RNA–Protein interactions for RNA: ENST00000470076.1

COL7A1-208, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 651 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-208ENST00000470076 OR2W6PQ8NHA6 318 aa15.6■□□□□ 0.09
COL7A1-208ENST00000470076 SFXN5Q8TD22 340 aa15.6■□□□□ 0.09
COL7A1-208ENST00000470076 TMEM171Q8WVE6 324 aa15.6■□□□□ 0.09
COL7A1-208ENST00000470076 IGFBPL1Q8WX77 278 aa15.6■□□□□ 0.09
COL7A1-208ENST00000470076 ROBO4Q8WZ75 1007 aa15.6■□□□□ 0.09
COL7A1-208ENST00000470076 MOAP1Q96BY2 351 aa15.6■□□□□ 0.09
COL7A1-208ENST00000470076 COQ8BQ96D53 544 aa15.6■□□□□ 0.09
COL7A1-208ENST00000470076 HDHD5Q9BXW7 423 aa15.6■□□□□ 0.09
COL7A1-208ENST00000470076 C12orf49Q9H741 205 aa15.6■□□□□ 0.09
COL7A1-208ENST00000470076 CXorf36Q9H7Y0 433 aa15.6■□□□□ 0.09
COL7A1-208ENST00000470076 GP6Q9HCN6 339 aa15.6■□□□□ 0.09
COL7A1-208ENST00000470076 GPATCH2Q9NW75 528 aa15.6■□□□□ 0.09
COL7A1-208ENST00000470076 SLC17A7Q9P2U7 560 aa15.6■□□□□ 0.09
COL7A1-208ENST00000470076 HIVEP2P31629 2446 aa15.6■□□□□ 0.09
COL7A1-208ENST00000470076 FREM1Q5H8C1 2179 aa15.6■□□□□ 0.09
COL7A1-208ENST00000470076 GTPBP1O00178 669 aaKnown RBP15.59■□□□□ 0.09
COL7A1-208ENST00000470076 ZNF195O14628 629 aa15.59■□□□□ 0.09
COL7A1-208ENST00000470076 SLU7O95391 586 aaKnown RBP15.59■□□□□ 0.09
COL7A1-208ENST00000470076 C6orf47O95873 294 aa15.59■□□□□ 0.09
COL7A1-208ENST00000470076 NUDT17P0C025 328 aa15.59■□□□□ 0.09
COL7A1-208ENST00000470076 PAX1P15863 534 aa15.59■□□□□ 0.09
COL7A1-208ENST00000470076 PRPS1L1P21108 318 aa15.59■□□□□ 0.09
COL7A1-208ENST00000470076 SHC1P29353 583 aa15.59■□□□□ 0.09
COL7A1-208ENST00000470076 PTH2RP49190 550 aa15.59■□□□□ 0.09
COL7A1-208ENST00000470076 ATP12AP54707 1039 aa15.59■□□□□ 0.09
COL7A1-208ENST00000470076 IL23RQ5VWK5 629 aa15.59■□□□□ 0.09
COL7A1-208ENST00000470076 ZCCHC23Q6ZST2 131 aa15.59■□□□□ 0.09
COL7A1-208ENST00000470076 CIARTQ8N365 385 aaPredicted RBP15.59■□□□□ 0.09
COL7A1-208ENST00000470076 FNDC5Q8NAU1 212 aa15.59■□□□□ 0.09
COL7A1-208ENST00000470076 FBXO27Q8NI29 283 aa15.59■□□□□ 0.09
COL7A1-208ENST00000470076 TCP10LQ8TDR4 215 aa15.59■□□□□ 0.09
COL7A1-208ENST00000470076 ABHD3Q8WU67 409 aa15.59■□□□□ 0.09
COL7A1-208ENST00000470076 PLPPR2Q96GM1 343 aa15.59■□□□□ 0.09
COL7A1-208ENST00000470076 C3orf30Q96M34 536 aa15.59■□□□□ 0.09
COL7A1-208ENST00000470076 TMEM204Q9BSN7 226 aa15.59■□□□□ 0.09
COL7A1-208ENST00000470076 C1orf50Q9BV19 199 aa15.59■□□□□ 0.09
COL7A1-208ENST00000470076 BHLHE41Q9C0J9 482 aaPredicted RBP15.59■□□□□ 0.09
COL7A1-208ENST00000470076 L2HGDHQ9H9P8 463 aa15.59■□□□□ 0.09
COL7A1-208ENST00000470076 KLHL13Q9P2N7 655 aa15.59■□□□□ 0.09
COL7A1-208ENST00000470076 LGALS13Q9UHV8 139 aa15.59■□□□□ 0.09
COL7A1-208ENST00000470076 CARD8Q9Y2G2 431 aa15.59■□□□□ 0.09
COL7A1-208ENST00000470076 NPIPA5A0A0B4J1W7 369 aa15.58■□□□□ 0.08
COL7A1-208ENST00000470076 NPIPA7E9PJI5 369 aa15.58■□□□□ 0.08
COL7A1-208ENST00000470076 NPIPB9F8W1W9 429 aa15.58■□□□□ 0.08
COL7A1-208ENST00000470076 OIP5O43482 229 aa15.58■□□□□ 0.08
COL7A1-208ENST00000470076 EFNA2O43921 213 aa15.58■□□□□ 0.08
COL7A1-208ENST00000470076 SPAG7O75391 227 aa15.58■□□□□ 0.08
COL7A1-208ENST00000470076 NPIPA8P0DM63 369 aa15.58■□□□□ 0.08
COL7A1-208ENST00000470076 PRKCAP17252 672 aa15.58■□□□□ 0.08
COL7A1-208ENST00000470076 DDX59Q5T1V6 619 aaKnown RBP eCLIP15.58■□□□□ 0.08
COL7A1-208ENST00000470076 BHLHB9Q6PI77 547 aa15.58■□□□□ 0.08
COL7A1-208ENST00000470076 RIMKLAQ8IXN7 391 aa15.58■□□□□ 0.08
COL7A1-208ENST00000470076 KRTCAP2Q8N6L1 136 aa15.58■□□□□ 0.08
COL7A1-208ENST00000470076 ZNF611Q8N823 705 aa15.58■□□□□ 0.08
COL7A1-208ENST00000470076 GPR119Q8TDV5 335 aa15.58■□□□□ 0.08
COL7A1-208ENST00000470076 MRGPRX4Q96LA9 322 aa15.58■□□□□ 0.08
COL7A1-208ENST00000470076 SRXN1Q9BYN0 137 aa15.58■□□□□ 0.08
COL7A1-208ENST00000470076 CXorf56Q9H5V9 222 aa15.58■□□□□ 0.08
COL7A1-208ENST00000470076 ZDHHC2Q9UIJ5 367 aa15.58■□□□□ 0.08
COL7A1-208ENST00000470076 DTNAQ9Y4J8 743 aa15.58■□□□□ 0.08
COL7A1-208ENST00000470076 KCNE3Q9Y6H6 103 aa15.58■□□□□ 0.08
COL7A1-208ENST00000470076 TRIM64A6NGJ6 449 aa15.57■□□□□ 0.08
COL7A1-208ENST00000470076 TRIM64BA6NI03 449 aa15.57■□□□□ 0.08
COL7A1-208ENST00000470076 HS3ST1O14792 307 aa15.57■□□□□ 0.08
COL7A1-208ENST00000470076 CFLARO15519 480 aa15.57■□□□□ 0.08
COL7A1-208ENST00000470076 EIF4E2O60573 245 aaKnown RBP15.57■□□□□ 0.08
COL7A1-208ENST00000470076 SKAP2O75563 359 aaPredicted RBP15.57■□□□□ 0.08
COL7A1-208ENST00000470076 GCM2O75603 506 aaPredicted RBP15.57■□□□□ 0.08
COL7A1-208ENST00000470076 PRKD3O94806 890 aa15.57■□□□□ 0.08
COL7A1-208ENST00000470076 PLAUP00749 431 aa15.57■□□□□ 0.08
COL7A1-208ENST00000470076 ARRB2P32121 409 aa15.57■□□□□ 0.08
COL7A1-208ENST00000470076 IFFO1Q0D2I5 559 aa15.57■□□□□ 0.08
COL7A1-208ENST00000470076 SELENBP1Q13228 472 aa15.57■□□□□ 0.08
COL7A1-208ENST00000470076 MAD2L1Q13257 205 aaPredicted RBP15.57■□□□□ 0.08
COL7A1-208ENST00000470076 TOMM34Q15785 309 aaPredicted RBP15.57■□□□□ 0.08
COL7A1-208ENST00000470076 TMEM176BQ3YBM2 270 aaPredicted RBP15.57■□□□□ 0.08
COL7A1-208ENST00000470076 SLC25A53Q5H9E4 307 aa15.57■□□□□ 0.08
COL7A1-208ENST00000470076 TFAP2EQ6VUC0 442 aa15.57■□□□□ 0.08
COL7A1-208ENST00000470076 FCRLAQ7L513 359 aa15.57■□□□□ 0.08
COL7A1-208ENST00000470076 TUSC5Q8IXB3 177 aa15.57■□□□□ 0.08
COL7A1-208ENST00000470076 GABRG1Q8N1C3 465 aa15.57■□□□□ 0.08
COL7A1-208ENST00000470076 SLC43A2Q8N370 569 aa15.57■□□□□ 0.08
COL7A1-208ENST00000470076 ZNF614Q8N883 585 aa15.57■□□□□ 0.08
COL7A1-208ENST00000470076 TOR1AIP2Q8NFQ8 470 aa15.57■□□□□ 0.08
COL7A1-208ENST00000470076 ZFP90Q8TF47 636 aa15.57■□□□□ 0.08
COL7A1-208ENST00000470076 S100PBPQ96BU1 408 aa15.57■□□□□ 0.08
COL7A1-208ENST00000470076 TUBGCP3Q96CW5 907 aa15.57■□□□□ 0.08
COL7A1-208ENST00000470076 TRIM44Q96DX7 344 aaPredicted RBP15.57■□□□□ 0.08
COL7A1-208ENST00000470076 OR7D2Q96RA2 312 aa15.57■□□□□ 0.08
COL7A1-208ENST00000470076 TACO1Q9BSH4 297 aaKnown RBP15.57■□□□□ 0.08
COL7A1-208ENST00000470076 DUSP26Q9BV47 211 aa15.57■□□□□ 0.08
COL7A1-208ENST00000470076 ROPN1BQ9BZX4 212 aaPredicted RBP15.57■□□□□ 0.08
COL7A1-208ENST00000470076 COQ10BQ9H8M1 238 aa15.57■□□□□ 0.08
COL7A1-208ENST00000470076 ROPN1Q9HAT0 212 aaPredicted RBP15.57■□□□□ 0.08
COL7A1-208ENST00000470076 NGBQ9NPG2 151 aa15.57■□□□□ 0.08
COL7A1-208ENST00000470076 ZNF701Q9NV72 531 aaPredicted RBP15.57■□□□□ 0.08
COL7A1-208ENST00000470076 DUXAA6NLW8 204 aa15.56■□□□□ 0.08
COL7A1-208ENST00000470076 SMAD7O15105 426 aaKnown RBP15.56■□□□□ 0.08
COL7A1-208ENST00000470076 ZNF264O43296 627 aa15.56■□□□□ 0.08
COL7A1-208ENST00000470076 CNOT4O95628 575 aaKnown RBP15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms