RNA–Protein interactions for RNA: ENST00000468136.5

MSH5-213, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 690 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-213ENST00000468136 SPTBP11277 2137 aa9.38□□□□□ -0.91
MSH5-213ENST00000468136 ASXL3Q9C0F0 2248 aa9.38□□□□□ -0.91
MSH5-213ENST00000468136 A0A087WUJ7 227 aa9.38□□□□□ -0.91
MSH5-213ENST00000468136 A0A1B0GWA3 101 aa9.38□□□□□ -0.91
MSH5-213ENST00000468136 FAM86C2PA6NEL3 165 aa9.38□□□□□ -0.91
MSH5-213ENST00000468136 OR6C70A6NIJ9 312 aa9.38□□□□□ -0.91
MSH5-213ENST00000468136 CLDN24A6NM45 220 aa9.38□□□□□ -0.91
MSH5-213ENST00000468136 ENO4A6NNW6 628 aa9.38□□□□□ -0.91
MSH5-213ENST00000468136 IDSB3KWA1 339 aa9.38□□□□□ -0.91
MSH5-213ENST00000468136 ALG1L2C9J202 215 aa9.38□□□□□ -0.91
MSH5-213ENST00000468136 GTPBP1O00178 669 aaKnown RBP9.38□□□□□ -0.91
MSH5-213ENST00000468136 HRKO00198 91 aa9.38□□□□□ -0.91
MSH5-213ENST00000468136 MEN1O00255 615 aa9.38□□□□□ -0.91
MSH5-213ENST00000468136 PRODHO43272 600 aa9.38□□□□□ -0.91
MSH5-213ENST00000468136 ZNF264O43296 627 aa9.38□□□□□ -0.91
MSH5-213ENST00000468136 HYAL3O43820 417 aaPredicted RBP9.38□□□□□ -0.91
MSH5-213ENST00000468136 TSPAN2O60636 221 aa9.38□□□□□ -0.91
MSH5-213ENST00000468136 LYPD3O95274 346 aa9.38□□□□□ -0.91
MSH5-213ENST00000468136 UTS2O95399 124 aa9.38□□□□□ -0.91
MSH5-213ENST00000468136 MYF5P13349 255 aa9.38□□□□□ -0.91
MSH5-213ENST00000468136 CCNA2P20248 432 aa9.38□□□□□ -0.91
MSH5-213ENST00000468136 ACVR2AP27037 513 aa9.38□□□□□ -0.91
MSH5-213ENST00000468136 HTR2AP28223 471 aa9.38□□□□□ -0.91
MSH5-213ENST00000468136 CAPZA2P47755 286 aa9.38□□□□□ -0.91
MSH5-213ENST00000468136 RFX3P48380 749 aa9.38□□□□□ -0.91
MSH5-213ENST00000468136 TMED10P49755 219 aaKnown RBP9.38□□□□□ -0.91
MSH5-213ENST00000468136 PLCXD2Q0VAA5 305 aa9.38□□□□□ -0.91
MSH5-213ENST00000468136 RAB40BQ12829 278 aa9.38□□□□□ -0.91
MSH5-213ENST00000468136 DYNC1I2Q13409 638 aaKnown RBP9.38□□□□□ -0.91
MSH5-213ENST00000468136 LSAMPQ13449 338 aa9.38□□□□□ -0.91
MSH5-213ENST00000468136 PGGHGQ32M88 737 aa9.38□□□□□ -0.91
MSH5-213ENST00000468136 TIMM50Q3ZCQ8 353 aa9.38□□□□□ -0.91
MSH5-213ENST00000468136 FNDC7Q5VTL7 733 aa9.38□□□□□ -0.91
MSH5-213ENST00000468136 C1orf189Q5VU69 101 aa9.38□□□□□ -0.91
MSH5-213ENST00000468136 PLAG1Q6DJT9 500 aa9.38□□□□□ -0.91
MSH5-213ENST00000468136 PWWP2BQ6NUJ5 590 aa9.38□□□□□ -0.91
MSH5-213ENST00000468136 MRPL14Q6P1L8 145 aaKnown RBP9.38□□□□□ -0.91
MSH5-213ENST00000468136 TMEM205Q6UW68 189 aa9.38□□□□□ -0.91
MSH5-213ENST00000468136 C5orf46Q6UWT4 87 aa9.38□□□□□ -0.91
MSH5-213ENST00000468136 HSDL2Q6YN16 418 aa9.38□□□□□ -0.91
MSH5-213ENST00000468136 RTL4Q6ZR62 310 aa9.38□□□□□ -0.91
MSH5-213ENST00000468136 AHSA2Q719I0 299 aa9.38□□□□□ -0.91
MSH5-213ENST00000468136 TMPRSS9Q7Z410 1059 aa9.38□□□□□ -0.91
MSH5-213ENST00000468136 ANKRD37Q7Z713 158 aa9.38□□□□□ -0.91
MSH5-213ENST00000468136 GID4Q8IVV7 300 aa9.38□□□□□ -0.91
MSH5-213ENST00000468136 SLC15A4Q8N697 577 aa9.38□□□□□ -0.91
MSH5-213ENST00000468136 ZSCAN1Q8NBB4 408 aa9.38□□□□□ -0.91
MSH5-213ENST00000468136 POGLUT1Q8NBL1 392 aa9.38□□□□□ -0.91
MSH5-213ENST00000468136 OR4N2Q8NGD1 307 aa9.38□□□□□ -0.91
