00767 359 aa6.33□□□□□ -1.4
LIMD1-204ENST00000474665 LRRTM2O43300 516 aa6.33□□□□□ -1.4
LIMD1-204ENST00000474665 FRS3O43559 492 aa6.33□□□□□ -1.4
LIMD1-204ENST00000474665 HCRTR2O43614 444 aa6.33□□□□□ -1.4
LIMD1-204ENST00000474665 NDUFB5O43674 189 aa6.33□□□□□ -1.4
LIMD1-204ENST00000474665 EFNA2O43921 213 aa6.33□□□□□ -1.4
LIMD1-204ENST00000474665 GMFGO60234 142 aa6.33□□□□□ -1.4
LIMD1-204ENST00000474665 TPST2O60704 377 aa6.33□□□□□ -1.4
LIMD1-204ENST00000474665 HNRNPCL1O60812 293 aaKnown RBP6.33□□□□□ -1.4
LIMD1-204ENST00000474665 ZG16O60844 167 aa6.33□□□□□ -1.4
LIMD1-204ENST00000474665 PDE9AO76083 593 aa6.33□□□□□ -1.4
LIMD1-204ENST00000474665 MFN2O95140 757 aa6.33□□□□□ -1.4
LIMD1-204ENST00000474665 NTN1O95631 604 aa6.33□□□□□ -1.4
LIMD1-204ENST00000474665 CRYABP02511 175 aaKnown RBP6.33□□□□□ -1.4
LIMD1-204ENST00000474665 HPNP05981 417 aa6.33□□□□□ -1.4
LIMD1-204ENST00000474665 LINGO3P0C6S8 592 aa6.33□□□□□ -1.4
LIMD1-204ENST00000474665 HNRNPCL4P0DMR1 293 aa6.33□□□□□ -1.4
LIMD1-204ENST00000474665 ESRRAP11474 423 aaPredicted RBP6.33□□□□□ -1.4
LIMD1-204ENST00000474665 NID1P14543 1247 aa6.33□□□□□ -1.4
LIMD1-204ENST00000474665 ETS2P15036 469 aa6.33□□□□□ -1.4
LIMD1-204ENST00000474665 IL11P20809 199 aa6.33□□□□□ -1.4
LIMD1-204ENST00000474665 CD247P20963 164 aa6.33□□□□□ -1.4
LIMD1-204ENST00000474665 PSMA4P25789 261 aaKnown RBP6.33□□□□□ -1.4
LIMD1-204ENST00000474665 MSX2P35548 267 aaPredicted RBP6.33□□□□□ -1.4
LIMD1-204ENST00000474665 ACAA2P42765 397 aaKnown RBP6.33□□□□□ -1.4
LIMD1-204ENST00000474665 MASP1P48740 699 aa6.33□□□□□ -1.4
LIMD1-204ENST00000474665 ANXA11P50995 505 aaKnown RBP6.33□□□□□ -1.4
LIMD1-204ENST00000474665 ZNF136P52737 540 aa6.33□□□□□ -1.4
LIMD1-204ENST00000474665 CRISP3P54108 245 aa6.33□□□□□ -1.4
LIMD1-204ENST00000474665 EEFSECP57772 596 aaKnown RBP6.33□□□□□ -1.4
LIMD1-204ENST00000474665 RPP38P78345 283 aaKnown RBP6.33□□□□□ -1.4
LIMD1-204ENST00000474665 KCNJ10P78508 379 aa6.33□□□□□ -1.4
LIMD1-204ENST00000474665 ALDH6A1Q02252 535 aaKnown RBP6.33□□□□□ -1.4
LIMD1-204ENST00000474665 RBBP4Q09028 425 aa6.33□□□□□ -1.4
LIMD1-204ENST00000474665 C17orf67Q0P5P2 114 aa6.33□□□□□ -1.4
LIMD1-204ENST00000474665 BNIP1Q12981 228 aa6.33□□□□□ -1.4
LIMD1-204ENST00000474665 DUSP7Q16829 419 aa6.33□□□□□ -1.4
LIMD1-204ENST00000474665 EMC4Q5J8M3 183 aa6.33□□□□□ -1.4
LIMD1-204ENST00000474665 WIPI1Q5MNZ9 446 aaPredicted RBP6.33□□□□□ -1.4
LIMD1-204ENST00000474665 DCST1Q5T197 706 aa6.33□□□□□ -1.4
LIMD1-204ENST00000474665 MRPL2Q5T653 305 aaKnown RBP6.33□□□□□ -1.4
LIMD1-204ENST00000474665 FAM180AQ6UWF9 173 aa6.33□□□□□ -1.4
LIMD1-204ENST00000474665 BNC2Q6ZN30 1099 aaPredicted RBP6.33□□□□□ -1.4
LIMD1-204ENST00000474665 CCDC80Q76M96 950 aa6.33□□□□□ -1.4
LIMD1-204ENST00000474665 TRILQ7L0X0 811 aa6.33□□□□□ -1.4
LIMD1-204ENST00000474665 CXXC5Q7LFL8 322 aaKnown RBP6.33□□□□□ -1.4
LIMD1-204ENST00000474665 MTERF4Q7Z6M4 381 aaKnown RBP6.33□□□□□ -1.4
LIMD1-204ENST00000474665 YRDCQ86U90 279 aaKnown RBP6.33□□□□□ -1.4
LIMD1-204ENST00000474665 SLC22A16Q86VW1 577 aa6.33□□□□□ -1.4
LIMD1-204ENST00000474665 TSPYL5Q86VY4 417 aaPredicted RBP6.33□□□□□ -1.4
LIMD1-204ENST00000474665 MICU2Q8IYU8 434 aa6.33□□□□□ -1.4
LIMD1-204ENST00000474665 DEFB107AQ8IZN7 70 aa6.33□□□□□ -1.4
LIMD1-204ENST00000474665 ZNF295-AS1Q8N0V1 137 aa6.33□□□□□ -1.4
LIMD1-204ENST00000474665 PGAM4Q8N0Y7 254 aa6.33□□□□□ -1.4
LIMD1-204ENST00000474665 FAM109AQ8N4B1 249 aa6.33□□□□□ -1.4
LIMD1-204ENST00000474665 METTL25Q8N6Q8 603 aa6.33□□□□□ -1.4
LIMD1-204ENST00000474665 RNF148Q8N7C7 305 aa6.33□□□□□ -1.4
LIMD1-204ENST00000474665 ZNF614Q8N883 585 aa6.33□□□□□ -1.4
LIMD1-204ENST00000474665 HIPK4Q8NE63 616 aa6.33□□□□□ -1.4
LIMD1-204ENST00000474665 FAM83FQ8NEG4 500 aaPredicted RBP6.33□□□□□ -1.4
LIMD1-204ENST00000474665 GPR32P1Q8NGA4 272 aa6.33□□□□□ -1.4
LIMD1-204ENST00000474665 OR1J4Q8NGS1 313 aa6.33□□□□□ -1.4
LIMD1-204ENST00000474665 OR52P1PQ8NH57 321 aa6.33□□□□□ -1.4
LIMD1-204ENST00000474665 BBS10Q8TAM1 723 aa6.33□□□□□ -1.4
LIMD1-204ENST00000474665 POC1BQ8TC44 478 aa6.33□□□□□ -1.4
LIMD1-204ENST00000474665 PHOSPHO1Q8TCT1 267 aa6.33□□□□□ -1.4
LIMD1-204ENST00000474665 GPR119Q8TDV5 335 aa6.33□□□□□ -1.4
LIMD1-204ENST00000474665 PMM1Q92871 262 aa6.33□□□□□ -1.4
LIMD1-204ENST00000474665 C1GALT1C1Q96EU7 318 aa6.33□□□□□ -1.4
LIMD1-204ENST00000474665 SH3YL1Q96HL8 342 aaPredicted RBP6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms