RNA–Protein interactions for RNA: ENST00000464362.5

HPS4-208, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 5

Gene HPS4, Length 4,277 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-208ENST00000464362 PLSCR3Q9NRY6 295 aa8.49□□□□□ -1.05
HPS4-208ENST00000464362 SPATA6Q9NWH7 488 aaPredicted RBP8.49□□□□□ -1.05
HPS4-208ENST00000464362 ZNF226Q9NYT6 803 aa8.49□□□□□ -1.05
HPS4-208ENST00000464362 MLXQ9UH92 298 aa8.49□□□□□ -1.05
HPS4-208ENST00000464362 MUTYHQ9UIF7 546 aa8.49□□□□□ -1.05
HPS4-208ENST00000464362 RCE1Q9Y256 329 aa8.49□□□□□ -1.05
HPS4-208ENST00000464362 RGPD3A6NKT7 1758 aaPredicted RBP8.49□□□□□ -1.05
HPS4-208ENST00000464362 RGPD4Q7Z3J3 1758 aa8.49□□□□□ -1.05
HPS4-208ENST00000464362 SCN3AQ9NY46 2000 aa8.49□□□□□ -1.05
HPS4-208ENST00000464362 PRRT4C9JH25 899 aa8.49□□□□□ -1.05
HPS4-208ENST00000464362 NPIPA5E9PKD4 350 aa8.49□□□□□ -1.05
HPS4-208ENST00000464362 CREBL2O60519 120 aaPredicted RBP8.49□□□□□ -1.05
HPS4-208ENST00000464362 HCKP08631 526 aa8.49□□□□□ -1.05
HPS4-208ENST00000464362 ATP5A1P25705 553 aaKnown RBP8.49□□□□□ -1.05
HPS4-208ENST00000464362 NTSR1P30989 418 aa8.49□□□□□ -1.05
HPS4-208ENST00000464362 CCR2P41597 374 aa8.49□□□□□ -1.05
HPS4-208ENST00000464362 XCR1P46094 333 aa8.49□□□□□ -1.05
HPS4-208ENST00000464362 MCCD1P59942 119 aaPredicted RBP8.49□□□□□ -1.05
HPS4-208ENST00000464362 ACTC1P68032 377 aa8.49□□□□□ -1.05
HPS4-208ENST00000464362 ACTA1P68133 377 aa8.49□□□□□ -1.05
HPS4-208ENST00000464362 HHEXQ03014 270 aa8.49□□□□□ -1.05
HPS4-208ENST00000464362 GRK1Q15835 563 aa8.49□□□□□ -1.05
HPS4-208ENST00000464362 HENMT1Q5T8I9 393 aaKnown RBP8.49□□□□□ -1.05
HPS4-208ENST00000464362 OTPQ5XKR4 325 aa8.49□□□□□ -1.05
HPS4-208ENST00000464362 ARHGAP11AQ6P4F7 1023 aa8.49□□□□□ -1.05
HPS4-208ENST00000464362 FAM83HQ6ZRV2 1179 aaPredicted RBP8.49□□□□□ -1.05
HPS4-208ENST00000464362 GALNT11Q8NCW6 608 aa8.49□□□□□ -1.05
HPS4-208ENST00000464362 OR9A4Q8NGU2 314 aa8.49□□□□□ -1.05
HPS4-208ENST00000464362 OR2AJ1Q8NGZ0 328 aa8.49□□□□□ -1.05
HPS4-208ENST00000464362 SETD6Q8TBK2 473 aa8.49□□□□□ -1.05
HPS4-208ENST00000464362 CREB3L1Q96BA8 519 aa8.49□□□□□ -1.05
HPS4-208ENST00000464362 NEURL3Q96EH8 262 aa8.49□□□□□ -1.05
HPS4-208ENST00000464362 COQ10AQ96MF6 247 aa8.49□□□□□ -1.05
HPS4-208ENST00000464362 TNFRSF13CQ96RJ3 184 aa8.49□□□□□ -1.05
HPS4-208ENST00000464362 ALOXE3Q9BYJ1 711 aa8.49□□□□□ -1.05
HPS4-208ENST00000464362 OR51J1Q9H342 316 aa8.49□□□□□ -1.05
HPS4-208ENST00000464362 SLC23A2Q9UGH3 650 aa8.49□□□□□ -1.05
HPS4-208ENST00000464362 UBQLN2Q9UHD9 624 aa8.49□□□□□ -1.05
HPS4-208ENST00000464362 NPIPA1Q9UND3 350 aa8.49□□□□□ -1.05
HPS4-208ENST00000464362 ERVK-19Q9WJR5 959 aa8.49□□□□□ -1.05
HPS4-208ENST00000464362 NAALAD2Q9Y3Q0 740 aa8.49□□□□□ -1.05
HPS4-208ENST00000464362 CACNG2Q9Y698 323 aa8.49□□□□□ -1.05
HPS4-208ENST00000464362 ZDBF2Q9HCK1 2354 aa8.49□□□□□ -1.05
HPS4-208ENST00000464362 A0A0X1KG70 313 aa8.49□□□□□ -1.05
HPS4-208ENST00000464362 SLC5A10A0PJK1 596 aa8.49□□□□□ -1.05
HPS4-208ENST00000464362 F5H0A9 414 aaPredicted RBP8.49□□□□□ -1.05
HPS4-208ENST00000464362 NDUFB2O95178 105 aa8.49□□□□□ -1.05
HPS4-208ENST00000464362 SPDEFO95238 335 aa8.49□□□□□ -1.05
HPS4-208ENST00000464362 CRYZL1O95825 349 aa8.49□□□□□ -1.05
HPS4-208ENST00000464362 CYB5AP00167 134 aa8.49□□□□□ -1.05
HPS4-208ENST00000464362 CHRNB1P11230 501 aa8.49□□□□□ -1.05
HPS4-208ENST00000464362 JUNDP17535 347 aa8.49□□□□□ -1.05
HPS4-208ENST00000464362 HSD11B1P28845 292 aa8.49□□□□□ -1.05
HPS4-208ENST00000464362 SOX18P35713 384 aa8.49□□□□□ -1.05
HPS4-208ENST00000464362 VEGFBP49765 207 aa8.49□□□□□ -1.05
HPS4-208ENST00000464362 PDX1P52945 283 aa8.49□□□□□ -1.05
HPS4-208ENST00000464362 OR1Q1Q15612 314 aa8.49□□□□□ -1.05
HPS4-208ENST00000464362 DCST2Q5T1A1 773 aa8.49□□□□□ -1.05
HPS4-208ENST00000464362 CARD17Q5XLA6 110 aa8.49□□□□□ -1.05
HPS4-208ENST00000464362 ASTLQ6HA08 431 aaPredicted RBP8.49□□□□□ -1.05
HPS4-208ENST00000464362 LRRN1Q6UXK5 716 aa8.49□□□□□ -1.05
HPS4-208ENST00000464362 ESPNLQ6ZVH7 1005 aa8.49□□□□□ -1.05
HPS4-208ENST00000464362 SLC29A4Q7RTT9 530 aa8.49□□□□□ -1.05
HPS4-208ENST00000464362 CCDC36Q8IYA8 594 aa8.49□□□□□ -1.05
HPS4-208ENST00000464362 ZNF683Q8IZ20 524 aa8.49□□□□□ -1.05
HPS4-208ENST00000464362 OR5K2Q8NHB8 316 aa8.49□□□□□ -1.05
HPS4-208ENST00000464362 CHFRQ96EP1 664 aa8.49□□□□□ -1.05
HPS4-208ENST00000464362 METTL2AQ96IZ6 378 aaKnown RBP8.49□□□□□ -1.05
HPS4-208ENST00000464362 FN3KQ9H479 309 aa8.49□□□□□ -1.05
HPS4-208ENST00000464362 RANBP3Q9H6Z4 567 aaPredicted RBP8.49□□□□□ -1.05
HPS4-208ENST00000464362 C1GALT1Q9NS00 363 aa8.49□□□□□ -1.05
HPS4-208ENST00000464362 MAFFQ9ULX9 164 aa8.49□□□□□ -1.05
HPS4-208ENST00000464362 GPR89AB7ZAQ6 455 aa8.48□□□□□ -1.05
HPS4-208ENST00000464362 EEF1E1-BLOC1S5C9J1V9 151 aa8.48□□□□□ -1.05
HPS4-208ENST00000464362 KIAA0355O15063 1070 aa8.48□□□□□ -1.05
HPS4-208ENST00000464362 B3GALNT1O75752 331 aa8.48□□□□□ -1.05
HPS4-208ENST00000464362 HNRNPA1P09651 372 aaKnown RBP eCLIP8.48□□□□□ -1.05
HPS4-208ENST00000464362 GPR89BP0CG08 455 aa8.48□□□□□ -1.05
HPS4-208ENST00000464362 C5AR1P21730 350 aa8.48□□□□□ -1.05
HPS4-208ENST00000464362 TSPAN31Q12999 210 aa8.48□□□□□ -1.05
HPS4-208ENST00000464362 KIAA0040Q15053 153 aa8.48□□□□□ -1.05
HPS4-208ENST00000464362 PYHIN1Q6K0P9 492 aa8.48□□□□□ -1.05
HPS4-208ENST00000464362 VN1R2Q8NFZ6 395 aa8.48□□□□□ -1.05
HPS4-208ENST00000464362 GHSRQ92847 366 aa8.48□□□□□ -1.05
HPS4-208ENST00000464362 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.48□□□□□ -1.05
HPS4-208ENST00000464362 TMEM168Q9H0V1 697 aa8.48□□□□□ -1.05
HPS4-208ENST00000464362 CST11Q9H112 138 aa8.48□□□□□ -1.05
HPS4-208ENST00000464362 TAS2R3Q9NYW6 316 aa8.48□□□□□ -1.05
HPS4-208ENST00000464362 METTL21EPA6NDL7 271 aa8.48□□□□□ -1.05
HPS4-208ENST00000464362 UPK1AO00322 258 aa8.48□□□□□ -1.05
HPS4-208ENST00000464362 CASC3O15234 703 aaKnown RBP8.48□□□□□ -1.05
HPS4-208ENST00000464362 FABP7O15540 132 aa8.48□□□□□ -1.05
HPS4-208ENST00000464362 SSX4O60224 188 aa8.48□□□□□ -1.05
HPS4-208ENST00000464362 LCMT2O60294 686 aaKnown RBP8.48□□□□□ -1.05
HPS4-208ENST00000464362 TFP02787 698 aa8.48□□□□□ -1.05
HPS4-208ENST00000464362 UCHL1P09936 223 aa8.48□□□□□ -1.05
HPS4-208ENST00000464362 OR8G3PP0DMU2 310 aa8.48□□□□□ -1.05
HPS4-208ENST00000464362 MYOGP15173 224 aa8.48□□□□□ -1.05
HPS4-208ENST00000464362 SRP9P49458 86 aaKnown RBP8.48□□□□□ -1.05
HPS4-208ENST00000464362 CSNK1G2P78368 415 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms