RNA–Protein interactions for RNA: ENST00000473854.5

CCDC39-203, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 487 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-203ENST00000473854 ITIH4Q14624 930 aa1.26□□□□□ -2.21
CCDC39-203ENST00000473854 ESPL1Q14674 2120 aa1.26□□□□□ -2.21
CCDC39-203ENST00000473854 PTPRCAPQ14761 206 aa1.26□□□□□ -2.21
CCDC39-203ENST00000473854 POU6F1Q14863 301 aa1.26□□□□□ -2.21
CCDC39-203ENST00000473854 PDK1Q15118 436 aa1.26□□□□□ -2.21
CCDC39-203ENST00000473854 PARP6Q2NL67 630 aa1.26□□□□□ -2.21
CCDC39-203ENST00000473854 ITPRIPL2Q3MIP1 535 aa1.26□□□□□ -2.21
CCDC39-203ENST00000473854 ANKRD20A4Q4UJ75 823 aa1.26□□□□□ -2.21
CCDC39-203ENST00000473854 FAM98BQ52LJ0 330 aaKnown RBP1.26□□□□□ -2.21
CCDC39-203ENST00000473854 LACTB2Q53H82 288 aaPredicted RBP1.26□□□□□ -2.21
CCDC39-203ENST00000473854 HSP90AA5PQ58FG0 334 aa1.26□□□□□ -2.21
CCDC39-203ENST00000473854 IGSF11Q5DX21 431 aa1.26□□□□□ -2.21
CCDC39-203ENST00000473854 TCEAL5Q5H9L2 206 aa1.26□□□□□ -2.21
CCDC39-203ENST00000473854 SPANXN3Q5MJ09 141 aa1.26□□□□□ -2.21
CCDC39-203ENST00000473854 RABGAP1LQ5R372 815 aa1.26□□□□□ -2.21
CCDC39-203ENST00000473854 C10orf120Q5SQS8 335 aa1.26□□□□□ -2.21
CCDC39-203ENST00000473854 PLEKHS1Q5SXH7 462 aa1.26□□□□□ -2.21
CCDC39-203ENST00000473854 N4BP2L1Q5TBK1 243 aaPredicted RBP1.26□□□□□ -2.21
CCDC39-203ENST00000473854 CASC4Q6P4E1 433 aa1.26□□□□□ -2.21
CCDC39-203ENST00000473854 CFAP161Q6P656 301 aa1.26□□□□□ -2.21
CCDC39-203ENST00000473854 RFWD3Q6PCD5 774 aa1.26□□□□□ -2.21
CCDC39-203ENST00000473854 ZCCHC12Q6PEW1 402 aa1.26□□□□□ -2.21
CCDC39-203ENST00000473854 PPP1R21Q6ZMI0 780 aa1.26□□□□□ -2.21
CCDC39-203ENST00000473854 CYHR1Q6ZMK1 362 aa1.26□□□□□ -2.21
CCDC39-203ENST00000473854 C3orf62Q6ZUJ4 267 aa1.26□□□□□ -2.21
CCDC39-203ENST00000473854 ASRGL1Q7L266 308 aa1.26□□□□□ -2.21
CCDC39-203ENST00000473854 NLRP9Q7RTR0 991 aa1.26□□□□□ -2.21
CCDC39-203ENST00000473854 TRPM8Q7Z2W7 1104 aa1.26□□□□□ -2.21
CCDC39-203ENST00000473854 ANKRD33Q7Z3H0 272 aa1.26□□□□□ -2.21
CCDC39-203ENST00000473854 SPATA21Q7Z572 469 aa1.26□□□□□ -2.21
CCDC39-203ENST00000473854 LDB1Q86U70 411 aaPredicted RBP1.26□□□□□ -2.21
CCDC39-203ENST00000473854 TMEM135Q86UB9 458 aa1.26□□□□□ -2.21
CCDC39-203ENST00000473854 SLC26A11Q86WA9 606 aa1.26□□□□□ -2.21
CCDC39-203ENST00000473854 LRRC6Q86X45 466 aa1.26□□□□□ -2.21
CCDC39-203ENST00000473854 METTL23Q86XA0 190 aa1.26□□□□□ -2.21
CCDC39-203ENST00000473854 CATSPERDQ86XM0 798 aa1.26□□□□□ -2.21
CCDC39-203ENST00000473854 C10orf107Q8IVU9 208 aa1.26□□□□□ -2.21
CCDC39-203ENST00000473854 CNTN4Q8IWV2 1026 aa1.26□□□□□ -2.21
CCDC39-203ENST00000473854 CTAGE3PQ8IX95 158 aa1.26□□□□□ -2.21
CCDC39-203ENST00000473854 C10orf67Q8IYJ2 551 aa1.26□□□□□ -2.21
CCDC39-203ENST00000473854 CNPY4Q8N129 248 aa1.26□□□□□ -2.21
CCDC39-203ENST00000473854 PDIK1LQ8N165 341 aa1.26□□□□□ -2.21
CCDC39-203ENST00000473854 THEM5Q8N1Q8 247 aa1.26□□□□□ -2.21
CCDC39-203ENST00000473854 UMODL1-AS1Q8N2C9 162 aa1.26□□□□□ -2.21
CCDC39-203ENST00000473854 KIF2BQ8N4N8 673 aa1.26□□□□□ -2.21
CCDC39-203ENST00000473854 TEX26Q8N6G2 289 aa1.26□□□□□ -2.21
CCDC39-203ENST00000473854 ARFGAP2Q8N6H7 521 aa1.26□□□□□ -2.21
CCDC39-203ENST00000473854 ZNF781Q8N8C0 355 aa1.26□□□□□ -2.21
CCDC39-203ENST00000473854 CCDC197Q8NCU1 140 aa1.26□□□□□ -2.21
CCDC39-203ENST00000473854 CCNYQ8ND76 341 aa1.26□□□□□ -2.21
CCDC39-203ENST00000473854 IPMKQ8NFU5 416 aa1.26□□□□□ -2.21
CCDC39-203ENST00000473854 OR13C4Q8NGS5 318 aa1.26□□□□□ -2.21
CCDC39-203ENST00000473854 OR13C3Q8NGS6 347 aa1.26□□□□□ -2.21
CCDC39-203ENST00000473854 C11orf45Q8TAV5 145 aa1.26□□□□□ -2.21
CCDC39-203ENST00000473854 SPPL2BQ8TCT7 592 aa1.26□□□□□ -2.21
CCDC39-203ENST00000473854 LKAAEAR1Q8TD35 194 aa1.26□□□□□ -2.21
CCDC39-203ENST00000473854 NAT14Q8WUY8 206 aa1.26□□□□□ -2.21
CCDC39-203ENST00000473854 KCTD4Q8WVF5 259 aa1.26□□□□□ -2.21
CCDC39-203ENST00000473854 DYDC1Q8WWB3 177 aa1.26□□□□□ -2.21
CCDC39-203ENST00000473854 ZNF75CPQ92670 426 aaPredicted RBP1.26□□□□□ -2.21
CCDC39-203ENST00000473854 PSMG2Q969U7 264 aa1.26□□□□□ -2.21
CCDC39-203ENST00000473854 SLC22A18Q96BI1 424 aa1.26□□□□□ -2.21
CCDC39-203ENST00000473854 TADA1Q96BN2 335 aa1.26□□□□□ -2.21
CCDC39-203ENST00000473854 LRRC39Q96DD0 335 aa1.26□□□□□ -2.21
CCDC39-203ENST00000473854 ERP27Q96DN0 273 aa1.26□□□□□ -2.21
CCDC39-203ENST00000473854 IMP4Q96G21 291 aaKnown RBP1.26□□□□□ -2.21
CCDC39-203ENST00000473854 RSRC1Q96IZ7 334 aaKnown RBP1.26□□□□□ -2.21
CCDC39-203ENST00000473854 VPS39Q96JC1 886 aa1.26□□□□□ -2.21
CCDC39-203ENST00000473854 DNAJC1Q96KC8 554 aaKnown RBP1.26□□□□□ -2.21
CCDC39-203ENST00000473854 TSGA13Q96PP4 275 aa1.26□□□□□ -2.21
CCDC39-203ENST00000473854 TMEM237Q96Q45 408 aa1.26□□□□□ -2.21
CCDC39-203ENST00000473854 OR6C1Q96RD1 312 aa1.26□□□□□ -2.21
CCDC39-203ENST00000473854 CDRT15Q96T59 188 aa1.26□□□□□ -2.21
CCDC39-203ENST00000473854 CYTH2Q99418 400 aa1.26□□□□□ -2.21
CCDC39-203ENST00000473854 NDNQ99608 321 aa1.26□□□□□ -2.21
CCDC39-203ENST00000473854 GPR22Q99680 433 aa1.26□□□□□ -2.21
CCDC39-203ENST00000473854 OLFM1Q99784 485 aa1.26□□□□□ -2.21
CCDC39-203ENST00000473854 CPNE1Q99829 537 aa1.26□□□□□ -2.21
CCDC39-203ENST00000473854 PAIP2Q9BPZ3 127 aaKnown RBP1.26□□□□□ -2.21
CCDC39-203ENST00000473854 TBL1YQ9BQ87 522 aa1.26□□□□□ -2.21
CCDC39-203ENST00000473854 CENPOQ9BU64 300 aa1.26□□□□□ -2.21
CCDC39-203ENST00000473854 KIFC1Q9BW19 673 aa1.26□□□□□ -2.21
CCDC39-203ENST00000473854 SCRT1Q9BWW7 348 aa1.26□□□□□ -2.21
CCDC39-203ENST00000473854 MRPL9Q9BYD2 267 aaKnown RBP1.26□□□□□ -2.21
CCDC39-203ENST00000473854 ZYG11BQ9C0D3 744 aa1.26□□□□□ -2.21
CCDC39-203ENST00000473854 NMUR2Q9GZQ4 415 aa1.26□□□□□ -2.21
CCDC39-203ENST00000473854 NSRP1Q9H0G5 558 aaKnown RBP1.26□□□□□ -2.21
CCDC39-203ENST00000473854 TSPYL1Q9H0U9 437 aa1.26□□□□□ -2.21
CCDC39-203ENST00000473854 STMN4Q9H169 189 aaPredicted RBP1.26□□□□□ -2.21
CCDC39-203ENST00000473854 ZBP1Q9H171 429 aa1.26□□□□□ -2.21
CCDC39-203ENST00000473854 SLC25A51Q9H1U9 297 aa1.26□□□□□ -2.21
CCDC39-203ENST00000473854 RHOJQ9H4E5 214 aa1.26□□□□□ -2.21
CCDC39-203ENST00000473854 LRRC40Q9H9A6 602 aa1.26□□□□□ -2.21
CCDC39-203ENST00000473854 KCNK13Q9HB14 408 aa1.26□□□□□ -2.21
CCDC39-203ENST00000473854 MRM3Q9HC36 420 aaKnown RBP1.26□□□□□ -2.21
CCDC39-203ENST00000473854 CHMP1AQ9HD42 196 aaPredicted RBP1.26□□□□□ -2.21
CCDC39-203ENST00000473854 PDE7BQ9NP56 450 aa1.26□□□□□ -2.21
CCDC39-203ENST00000473854 SLC40A1Q9NP59 571 aa1.26□□□□□ -2.21
CCDC39-203ENST00000473854 NT5MQ9NPB1 228 aa1.26□□□□□ -2.21
CCDC39-203ENST00000473854 SERINC1Q9NRX5 453 aa1.26□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 86.5 ms