MSH5-213ENST00000468136 CNOT9Q92600 299 aaKnown RBP9.38□□□□□ -0.91
MSH5-213ENST00000468136 TTC9Q92623 222 aa9.38□□□□□ -0.91
MSH5-213ENST00000468136 TMIGD2Q96BF3 282 aa9.38□□□□□ -0.91
MSH5-213ENST00000468136 TMEM80Q96HE8 168 aa9.38□□□□□ -0.91
MSH5-213ENST00000468136 FAM46AQ96IP4 442 aaKnown RBP9.38□□□□□ -0.91
MSH5-213ENST00000468136 TMEM43Q9BTV4 400 aa9.38□□□□□ -0.91
MSH5-213ENST00000468136 NUDT9Q9BW91 350 aa9.38□□□□□ -0.91
MSH5-213ENST00000468136 TSSK6Q9BXA6 273 aa9.38□□□□□ -0.91
MSH5-213ENST00000468136 LHPPQ9H008 270 aa9.38□□□□□ -0.91
MSH5-213ENST00000468136 NXF5Q9H1B4 397 aaKnown RBP9.38□□□□□ -0.91
MSH5-213ENST00000468136 SYNDIG1Q9H7V2 258 aa9.38□□□□□ -0.91
MSH5-213ENST00000468136 C11orf16Q9NQ32 467 aa9.38□□□□□ -0.91
MSH5-213ENST00000468136 SLC22A11Q9NSA0 550 aa9.38□□□□□ -0.91
MSH5-213ENST00000468136 TBC1D23Q9NUY8 699 aa9.38□□□□□ -0.91
MSH5-213ENST00000468136 FBXO34Q9NWN3 711 aa9.38□□□□□ -0.91
MSH5-213ENST00000468136 PAK1IP1Q9NWT1 392 aaPredicted RBP9.38□□□□□ -0.91
MSH5-213ENST00000468136 CHCHD3Q9NX63 227 aaKnown RBP9.38□□□□□ -0.91
MSH5-213ENST00000468136 TVP23BQ9NYZ1 205 aa9.38□□□□□ -0.91
MSH5-213ENST00000468136 ERVK-18Q9QC07 812 aa9.38□□□□□ -0.91
MSH5-213ENST00000468136 WARS2Q9UGM6 360 aaKnown RBP9.38□□□□□ -0.91
MSH5-213ENST00000468136 ICAM5Q9UMF0 924 aa9.38□□□□□ -0.91
MSH5-213ENST00000468136 ERGIC3Q9Y282 383 aa9.38□□□□□ -0.91
MSH5-213ENST00000468136 DTX4Q9Y2E6 619 aa9.38□□□□□ -0.91
MSH5-213ENST00000468136 COL5A1P20908 1838 aaPredicted RBP9.38□□□□□ -0.91
MSH5-213ENST00000468136 SDK1Q7Z5N4 2213 aa9.37□□□□□ -0.91
MSH5-213ENST00000468136 EFCAB9A8MZ26 197 aa9.37□□□□□ -0.91
MSH5-213ENST00000468136 PATE3B3GLJ2 98 aa9.37□□□□□ -0.91
MSH5-213ENST00000468136 SLC22A1O15245 554 aa9.37□□□□□ -0.91
MSH5-213ENST00000468136 IDH3BO43837 385 aa9.37□□□□□ -0.91
MSH5-213ENST00000468136 MAN1A2O60476 641 aa9.37□□□□□ -0.91
MSH5-213ENST00000468136 FOXD2O60548 495 aaPredicted RBP9.37□□□□□ -0.91
MSH5-213ENST00000468136 BCAS1O75363 584 aaPredicted RBP9.37□□□□□ -0.91
MSH5-213ENST00000468136 REM1O75628 298 aa9.37□□□□□ -0.91
MSH5-213ENST00000468136 SOX14O95416 240 aa9.37□□□□□ -0.91
MSH5-213ENST00000468136 IFNGP01579 166 aa9.37□□□□□ -0.91
MSH5-213ENST00000468136 MT-ND2P03891 347 aa9.37□□□□□ -0.91
MSH5-213ENST00000468136 THY1P04216 161 aa9.37□□□□□ -0.91
MSH5-213ENST00000468136 GKN3PP0CG01 181 aa9.37□□□□□ -0.91
MSH5-213ENST00000468136 IFI30P13284 250 aa9.37□□□□□ -0.91
MSH5-213ENST00000468136 SLC5A2P31639 672 aa9.37□□□□□ -0.91
MSH5-213ENST00000468136 SLC6A6P31641 620 aa9.37□□□□□ -0.91
MSH5-213ENST00000468136 HTR3AP46098 478 aa9.37□□□□□ -0.91
MSH5-213ENST00000468136 MAP2K6P52564 334 aa9.37□□□□□ -0.91
MSH5-213ENST00000468136 SUMO3P55854 103 aaPredicted RBP9.37□□□□□ -0.91
MSH5-213ENST00000468136 SLC26A5P58743 744 aa9.37□□□□□ -0.91
MSH5-213ENST00000468136 ST3GAL4Q11206 333 aa9.37□□□□□ -0.91
MSH5-213ENST00000468136 EIF3IQ13347 325 aaKnown RBP9.37□□□□□ -0.91
MSH5-213ENST00000468136 C1DQ13901 141 aaKnown RBP9.37□□□□□ -0.91
MSH5-213ENST00000468136 IRF3Q14653 427 aa9.37□□□□□ -0.91
MSH5-213ENST00000468136 ISXQ2M1V0 245 aa9.37□□□□□ -0.91
MSH5-213ENST00000468136 GPR107Q5VW38 600 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms