RNA–Protein interactions for RNA: ENST00000471694.1

CD47-204, Transcript of CD47 molecule, humanhuman

TSL 1 (best)

Gene CD47, Length 6,796 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-204ENST00000471694 UCNP55089 124 aa8.04□□□□□ -1.12
CD47-204ENST00000471694 CDKN2DP55273 166 aa8.04□□□□□ -1.12
CD47-204ENST00000471694 BIDP55957 195 aa8.04□□□□□ -1.12
CD47-204ENST00000471694 NFATC3Q12968 1075 aa8.04□□□□□ -1.12
CD47-204ENST00000471694 OR5AS1Q8N127 324 aa8.04□□□□□ -1.12
CD47-204ENST00000471694 PQLC3Q8N755 202 aa8.04□□□□□ -1.12
CD47-204ENST00000471694 ZBTB8BQ8NAP8 495 aaPredicted RBP8.04□□□□□ -1.12
CD47-204ENST00000471694 CSNK2A3Q8NEV1 391 aa8.04□□□□□ -1.12
CD47-204ENST00000471694 ATF6BQ99941 703 aa8.04□□□□□ -1.12
CD47-204ENST00000471694 NUDT15Q9NV35 164 aa8.04□□□□□ -1.12
CD47-204ENST00000471694 MARCH5Q9NX47 278 aa8.04□□□□□ -1.12
CD47-204ENST00000471694 REXO2Q9Y3B8 237 aaKnown RBP8.04□□□□□ -1.12
CD47-204ENST00000471694 FUT1P19526 365 aa8.04□□□□□ -1.12
CD47-204ENST00000471694 RGRP47804 291 aa8.04□□□□□ -1.12
CD47-204ENST00000471694 CCR5P51681 352 aa8.04□□□□□ -1.12
CD47-204ENST00000471694 SMIM15Q7Z3B0 74 aa8.04□□□□□ -1.12
CD47-204ENST00000471694 VTCN1Q7Z7D3 282 aa8.04□□□□□ -1.12
CD47-204ENST00000471694 OR5AK2Q8NH90 309 aa8.04□□□□□ -1.12
CD47-204ENST00000471694 C10orf82Q8WW14 230 aa8.04□□□□□ -1.12
CD47-204ENST00000471694 SLC12A9Q9BXP2 914 aa8.04□□□□□ -1.12
CD47-204ENST00000471694 C14orf119Q9NWQ9 140 aa8.04□□□□□ -1.12
CD47-204ENST00000471694 MGAT4CQ9UBM8 478 aa8.04□□□□□ -1.12
CD47-204ENST00000471694 RHBDD3Q9Y3P4 386 aa8.04□□□□□ -1.12
CD47-204ENST00000471694 SASH3O75995 380 aa8.04□□□□□ -1.12
CD47-204ENST00000471694 C1orf105O95561 183 aa8.04□□□□□ -1.12
CD47-204ENST00000471694 HLA-DPB1P04440 258 aa8.04□□□□□ -1.12
CD47-204ENST00000471694 PET100P0DJ07 73 aa8.04□□□□□ -1.12
CD47-204ENST00000471694 SELEP16581 610 aa8.04□□□□□ -1.12
CD47-204ENST00000471694 KEAP1Q14145 624 aa8.04□□□□□ -1.12
CD47-204ENST00000471694 ARHGAP19Q14CB8 494 aa8.04□□□□□ -1.12
CD47-204ENST00000471694 OR8G1Q15617 311 aa8.04□□□□□ -1.12
CD47-204ENST00000471694 LRP10Q7Z4F1 713 aa8.04□□□□□ -1.12
CD47-204ENST00000471694 CPNE8Q86YQ8 564 aa8.04□□□□□ -1.12
CD47-204ENST00000471694 OR5T1Q8NG75 326 aa8.04□□□□□ -1.12
CD47-204ENST00000471694 TAAR8Q969N4 342 aa8.04□□□□□ -1.12
CD47-204ENST00000471694 ST6GALNAC5Q9BVH7 336 aa8.04□□□□□ -1.12
CD47-204ENST00000471694 GCM1Q9NP62 436 aa8.04□□□□□ -1.12
CD47-204ENST00000471694 CARD8Q9Y2G2 431 aa8.04□□□□□ -1.12
CD47-204ENST00000471694 PCDHGB6Q9Y5F9 930 aa8.04□□□□□ -1.12
CD47-204ENST00000471694 SMIM30A4D0T7 59 aa8.03□□□□□ -1.12
CD47-204ENST00000471694 CDX4O14627 284 aaPredicted RBP8.03□□□□□ -1.12
CD47-204ENST00000471694 TNFSF14O43557 240 aa8.03□□□□□ -1.12
CD47-204ENST00000471694 SLC2A2P11168 524 aaPredicted RBP8.03□□□□□ -1.12
CD47-204ENST00000471694 HNRNPH3P31942 346 aaKnown RBP8.03□□□□□ -1.12
CD47-204ENST00000471694 EIF3IQ13347 325 aaKnown RBP8.03□□□□□ -1.12
CD47-204ENST00000471694 ZNF813Q6ZN06 617 aa8.03□□□□□ -1.12
CD47-204ENST00000471694 TMEM173Q86WV6 379 aaPredicted RBP8.03□□□□□ -1.12
CD47-204ENST00000471694 SLC35F2Q8IXU6 374 aa8.03□□□□□ -1.12
CD47-204ENST00000471694 CMTM4Q8IZR5 234 aa8.03□□□□□ -1.12
CD47-204ENST00000471694 OR10X1Q8NGY0 326 aa8.03□□□□□ -1.12
CD47-204ENST00000471694 OR1S1Q8NH92 325 aa8.03□□□□□ -1.12
CD47-204ENST00000471694 ABHD4Q8TB40 342 aa8.03□□□□□ -1.12
CD47-204ENST00000471694 NSUN5Q96P11 429 aaKnown RBP8.03□□□□□ -1.12
CD47-204ENST00000471694 A0A096LPI6 279 aa8.03□□□□□ -1.12
CD47-204ENST00000471694 OR5H15A6NDH6 313 aa8.03□□□□□ -1.12
CD47-204ENST00000471694 OR5H14A6NHG9 310 aa8.03□□□□□ -1.12
CD47-204ENST00000471694 OR5H1A6NKK0 313 aa8.03□□□□□ -1.12
CD47-204ENST00000471694 FAM159BA6NKW6 160 aa8.03□□□□□ -1.12
CD47-204ENST00000471694 SOBPA7XYQ1 873 aa8.03□□□□□ -1.12
CD47-204ENST00000471694 CEBPZOSA8MTT3 80 aa8.03□□□□□ -1.12
CD47-204ENST00000471694 KDM4EB2RXH2 506 aaPredicted RBP8.03□□□□□ -1.12
CD47-204ENST00000471694 M0R036 132 aa8.03□□□□□ -1.12
CD47-204ENST00000471694 PPIHO43447 177 aaKnown RBP8.03□□□□□ -1.12
CD47-204ENST00000471694 ORC5O43913 435 aa8.03□□□□□ -1.12
CD47-204ENST00000471694 SSX5O60225 188 aa8.03□□□□□ -1.12
CD47-204ENST00000471694 CRYZL1O95825 349 aa8.03□□□□□ -1.12
CD47-204ENST00000471694 STSP08842 583 aa8.03□□□□□ -1.12
CD47-204ENST00000471694 HOXD8P13378 290 aaPredicted RBP8.03□□□□□ -1.12
CD47-204ENST00000471694 GSTT1P30711 240 aa8.03□□□□□ -1.12
CD47-204ENST00000471694 PTGER1P34995 402 aa8.03□□□□□ -1.12
CD47-204ENST00000471694 LSSP48449 732 aa8.03□□□□□ -1.12
CD47-204ENST00000471694 TRAM1Q15629 374 aa8.03□□□□□ -1.12
CD47-204ENST00000471694 ZNF766Q5HY98 468 aa8.03□□□□□ -1.12
CD47-204ENST00000471694 LRRN1Q6UXK5 716 aa8.03□□□□□ -1.12
CD47-204ENST00000471694 PEX13Q92968 403 aa8.03□□□□□ -1.12
CD47-204ENST00000471694 FKBP10Q96AY3 582 aa8.03□□□□□ -1.12
CD47-204ENST00000471694 SLC6A20Q9NP91 592 aa8.03□□□□□ -1.12
CD47-204ENST00000471694 TUSC2O75896 110 aa8.03□□□□□ -1.12
CD47-204ENST00000471694 APOL3O95236 402 aa8.03□□□□□ -1.12
CD47-204ENST00000471694 CRYAAP02489 173 aa8.03□□□□□ -1.12
CD47-204ENST00000471694 CPMP14384 443 aa8.03□□□□□ -1.12
CD47-204ENST00000471694 GLB1P16278 677 aa8.03□□□□□ -1.12
CD47-204ENST00000471694 GSK3AP49840 483 aa8.03□□□□□ -1.12
CD47-204ENST00000471694 CTSCP53634 463 aa8.03□□□□□ -1.12
CD47-204ENST00000471694 PSMA6P60900 246 aaKnown RBP8.03□□□□□ -1.12
CD47-204ENST00000471694 ACSM3Q53FZ2 586 aa8.03□□□□□ -1.12
CD47-204ENST00000471694 RBMXL3Q8N7X1 1067 aaKnown RBP8.03□□□□□ -1.12
CD47-204ENST00000471694 ZFP90Q8TF47 636 aa8.03□□□□□ -1.12
CD47-204ENST00000471694 HSD17B8Q92506 261 aa8.03□□□□□ -1.12
CD47-204ENST00000471694 ITFG2Q969R8 447 aa8.03□□□□□ -1.12
CD47-204ENST00000471694 PDXPQ96GD0 296 aa8.03□□□□□ -1.12
CD47-204ENST00000471694 SYT3Q9BQG1 590 aa8.03□□□□□ -1.12
CD47-204ENST00000471694 TMEM59Q9BXS4 323 aa8.03□□□□□ -1.12
CD47-204ENST00000471694 DPH1Q9BZG8 443 aa8.03□□□□□ -1.12
CD47-204ENST00000471694 IL26Q9NPH9 171 aa8.03□□□□□ -1.12
CD47-204ENST00000471694 OLAHQ9NV23 265 aa8.03□□□□□ -1.12
CD47-204ENST00000471694 USP36Q9P275 1121 aaKnown RBP8.03□□□□□ -1.12
CD47-204ENST00000471694 MARCH4Q9P2E8 410 aaPredicted RBP8.03□□□□□ -1.12
CD47-204ENST00000471694 DKK3Q9UBP4 350 aa8.03□□□□□ -1.12
CD47-204ENST00000471694 PEX16Q9Y5Y5 336 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms