RNA–Protein interactions for RNA: ENST00000463007.5

HDAC4-208, Transcript of histone deacetylase 4, humanhuman

TSL 1 (best)

Gene HDAC4, Length 3,158 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-208ENST00000463007 IFT27Q9BW83 186 aa11.57□□□□□ -0.56
HDAC4-208ENST00000463007 GPR174Q9BXC1 333 aa11.57□□□□□ -0.56
HDAC4-208ENST00000463007 TEX12Q9BXU0 123 aa11.57□□□□□ -0.56
HDAC4-208ENST00000463007 BTBD1Q9H0C5 482 aa11.57□□□□□ -0.56
HDAC4-208ENST00000463007 KCNK6Q9Y257 313 aa11.57□□□□□ -0.56
HDAC4-208ENST00000463007 OR1A2Q9Y585 309 aa11.57□□□□□ -0.56
HDAC4-208ENST00000463007 TRAV27A0A087WT01 109 aa11.56□□□□□ -0.56
HDAC4-208ENST00000463007 LGALS8O00214 317 aa11.56□□□□□ -0.56
HDAC4-208ENST00000463007 MPC2O95563 127 aa11.56□□□□□ -0.56
HDAC4-208ENST00000463007 FGF9P31371 208 aaPredicted RBP11.56□□□□□ -0.56
HDAC4-208ENST00000463007 AP2S1P53680 142 aaPredicted RBP11.56□□□□□ -0.56
HDAC4-208ENST00000463007 TSPAN5P62079 268 aa11.56□□□□□ -0.56
HDAC4-208ENST00000463007 RGS1Q08116 209 aa11.56□□□□□ -0.56
HDAC4-208ENST00000463007 TRAM2Q15035 370 aa11.56□□□□□ -0.56
HDAC4-208ENST00000463007 ST3GAL2Q16842 350 aa11.56□□□□□ -0.56
HDAC4-208ENST00000463007 TP53I3Q53FA7 332 aa11.56□□□□□ -0.56
HDAC4-208ENST00000463007 CDC73Q6P1J9 531 aa11.56□□□□□ -0.56
HDAC4-208ENST00000463007 LINGO2Q7L985 606 aa11.56□□□□□ -0.56
HDAC4-208ENST00000463007 DCUN1D3Q8IWE4 304 aa11.56□□□□□ -0.56
HDAC4-208ENST00000463007 PFN4Q8NHR9 129 aa11.56□□□□□ -0.56
HDAC4-208ENST00000463007 FAM131CQ96AQ9 280 aa11.56□□□□□ -0.56
HDAC4-208ENST00000463007 CNRIP1Q96F85 164 aaPredicted RBP11.56□□□□□ -0.56
HDAC4-208ENST00000463007 DDOQ99489 341 aa11.56□□□□□ -0.56
HDAC4-208ENST00000463007 TEX101Q9BY14 249 aa11.56□□□□□ -0.56
HDAC4-208ENST00000463007 PIGUQ9H490 435 aa11.56□□□□□ -0.56
HDAC4-208ENST00000463007 DPP7Q9UHL4 492 aa11.56□□□□□ -0.56
HDAC4-208ENST00000463007 RTTNQ86VV8 2226 aa11.56□□□□□ -0.56
HDAC4-208ENST00000463007 SURF4O15260 269 aa11.56□□□□□ -0.56
HDAC4-208ENST00000463007 RGS9O75916 674 aaPredicted RBP11.56□□□□□ -0.56
HDAC4-208ENST00000463007 RAF1P04049 648 aa11.56□□□□□ -0.56
HDAC4-208ENST00000463007 ALDOBP05062 364 aa11.56□□□□□ -0.56
HDAC4-208ENST00000463007 UBL4AP11441 157 aa11.56□□□□□ -0.56
HDAC4-208ENST00000463007 AHCYP23526 432 aa11.56□□□□□ -0.56
HDAC4-208ENST00000463007 SELENOPP49908 381 aa11.56□□□□□ -0.56
HDAC4-208ENST00000463007 CCR8P51685 355 aa11.56□□□□□ -0.56
HDAC4-208ENST00000463007 ARHGDIBP52566 201 aa11.56□□□□□ -0.56
HDAC4-208ENST00000463007 PDX1P52945 283 aa11.56□□□□□ -0.56
HDAC4-208ENST00000463007 CDK3Q00526 305 aa11.56□□□□□ -0.56
HDAC4-208ENST00000463007 SNTB2Q13425 540 aaKnown RBP11.56□□□□□ -0.56
HDAC4-208ENST00000463007 TIGD3Q6B0B8 471 aa11.56□□□□□ -0.56
HDAC4-208ENST00000463007 SLC25A25Q6KCM7 469 aa11.56□□□□□ -0.56
HDAC4-208ENST00000463007 ZC3H14Q6PJT7 736 aaKnown RBP11.56□□□□□ -0.56
HDAC4-208ENST00000463007 VITQ6UXI7 678 aa11.56□□□□□ -0.56
HDAC4-208ENST00000463007 AMZ2Q86W34 360 aa11.56□□□□□ -0.56
HDAC4-208ENST00000463007 RFLNBQ8N5W9 214 aa11.56□□□□□ -0.56
HDAC4-208ENST00000463007 GNPDA2Q8TDQ7 276 aa11.56□□□□□ -0.56
HDAC4-208ENST00000463007 KCNJ15Q99712 375 aa11.56□□□□□ -0.56
HDAC4-208ENST00000463007 GAL3ST1Q99999 423 aa11.56□□□□□ -0.56
HDAC4-208ENST00000463007 PELI2Q9HAT8 420 aa11.56□□□□□ -0.56
HDAC4-208ENST00000463007 FOLH1BQ9HBA9 442 aa11.56□□□□□ -0.56
HDAC4-208ENST00000463007 C20orf141Q9NUB4 165 aa11.56□□□□□ -0.56
HDAC4-208ENST00000463007 NDOR1Q9UHB4 597 aa11.56□□□□□ -0.56
HDAC4-208ENST00000463007 CBLCQ9ULV8 474 aa11.56□□□□□ -0.56
HDAC4-208ENST00000463007 CEP290O15078 2479 aa11.56□□□□□ -0.56
HDAC4-208ENST00000463007 ZNF860A6NHJ4 632 aa11.55□□□□□ -0.56
HDAC4-208ENST00000463007 B8ZZF3 427 aa11.55□□□□□ -0.56
HDAC4-208ENST00000463007 PRR23D1E9PI22 279 aaPredicted RBP11.55□□□□□ -0.56
HDAC4-208ENST00000463007 PRR23D2P0DMB1 279 aaPredicted RBP11.55□□□□□ -0.56
HDAC4-208ENST00000463007 GSTM3P21266 225 aa11.55□□□□□ -0.56
HDAC4-208ENST00000463007 PCBP4P57723 403 aaKnown RBP11.55□□□□□ -0.56
HDAC4-208ENST00000463007 ST3GAL3Q11203 375 aa11.55□□□□□ -0.56
HDAC4-208ENST00000463007 OR4C11Q6IEV9 310 aa11.55□□□□□ -0.56
HDAC4-208ENST00000463007 OR2T33Q8NG76 320 aa11.55□□□□□ -0.56
HDAC4-208ENST00000463007 COQ8AQ8NI60 647 aa11.55□□□□□ -0.56
HDAC4-208ENST00000463007 ANGPTL6Q8NI99 470 aa11.55□□□□□ -0.56
HDAC4-208ENST00000463007 KIAA1143Q96AT1 154 aaPredicted RBP11.55□□□□□ -0.56
HDAC4-208ENST00000463007 MED18Q9BUE0 208 aa11.55□□□□□ -0.56
HDAC4-208ENST00000463007 SLC25A18Q9H1K4 315 aa11.55□□□□□ -0.56
HDAC4-208ENST00000463007 FGF20Q9NP95 211 aaPredicted RBP11.55□□□□□ -0.56
HDAC4-208ENST00000463007 ENTPD4Q9Y227 616 aa11.55□□□□□ -0.56
HDAC4-208ENST00000463007 FAM171A2A8MVW0 826 aa11.55□□□□□ -0.56
HDAC4-208ENST00000463007 MID1O15344 667 aa11.55□□□□□ -0.56
HDAC4-208ENST00000463007 PCDH8O95206 1070 aa11.55□□□□□ -0.56
HDAC4-208ENST00000463007 ADRB1P08588 477 aa11.55□□□□□ -0.56
HDAC4-208ENST00000463007 TEAD1P28347 426 aa11.55□□□□□ -0.56
HDAC4-208ENST00000463007 IFNGR2P38484 337 aa11.55□□□□□ -0.56
HDAC4-208ENST00000463007 PSMB10P40306 273 aa11.55□□□□□ -0.56
HDAC4-208ENST00000463007 KHKP50053 298 aa11.55□□□□□ -0.56
HDAC4-208ENST00000463007 UBE2MP61081 183 aaKnown RBP11.55□□□□□ -0.56
HDAC4-208ENST00000463007 REEP5Q00765 189 aa11.55□□□□□ -0.56
HDAC4-208ENST00000463007 TSPAN31Q12999 210 aa11.55□□□□□ -0.56
HDAC4-208ENST00000463007 DUSP6Q16828 381 aa11.55□□□□□ -0.56
HDAC4-208ENST00000463007 ODF4Q2M2E3 257 aa11.55□□□□□ -0.56
HDAC4-208ENST00000463007 PGGHGQ32M88 737 aa11.55□□□□□ -0.56
HDAC4-208ENST00000463007 GXYLT1Q4G148 440 aa11.55□□□□□ -0.56
HDAC4-208ENST00000463007 HES5Q5TA89 166 aa11.55□□□□□ -0.56
HDAC4-208ENST00000463007 FAM109BQ6ICB4 259 aaPredicted RBP11.55□□□□□ -0.56
HDAC4-208ENST00000463007 UBE3DQ7Z6J8 389 aa11.55□□□□□ -0.56
HDAC4-208ENST00000463007 NUP43Q8NFH3 380 aa11.55□□□□□ -0.56
HDAC4-208ENST00000463007 OR5M3Q8NGP4 307 aa11.55□□□□□ -0.56
HDAC4-208ENST00000463007 ADAMTS15Q8TE58 950 aa11.55□□□□□ -0.56
HDAC4-208ENST00000463007 OR7D2Q96RA2 312 aa11.55□□□□□ -0.56
HDAC4-208ENST00000463007 SEC22CQ9BRL7 303 aa11.55□□□□□ -0.56
HDAC4-208ENST00000463007 AICDAQ9GZX7 198 aa11.55□□□□□ -0.56
HDAC4-208ENST00000463007 KCNN2Q9H2S1 579 aa11.55□□□□□ -0.56
HDAC4-208ENST00000463007 UBQLN3Q9H347 655 aa11.55□□□□□ -0.56
HDAC4-208ENST00000463007 BABAM2Q9NXR7 383 aa11.55□□□□□ -0.56
HDAC4-208ENST00000463007 SLCO1C1Q9NYB5 712 aa11.55□□□□□ -0.56
HDAC4-208ENST00000463007 HCN3Q9P1Z3 774 aa11.55□□□□□ -0.56
HDAC4-208ENST00000463007 PLEKHM1Q9Y4G2 1056 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms