RNA–Protein interactions for RNA: ENST00000472892.1

VTI1A-203, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best)

Gene VTI1A, Length 1,247 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-203ENST00000472892 THBDP07204 575 aa13.66□□□□□ -0.22
VTI1A-203ENST00000472892 PABPC4LP0CB38 370 aaKnown RBP13.66□□□□□ -0.22
VTI1A-203ENST00000472892 NPIPA8P0DM63 369 aa13.66□□□□□ -0.22
VTI1A-203ENST00000472892 SHC1P29353 583 aa13.66□□□□□ -0.22
VTI1A-203ENST00000472892 FOXF1Q12946 379 aa13.66□□□□□ -0.22
VTI1A-203ENST00000472892 ACKR1Q16570 336 aa13.66□□□□□ -0.22
VTI1A-203ENST00000472892 SHEQ5VZ18 495 aa13.66□□□□□ -0.22
VTI1A-203ENST00000472892 STAC2Q6ZMT1 411 aa13.66□□□□□ -0.22
VTI1A-203ENST00000472892 LRRC75A-AS1Q8N1F1 130 aa13.66□□□□□ -0.22
VTI1A-203ENST00000472892 FBXO27Q8NI29 283 aa13.66□□□□□ -0.22
VTI1A-203ENST00000472892 PKNOX2Q96KN3 472 aa13.66□□□□□ -0.22
VTI1A-203ENST00000472892 AKTIPQ9H8T0 292 aa13.66□□□□□ -0.22
VTI1A-203ENST00000472892 SSU72Q9NP77 194 aaKnown RBP13.66□□□□□ -0.22
VTI1A-203ENST00000472892 GPC6Q9Y625 555 aaPredicted RBP13.66□□□□□ -0.22
VTI1A-203ENST00000472892 NIPBLQ6KC79 2804 aaeCLIP13.65□□□□□ -0.22
VTI1A-203ENST00000472892 WDR91A4D1P6 747 aa13.65□□□□□ -0.22
VTI1A-203ENST00000472892 DUXAA6NLW8 204 aa13.65□□□□□ -0.22
VTI1A-203ENST00000472892 GJE1A6NN92 205 aa13.65□□□□□ -0.22
VTI1A-203ENST00000472892 GTPBP1O00178 669 aaKnown RBP13.65□□□□□ -0.22
VTI1A-203ENST00000472892 KLF4O43474 513 aa13.65□□□□□ -0.22
VTI1A-203ENST00000472892 NTN1O95631 604 aa13.65□□□□□ -0.22
VTI1A-203ENST00000472892 SERPINE1P05121 402 aa13.65□□□□□ -0.22
VTI1A-203ENST00000472892 TUBBP07437 444 aa13.65□□□□□ -0.22
VTI1A-203ENST00000472892 HOXB4P17483 251 aaPredicted RBP13.65□□□□□ -0.22
VTI1A-203ENST00000472892 FPR1P21462 350 aa13.65□□□□□ -0.22
VTI1A-203ENST00000472892 MATN1P21941 496 aa13.65□□□□□ -0.22
VTI1A-203ENST00000472892 SFTPDP35247 375 aa13.65□□□□□ -0.22
VTI1A-203ENST00000472892 RNF144AP50876 292 aaPredicted RBP13.65□□□□□ -0.22
VTI1A-203ENST00000472892 ABCE1P61221 599 aaKnown RBP13.65□□□□□ -0.22
VTI1A-203ENST00000472892 ZNF844Q08AG5 666 aa13.65□□□□□ -0.22
VTI1A-203ENST00000472892 TOMM34Q15785 309 aaPredicted RBP13.65□□□□□ -0.22
VTI1A-203ENST00000472892 PGS1Q32NB8 556 aa13.65□□□□□ -0.22
VTI1A-203ENST00000472892 SLC25A53Q5H9E4 307 aa13.65□□□□□ -0.22
VTI1A-203ENST00000472892 BEND4Q6ZU67 534 aa13.65□□□□□ -0.22
VTI1A-203ENST00000472892 C6orf120Q7Z4R8 191 aa13.65□□□□□ -0.22
VTI1A-203ENST00000472892 ZNF781Q8N8C0 355 aa13.65□□□□□ -0.22
VTI1A-203ENST00000472892 OR8J2Q8NGG1 315 aa13.65□□□□□ -0.22
VTI1A-203ENST00000472892 OR5D16Q8NGK9 328 aa13.65□□□□□ -0.22
VTI1A-203ENST00000472892 OR5AK3PQ8NH89 298 aa13.65□□□□□ -0.22
VTI1A-203ENST00000472892 PPP1R14CQ8TAE6 165 aa13.65□□□□□ -0.22
VTI1A-203ENST00000472892 RNF128Q8TEB7 428 aa13.65□□□□□ -0.22
VTI1A-203ENST00000472892 ROBO4Q8WZ75 1007 aa13.65□□□□□ -0.22
VTI1A-203ENST00000472892 CPNE4Q96A23 557 aaPredicted RBP13.65□□□□□ -0.22
VTI1A-203ENST00000472892 ZNF524Q96C55 264 aa13.65□□□□□ -0.22
VTI1A-203ENST00000472892 ARSGQ96EG1 525 aa13.65□□□□□ -0.22
VTI1A-203ENST00000472892 MRGPRX4Q96LA9 322 aa13.65□□□□□ -0.22
VTI1A-203ENST00000472892 C20orf27Q9GZN8 174 aa13.65□□□□□ -0.22
VTI1A-203ENST00000472892 NMUR2Q9GZQ4 415 aa13.65□□□□□ -0.22
VTI1A-203ENST00000472892 OR10A4Q9H209 315 aa13.65□□□□□ -0.22
VTI1A-203ENST00000472892 SERHL2Q9H4I8 314 aa13.65□□□□□ -0.22
VTI1A-203ENST00000472892 FANCFQ9NPI8 374 aa13.65□□□□□ -0.22
VTI1A-203ENST00000472892 TIGARQ9NQ88 270 aa13.65□□□□□ -0.22
VTI1A-203ENST00000472892 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.65□□□□□ -0.22
VTI1A-203ENST00000472892 GPR52Q9Y2T5 361 aa13.65□□□□□ -0.22
VTI1A-203ENST00000472892 FLNAP21333 2647 aaKnown RBP13.64□□□□□ -0.23
VTI1A-203ENST00000472892 UQCRHLA0A096LP55 91 aa13.64□□□□□ -0.23
VTI1A-203ENST00000472892 ESPNB1AK53 854 aa13.64□□□□□ -0.23
VTI1A-203ENST00000472892 ETV2O00321 342 aaPredicted RBP13.64□□□□□ -0.23
VTI1A-203ENST00000472892 RNASET2O00584 256 aaKnown RBP13.64□□□□□ -0.23
VTI1A-203ENST00000472892 RGS16O15492 202 aaPredicted RBP13.64□□□□□ -0.23
VTI1A-203ENST00000472892 ZNF264O43296 627 aa13.64□□□□□ -0.23
VTI1A-203ENST00000472892 ARHGEF9O43307 516 aa13.64□□□□□ -0.23
VTI1A-203ENST00000472892 EIF4E2O60573 245 aaKnown RBP13.64□□□□□ -0.23
VTI1A-203ENST00000472892 DNAJA2O60884 412 aa13.64□□□□□ -0.23
VTI1A-203ENST00000472892 SCN2BO60939 215 aa13.64□□□□□ -0.23
VTI1A-203ENST00000472892 SNUPNO95149 360 aaKnown RBP13.64□□□□□ -0.23
VTI1A-203ENST00000472892 NUDT14O95848 222 aa13.64□□□□□ -0.23
VTI1A-203ENST00000472892 MYZAPP0CAP1 466 aa13.64□□□□□ -0.23
VTI1A-203ENST00000472892 DHRS4L1P0CG22 281 aa13.64□□□□□ -0.23
VTI1A-203ENST00000472892 PRKCAP17252 672 aa13.64□□□□□ -0.23
VTI1A-203ENST00000472892 AGTR1P30556 359 aa13.64□□□□□ -0.23
VTI1A-203ENST00000472892 RPS26P62854 115 aaKnown RBP13.64□□□□□ -0.23
VTI1A-203ENST00000472892 RNPS1Q15287 305 aaKnown RBP13.64□□□□□ -0.23
VTI1A-203ENST00000472892 CHI3L2Q15782 390 aa13.64□□□□□ -0.23
VTI1A-203ENST00000472892 ZNF141Q15928 474 aa13.64□□□□□ -0.23
VTI1A-203ENST00000472892 ZNF239Q16600 458 aaKnown RBP13.64□□□□□ -0.23
VTI1A-203ENST00000472892 NDUFAF6Q330K2 333 aa13.64□□□□□ -0.23
VTI1A-203ENST00000472892 KRT71Q3SY84 523 aa13.64□□□□□ -0.23
VTI1A-203ENST00000472892 TMEM176BQ3YBM2 270 aaPredicted RBP13.64□□□□□ -0.23
VTI1A-203ENST00000472892 AP1ARQ63HQ0 302 aa13.64□□□□□ -0.23
VTI1A-203ENST00000472892 OR4F3Q6IEY1 312 aa13.64□□□□□ -0.23
VTI1A-203ENST00000472892 C20orf204Q6ZNR8 217 aa13.64□□□□□ -0.23
VTI1A-203ENST00000472892 STK32CQ86UX6 486 aa13.64□□□□□ -0.23
VTI1A-203ENST00000472892 CLECL1Q8IZS7 167 aa13.64□□□□□ -0.23
VTI1A-203ENST00000472892 OR5W2Q8NH69 310 aa13.64□□□□□ -0.23
VTI1A-203ENST00000472892 REXO5Q96IC2 774 aaKnown RBP13.64□□□□□ -0.23
VTI1A-203ENST00000472892 C18orf12Q96KH6 178 aa13.64□□□□□ -0.23
VTI1A-203ENST00000472892 SRXN1Q9BYN0 137 aa13.64□□□□□ -0.23
VTI1A-203ENST00000472892 UBTD1Q9HAC8 227 aa13.64□□□□□ -0.23
VTI1A-203ENST00000472892 GP6Q9HCN6 339 aa13.64□□□□□ -0.23
VTI1A-203ENST00000472892 KCNE5Q9UJ90 142 aa13.64□□□□□ -0.23
VTI1A-203ENST00000472892 RAP2CQ9Y3L5 183 aa13.64□□□□□ -0.23
VTI1A-203ENST00000472892 NUP214P35658 2090 aaPredicted RBP13.63□□□□□ -0.23
VTI1A-203ENST00000472892 SERINC4A6NH21 518 aa13.63□□□□□ -0.23
VTI1A-203ENST00000472892 TM9SF1O15321 606 aa13.63□□□□□ -0.23
VTI1A-203ENST00000472892 FCMRO60667 390 aa13.63□□□□□ -0.23
VTI1A-203ENST00000472892 SMPD2O60906 423 aa13.63□□□□□ -0.23
VTI1A-203ENST00000472892 PRKD3O94806 890 aa13.63□□□□□ -0.23
VTI1A-203ENST00000472892 AK1P00568 194 aa13.63□□□□□ -0.23
VTI1A-203ENST00000472892 GUSBP08236 651 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms