RNA–Protein interactions for RNA: ENST00000472044.1

PTCD3-209, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 293 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-209ENST00000472044 PYHIN1Q6K0P9 492 aa2.75□□□□□ -1.97
PTCD3-209ENST00000472044 CES3Q6UWW8 571 aa2.75□□□□□ -1.97
PTCD3-209ENST00000472044 MOB1BQ7L9L4 216 aa2.75□□□□□ -1.97
PTCD3-209ENST00000472044 VASH2Q86V25 355 aa2.75□□□□□ -1.97
PTCD3-209ENST00000472044 FBXO16Q8IX29 292 aaPredicted RBP2.75□□□□□ -1.97
PTCD3-209ENST00000472044 CLDN19Q8N6F1 224 aa2.75□□□□□ -1.97
PTCD3-209ENST00000472044 DENND6BQ8NEG7 585 aa2.75□□□□□ -1.97
PTCD3-209ENST00000472044 FAM3CQ92520 227 aa2.75□□□□□ -1.97
PTCD3-209ENST00000472044 BADQ92934 168 aa2.75□□□□□ -1.97
PTCD3-209ENST00000472044 FGGYQ96C11 551 aa2.75□□□□□ -1.97
PTCD3-209ENST00000472044 SLC25A38Q96DW6 304 aa2.75□□□□□ -1.97
PTCD3-209ENST00000472044 C7orf34Q96L11 122 aa2.75□□□□□ -1.97
PTCD3-209ENST00000472044 CNOT6LQ96LI5 555 aaKnown RBP2.75□□□□□ -1.97
PTCD3-209ENST00000472044 C12orf66Q96MD2 445 aa2.75□□□□□ -1.97
PTCD3-209ENST00000472044 MCHR1Q99705 422 aa2.75□□□□□ -1.97
PTCD3-209ENST00000472044 ALG12Q9BV10 488 aa2.75□□□□□ -1.97
PTCD3-209ENST00000472044 RAB33BQ9H082 229 aa2.75□□□□□ -1.97
PTCD3-209ENST00000472044 TMEM117Q9H0C3 514 aa2.75□□□□□ -1.97
PTCD3-209ENST00000472044 RMND5AQ9H871 391 aa2.75□□□□□ -1.97
PTCD3-209ENST00000472044 B3GNT2Q9NY97 397 aa2.75□□□□□ -1.97
PTCD3-209ENST00000472044 CGNQ9P2M7 1197 aaKnown RBP2.75□□□□□ -1.97
PTCD3-209ENST00000472044 GNG12Q9UBI6 72 aa2.75□□□□□ -1.97
PTCD3-209ENST00000472044 WDR45Q9Y484 360 aa2.75□□□□□ -1.97
PTCD3-209ENST00000472044 PPIAL4AQ9Y536 164 aa2.75□□□□□ -1.97
PTCD3-209ENST00000472044 KDRP35968 1356 aa2.74□□□□□ -1.97
PTCD3-209ENST00000472044 TNRQ92752 1358 aa2.74□□□□□ -1.97
PTCD3-209ENST00000472044 IGHV2-70DA0A0C4DH43 119 aa2.74□□□□□ -1.97
PTCD3-209ENST00000472044 MBLAC1A4D2B0 266 aaPredicted RBP2.74□□□□□ -1.97
PTCD3-209ENST00000472044 ZFP92A6NM28 416 aa2.74□□□□□ -1.97
PTCD3-209ENST00000472044 ZNF705EA8MWA4 302 aaPredicted RBP2.74□□□□□ -1.97
PTCD3-209ENST00000472044 KLLNB2CW77 178 aa2.74□□□□□ -1.97
PTCD3-209ENST00000472044 H3BMQ9 156 aa2.74□□□□□ -1.97
PTCD3-209ENST00000472044 BTN3A3O00478 584 aa2.74□□□□□ -1.97
PTCD3-209ENST00000472044 XPO1O14980 1071 aaKnown RBP2.74□□□□□ -1.97
PTCD3-209ENST00000472044 UGT2B17O75795 530 aa2.74□□□□□ -1.97
PTCD3-209ENST00000472044 LYPD3O95274 346 aa2.74□□□□□ -1.97
PTCD3-209ENST00000472044 LY6G6DO95868 133 aa2.74□□□□□ -1.97
PTCD3-209ENST00000472044 HSPB1P04792 205 aaKnown RBP2.74□□□□□ -1.97
PTCD3-209ENST00000472044 CYP2B6P20813 491 aa2.74□□□□□ -1.97
PTCD3-209ENST00000472044 HNRNPA2B1P22626 353 aaKnown RBP2.74□□□□□ -1.97
PTCD3-209ENST00000472044 CHI3L1P36222 383 aaPredicted RBP2.74□□□□□ -1.97
PTCD3-209ENST00000472044 HNRNPA3P51991 378 aaKnown RBP2.74□□□□□ -1.97
PTCD3-209ENST00000472044 PDK4Q16654 411 aa2.74□□□□□ -1.97
PTCD3-209ENST00000472044 WSCD1Q658N2 575 aa2.74□□□□□ -1.97
PTCD3-209ENST00000472044 BLOC1S2Q6QNY1 142 aa2.74□□□□□ -1.97
PTCD3-209ENST00000472044 SYT10Q6XYQ8 523 aa2.74□□□□□ -1.97
PTCD3-209ENST00000472044 DNM1P46Q6ZS02 220 aa2.74□□□□□ -1.97
PTCD3-209ENST00000472044 FRA10AC1Q70Z53 315 aa2.74□□□□□ -1.97
PTCD3-209ENST00000472044 TRPM8Q7Z2W7 1104 aa2.74□□□□□ -1.97
PTCD3-209ENST00000472044 C16orf62Q7Z3J2 963 aa2.74□□□□□ -1.97
PTCD3-209ENST00000472044 PPP1R27Q86WC6 154 aa2.74□□□□□ -1.97
PTCD3-209ENST00000472044 LRRC43Q8N309 656 aa2.74□□□□□ -1.97
PTCD3-209ENST00000472044 PNPT1Q8TCS8 783 aaKnown RBP2.74□□□□□ -1.97
PTCD3-209ENST00000472044 SLC5A11Q8WWX8 675 aa2.74□□□□□ -1.97
PTCD3-209ENST00000472044 CELF6Q96J87 481 aaKnown RBP2.74□□□□□ -1.97
PTCD3-209ENST00000472044 B3GALT6Q96L58 329 aa2.74□□□□□ -1.97
PTCD3-209ENST00000472044 NOL4LQ96MY1 436 aaPredicted RBP2.74□□□□□ -1.97
PTCD3-209ENST00000472044 YTHDF1Q9BYJ9 559 aaKnown RBP2.74□□□□□ -1.97
PTCD3-209ENST00000472044 SRXN1Q9BYN0 137 aa2.74□□□□□ -1.97
PTCD3-209ENST00000472044 CRNKL1Q9BZJ0 848 aaKnown RBP2.74□□□□□ -1.97
PTCD3-209ENST00000472044 EHD1Q9H4M9 534 aa2.74□□□□□ -1.97
PTCD3-209ENST00000472044 PALMDQ9NP74 551 aa2.74□□□□□ -1.97
PTCD3-209ENST00000472044 PAK1IP1Q9NWT1 392 aaPredicted RBP2.74□□□□□ -1.97
PTCD3-209ENST00000472044 ONECUT1Q9UBC0 465 aa2.74□□□□□ -1.97
PTCD3-209ENST00000472044 ANGPTL2Q9UKU9 493 aa2.74□□□□□ -1.97
PTCD3-209ENST00000472044 SCML2Q9UQR0 700 aa2.74□□□□□ -1.97
PTCD3-209ENST00000472044 MRPS7Q9Y2R9 242 aaKnown RBP2.74□□□□□ -1.97
PTCD3-209ENST00000472044 DDX49Q9Y6V7 483 aaKnown RBP2.74□□□□□ -1.97
PTCD3-209ENST00000472044 ZNF318Q5VUA4 2279 aa2.73□□□□□ -1.97
PTCD3-209ENST00000472044 KIF16BQ96L93 1317 aa2.73□□□□□ -1.97
PTCD3-209ENST00000472044 IGHV7-81A0A0B4J1V7 117 aa2.73□□□□□ -1.97
PTCD3-209ENST00000472044 A0A1B0GWB2 263 aa2.73□□□□□ -1.97
PTCD3-209ENST00000472044 A8MU10 97 aa2.73□□□□□ -1.97
PTCD3-209ENST00000472044 TM7SF2O76062 418 aa2.73□□□□□ -1.97
PTCD3-209ENST00000472044 PAX7P23759 505 aa2.73□□□□□ -1.97
PTCD3-209ENST00000472044 RGS4P49798 205 aa2.73□□□□□ -1.97
PTCD3-209ENST00000472044 SLC26A2P50443 739 aa2.73□□□□□ -1.97
PTCD3-209ENST00000472044 MESDQ14696 234 aa2.73□□□□□ -1.97
PTCD3-209ENST00000472044 AANATQ16613 207 aa2.73□□□□□ -1.97
PTCD3-209ENST00000472044 CFAP221Q4G0U5 840 aa2.73□□□□□ -1.97
PTCD3-209ENST00000472044 LIPNQ5VXI9 398 aa2.73□□□□□ -1.97
PTCD3-209ENST00000472044 FAM199XQ6PEV8 388 aaPredicted RBP2.73□□□□□ -1.97
PTCD3-209ENST00000472044 CEND1Q8N111 149 aa2.73□□□□□ -1.97
PTCD3-209ENST00000472044 SYT14Q8NB59 555 aa2.73□□□□□ -1.97
PTCD3-209ENST00000472044 RLN3Q8WXF3 142 aa2.73□□□□□ -1.97
PTCD3-209ENST00000472044 SENP8Q96LD8 212 aa2.73□□□□□ -1.97
PTCD3-209ENST00000472044 CYP2S1Q96SQ9 504 aa2.73□□□□□ -1.97
PTCD3-209ENST00000472044 RIT2Q99578 217 aa2.73□□□□□ -1.97
PTCD3-209ENST00000472044 ZNF184Q99676 751 aaPredicted RBP2.73□□□□□ -1.97
PTCD3-209ENST00000472044 POLR1EQ9GZS1 481 aaKnown RBP2.73□□□□□ -1.97
PTCD3-209ENST00000472044 GLIPR2Q9H4G4 154 aa2.73□□□□□ -1.97
PTCD3-209ENST00000472044 ZNF385DQ9H6B1 395 aa2.73□□□□□ -1.97
PTCD3-209ENST00000472044 ELOVL3Q9HB03 270 aa2.73□□□□□ -1.97
PTCD3-209ENST00000472044 TBK1Q9UHD2 729 aa2.73□□□□□ -1.97
PTCD3-209ENST00000472044 XPO7Q9UIA9 1087 aaKnown RBP2.73□□□□□ -1.97
PTCD3-209ENST00000472044 RASD1Q9Y272 281 aa2.73□□□□□ -1.97
PTCD3-209ENST00000472044 ATRXP46100 2492 aa2.73□□□□□ -1.97
PTCD3-209ENST00000472044 IGHV1OR15-1A0A075B7D0 117 aa2.72□□□□□ -1.97
PTCD3-209ENST00000472044 SULT2B1O00204 365 aa2.72□□□□□ -1.97
PTCD3-209ENST00000472044 HAT1O14929 419 aa2.72□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms