RNA–Protein interactions for RNA: ENST00000462553.2

CDC42BPA-210, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 430 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-210ENST00000462553 USH1CQ9Y6N9 552 aa7.13□□□□□ -1.27
CDC42BPA-210ENST00000462553 IGLV3-32A0A0A0MS00 114 aa7.12□□□□□ -1.27
CDC42BPA-210ENST00000462553 NPIPA5A0A0B4J1W7 369 aa7.12□□□□□ -1.27
CDC42BPA-210ENST00000462553 RNF103-CHMP3A0A140T963 221 aa7.12□□□□□ -1.27
CDC42BPA-210ENST00000462553 FAM181BA6NEQ2 426 aa7.12□□□□□ -1.27
CDC42BPA-210ENST00000462553 FAM171A2A8MVW0 826 aa7.12□□□□□ -1.27
CDC42BPA-210ENST00000462553 INAFM1C9JVW0 142 aa7.12□□□□□ -1.27
CDC42BPA-210ENST00000462553 NPIPA7E9PJI5 369 aa7.12□□□□□ -1.27
CDC42BPA-210ENST00000462553 ARHGEF9O43307 516 aa7.12□□□□□ -1.27
CDC42BPA-210ENST00000462553 ZIC3O60481 467 aa7.12□□□□□ -1.27
CDC42BPA-210ENST00000462553 SMPD2O60906 423 aa7.12□□□□□ -1.27
CDC42BPA-210ENST00000462553 KCNH1O95259 989 aa7.12□□□□□ -1.27
CDC42BPA-210ENST00000462553 CGAP01215 116 aa7.12□□□□□ -1.27
CDC42BPA-210ENST00000462553 NGFRP08138 427 aa7.12□□□□□ -1.27
CDC42BPA-210ENST00000462553 ALOX5P09917 674 aa7.12□□□□□ -1.27
CDC42BPA-210ENST00000462553 NPIPA8P0DM63 369 aa7.12□□□□□ -1.27
CDC42BPA-210ENST00000462553 TCEA1P23193 301 aaKnown RBP7.12□□□□□ -1.27
CDC42BPA-210ENST00000462553 CHMP24386 653 aa7.12□□□□□ -1.27
CDC42BPA-210ENST00000462553 PCSK6P29122 969 aa7.12□□□□□ -1.27
CDC42BPA-210ENST00000462553 SOAT1P35610 550 aa7.12□□□□□ -1.27
CDC42BPA-210ENST00000462553 CD79BP40259 229 aa7.12□□□□□ -1.27
CDC42BPA-210ENST00000462553 CDKN2CP42773 168 aa7.12□□□□□ -1.27
CDC42BPA-210ENST00000462553 KIR2DL2P43627 348 aaPredicted RBP7.12□□□□□ -1.27
CDC42BPA-210ENST00000462553 MRPL19P49406 292 aaKnown RBP7.12□□□□□ -1.27
CDC42BPA-210ENST00000462553 RPS26P62854 115 aaKnown RBP7.12□□□□□ -1.27
CDC42BPA-210ENST00000462553 KRTAP1-1Q07627 177 aa7.12□□□□□ -1.27
CDC42BPA-210ENST00000462553 FUT5Q11128 374 aa7.12□□□□□ -1.27
CDC42BPA-210ENST00000462553 TP53BP2Q13625 1128 aa7.12□□□□□ -1.27
CDC42BPA-210ENST00000462553 GUSBP1Q15486 140 aa7.12□□□□□ -1.27
CDC42BPA-210ENST00000462553 DPY19L1Q2PZI1 675 aa7.12□□□□□ -1.27
CDC42BPA-210ENST00000462553 FAM174BQ3ZCQ3 159 aa7.12□□□□□ -1.27
CDC42BPA-210ENST00000462553 VPS26BQ4G0F5 336 aa7.12□□□□□ -1.27
CDC42BPA-210ENST00000462553 PDCD4Q53EL6 469 aaKnown RBP7.12□□□□□ -1.27
CDC42BPA-210ENST00000462553 SAXO2Q658L1 398 aa7.12□□□□□ -1.27
CDC42BPA-210ENST00000462553 OR5M10Q6IEU7 315 aa7.12□□□□□ -1.27
CDC42BPA-210ENST00000462553 PRSS57Q6UWY2 283 aa7.12□□□□□ -1.27
CDC42BPA-210ENST00000462553 BTLAQ7Z6A9 289 aa7.12□□□□□ -1.27
CDC42BPA-210ENST00000462553 YTHDF3Q7Z739 585 aaKnown RBP7.12□□□□□ -1.27
CDC42BPA-210ENST00000462553 GRAMD2AQ8IUY3 354 aa7.12□□□□□ -1.27
CDC42BPA-210ENST00000462553 P3H2Q8IVL5 708 aa7.12□□□□□ -1.27
CDC42BPA-210ENST00000462553 COX18Q8N8Q8 333 aa7.12□□□□□ -1.27
CDC42BPA-210ENST00000462553 OR5D16Q8NGK9 328 aa7.12□□□□□ -1.27
CDC42BPA-210ENST00000462553 OR4A15Q8NGL6 344 aa7.12□□□□□ -1.27
CDC42BPA-210ENST00000462553 OR9I1Q8NGQ6 314 aa7.12□□□□□ -1.27
CDC42BPA-210ENST00000462553 GPR151Q8TDV0 419 aa7.12□□□□□ -1.27
CDC42BPA-210ENST00000462553 JADE3Q92613 823 aa7.12□□□□□ -1.27
CDC42BPA-210ENST00000462553 PIGTQ969N2 578 aa7.12□□□□□ -1.27
CDC42BPA-210ENST00000462553 PIK3IP1Q96FE7 263 aa7.12□□□□□ -1.27
CDC42BPA-210ENST00000462553 PERPQ96FX8 193 aa7.12□□□□□ -1.27
CDC42BPA-210ENST00000462553 SLC35G5Q96KT7 338 aa7.12□□□□□ -1.27
CDC42BPA-210ENST00000462553 MAGEB18Q96M61 343 aa7.12□□□□□ -1.27
CDC42BPA-210ENST00000462553 SFXN2Q96NB2 322 aa7.12□□□□□ -1.27
CDC42BPA-210ENST00000462553 CCDC115Q96NT0 180 aa7.12□□□□□ -1.27
CDC42BPA-210ENST00000462553 OR7D2Q96RA2 312 aa7.12□□□□□ -1.27
CDC42BPA-210ENST00000462553 CCL19Q99731 98 aa7.12□□□□□ -1.27
CDC42BPA-210ENST00000462553 EBF4Q9BQW3 602 aa7.12□□□□□ -1.27
CDC42BPA-210ENST00000462553 BTBD2Q9BX70 525 aa7.12□□□□□ -1.27
CDC42BPA-210ENST00000462553 ACTRT3Q9BYD9 372 aa7.12□□□□□ -1.27
CDC42BPA-210ENST00000462553 OPN3Q9H1Y3 402 aaPredicted RBP7.12□□□□□ -1.27
CDC42BPA-210ENST00000462553 UBTD1Q9HAC8 227 aa7.12□□□□□ -1.27
CDC42BPA-210ENST00000462553 SDR39U1Q9NRG7 319 aaPredicted RBP7.12□□□□□ -1.27
CDC42BPA-210ENST00000462553 INTS9Q9NV88 658 aaKnown RBP7.12□□□□□ -1.27
CDC42BPA-210ENST00000462553 GIN1Q9NXP7 522 aa7.12□□□□□ -1.27
CDC42BPA-210ENST00000462553 MRPS18CQ9Y3D5 142 aaKnown RBP7.12□□□□□ -1.27
CDC42BPA-210ENST00000462553 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.11□□□□□ -1.27
CDC42BPA-210ENST00000462553 ALPK2Q86TB3 2170 aa7.11□□□□□ -1.27
CDC42BPA-210ENST00000462553 PRSS51A0A1B0GVH4 220 aa7.11□□□□□ -1.27
CDC42BPA-210ENST00000462553 PRAMEF27A3QJZ7 478 aa7.11□□□□□ -1.27
CDC42BPA-210ENST00000462553 SLC22A20A6NK97 555 aa7.11□□□□□ -1.27
CDC42BPA-210ENST00000462553 ALG1L2C9J202 215 aa7.11□□□□□ -1.27
CDC42BPA-210ENST00000462553 NPIPB9F8W1W9 429 aa7.11□□□□□ -1.27
CDC42BPA-210ENST00000462553 H0YC42 278 aa7.11□□□□□ -1.27
CDC42BPA-210ENST00000462553 SMAD7O15105 426 aaKnown RBP7.11□□□□□ -1.27
CDC42BPA-210ENST00000462553 CFLARO15519 480 aa7.11□□□□□ -1.27
CDC42BPA-210ENST00000462553 OIP5O43482 229 aa7.11□□□□□ -1.27
CDC42BPA-210ENST00000462553 PGRP06401 933 aa7.11□□□□□ -1.27
CDC42BPA-210ENST00000462553 CRHP06850 196 aa7.11□□□□□ -1.27
CDC42BPA-210ENST00000462553 IDO1P14902 403 aa7.11□□□□□ -1.27
CDC42BPA-210ENST00000462553 HOXB9P17482 250 aaPredicted RBP7.11□□□□□ -1.27
CDC42BPA-210ENST00000462553 S100A3P33764 101 aa7.11□□□□□ -1.27
CDC42BPA-210ENST00000462553 GCKP35557 465 aa7.11□□□□□ -1.27
CDC42BPA-210ENST00000462553 UGT2B10P36537 528 aa7.11□□□□□ -1.27
CDC42BPA-210ENST00000462553 RFX3P48380 749 aa7.11□□□□□ -1.27
CDC42BPA-210ENST00000462553 PTH2RP49190 550 aa7.11□□□□□ -1.27
CDC42BPA-210ENST00000462553 IDH3AP50213 366 aa7.11□□□□□ -1.27
CDC42BPA-210ENST00000462553 SUCLG1P53597 346 aaKnown RBP7.11□□□□□ -1.27
CDC42BPA-210ENST00000462553 PSMD4P55036 377 aaKnown RBP7.11□□□□□ -1.27
CDC42BPA-210ENST00000462553 TPD52P55327 224 aaPredicted RBP7.11□□□□□ -1.27
CDC42BPA-210ENST00000462553 POU6F2P78424 691 aaPredicted RBP7.11□□□□□ -1.27
CDC42BPA-210ENST00000462553 STX5Q13190 355 aa7.11□□□□□ -1.27
CDC42BPA-210ENST00000462553 CAPRIN1Q14444 709 aaKnown RBP7.11□□□□□ -1.27
CDC42BPA-210ENST00000462553 CD226Q15762 336 aa7.11□□□□□ -1.27
CDC42BPA-210ENST00000462553 ACKR1Q16570 336 aa7.11□□□□□ -1.27
CDC42BPA-210ENST00000462553 GSTA3Q16772 222 aa7.11□□□□□ -1.27
CDC42BPA-210ENST00000462553 TMEM44Q2T9K0 475 aa7.11□□□□□ -1.27
CDC42BPA-210ENST00000462553 SPDYE7PQ495Y7 208 aa7.11□□□□□ -1.27
CDC42BPA-210ENST00000462553 DCST2Q5T1A1 773 aa7.11□□□□□ -1.27
CDC42BPA-210ENST00000462553 DDX59Q5T1V6 619 aaKnown RBP eCLIP7.11□□□□□ -1.27
CDC42BPA-210ENST00000462553 NXNQ6DKJ4 435 aa7.11□□□□□ -1.27
CDC42BPA-210ENST00000462553 AAGABQ6PD74 315 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms