RNA–Protein interactions for RNA: ENST00000461127.5

TOP3A-202, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-202ENST00000461127 VDAC3Q9Y277 283 aa15.29■□□□□ 0.04
TOP3A-202ENST00000461127 SVEP1Q4LDE5 3571 aa15.29■□□□□ 0.04
TOP3A-202ENST00000461127 PLCE1Q9P212 2302 aa15.28■□□□□ 0.04
TOP3A-202ENST00000461127 GMNCA6NCL1 334 aa15.28■□□□□ 0.04
TOP3A-202ENST00000461127 ADAMDEC1O15204 470 aa15.28■□□□□ 0.04
TOP3A-202ENST00000461127 NDUFB5O43674 189 aa15.28■□□□□ 0.04
TOP3A-202ENST00000461127 GMFGO60234 142 aa15.28■□□□□ 0.04
TOP3A-202ENST00000461127 EDF1O60869 148 aaKnown RBP15.28■□□□□ 0.04
TOP3A-202ENST00000461127 PTNP21246 168 aa15.28■□□□□ 0.04
TOP3A-202ENST00000461127 PSMD4P55036 377 aaKnown RBP15.28■□□□□ 0.04
TOP3A-202ENST00000461127 PKNOX1P55347 436 aa15.28■□□□□ 0.04
TOP3A-202ENST00000461127 CBX1P83916 185 aa15.28■□□□□ 0.04
TOP3A-202ENST00000461127 GALNT1Q10472 559 aaPredicted RBP15.28■□□□□ 0.04
TOP3A-202ENST00000461127 ITGADQ13349 1161 aa15.28■□□□□ 0.04
TOP3A-202ENST00000461127 SGO1Q5FBB7 561 aa15.28■□□□□ 0.04
TOP3A-202ENST00000461127 HBMQ6B0K9 141 aa15.28■□□□□ 0.04
TOP3A-202ENST00000461127 TFAP2EQ6VUC0 442 aa15.28■□□□□ 0.04
TOP3A-202ENST00000461127 SSX8Q7RTT4 187 aa15.28■□□□□ 0.04
TOP3A-202ENST00000461127 MARCH3Q86UD3 253 aa15.28■□□□□ 0.04
TOP3A-202ENST00000461127 KIRREL3Q8IZU9 778 aa15.28■□□□□ 0.04
TOP3A-202ENST00000461127 MUCL1Q96DR8 90 aa15.28■□□□□ 0.04
TOP3A-202ENST00000461127 ADGRG7Q96K78 797 aa15.28■□□□□ 0.04
TOP3A-202ENST00000461127 ZNF382Q96SR6 550 aa15.28■□□□□ 0.04
TOP3A-202ENST00000461127 HHATLQ9HCP6 504 aa15.28■□□□□ 0.04
TOP3A-202ENST00000461127 FGFR1OP2Q9NVK5 253 aa15.28■□□□□ 0.04
TOP3A-202ENST00000461127 NMRK1Q9NWW6 199 aa15.28■□□□□ 0.04
TOP3A-202ENST00000461127 EPB41L3Q9Y2J2 1087 aaPredicted RBP15.28■□□□□ 0.04
TOP3A-202ENST00000461127 RAP2CQ9Y3L5 183 aa15.28■□□□□ 0.04
TOP3A-202ENST00000461127 A0A087WZY1 265 aa15.27■□□□□ 0.04
TOP3A-202ENST00000461127 LOC100289279A0A1B0GTE1 492 aa15.27■□□□□ 0.04
TOP3A-202ENST00000461127 SHISA9B4DS77 424 aa15.27■□□□□ 0.04
TOP3A-202ENST00000461127 OR7A17O14581 309 aa15.27■□□□□ 0.04
TOP3A-202ENST00000461127 ABCD4O14678 606 aa15.27■□□□□ 0.04
TOP3A-202ENST00000461127 TNFSF11O14788 317 aa15.27■□□□□ 0.04
TOP3A-202ENST00000461127 KIAA0513O60268 411 aa15.27■□□□□ 0.04
TOP3A-202ENST00000461127 PLOD3O60568 738 aa15.27■□□□□ 0.04
TOP3A-202ENST00000461127 SHOX2O60902 331 aaPredicted RBP15.27■□□□□ 0.04
TOP3A-202ENST00000461127 COQ9O75208 318 aa15.27■□□□□ 0.04
TOP3A-202ENST00000461127 ADAP00813 363 aa15.27■□□□□ 0.04
TOP3A-202ENST00000461127 ARRB2P32121 409 aa15.27■□□□□ 0.04
TOP3A-202ENST00000461127 TTKP33981 857 aa15.27■□□□□ 0.04
TOP3A-202ENST00000461127 SEC24CP53992 1094 aa15.27■□□□□ 0.04
TOP3A-202ENST00000461127 RAC1P63000 192 aa15.27■□□□□ 0.04
TOP3A-202ENST00000461127 PSG6Q00889 435 aa15.27■□□□□ 0.04
TOP3A-202ENST00000461127 PPA1Q15181 289 aa15.27■□□□□ 0.04
TOP3A-202ENST00000461127 RNPS1Q15287 305 aaKnown RBP15.27■□□□□ 0.04
TOP3A-202ENST00000461127 STK11Q15831 433 aa15.27■□□□□ 0.04
TOP3A-202ENST00000461127 BHLHB9Q6PI77 547 aa15.27■□□□□ 0.04
TOP3A-202ENST00000461127 BHLHA15Q7RTS1 189 aaPredicted RBP15.27■□□□□ 0.04
TOP3A-202ENST00000461127 CPLX4Q7Z7G2 160 aa15.27■□□□□ 0.04
TOP3A-202ENST00000461127 MEX3DQ86XN8 651 aaKnown RBP15.27■□□□□ 0.04
TOP3A-202ENST00000461127 FBXL14Q8N1E6 418 aa15.27■□□□□ 0.04
TOP3A-202ENST00000461127 RFLNBQ8N5W9 214 aa15.27■□□□□ 0.04
TOP3A-202ENST00000461127 AGR3Q8TD06 166 aa15.27■□□□□ 0.04
TOP3A-202ENST00000461127 C10orf105Q8TEF2 133 aa15.27■□□□□ 0.04
TOP3A-202ENST00000461127 ZNF317Q96PQ6 595 aaPredicted RBP15.27■□□□□ 0.04
TOP3A-202ENST00000461127 SORT1Q99523 831 aa15.27■□□□□ 0.04
TOP3A-202ENST00000461127 RTN4RQ9BZR6 473 aa15.27■□□□□ 0.04
TOP3A-202ENST00000461127 FAM107BQ9H098 131 aa15.27■□□□□ 0.04
TOP3A-202ENST00000461127 FLRT3Q9NZU0 649 aa15.27■□□□□ 0.04
TOP3A-202ENST00000461127 IGLV3-32A0A0A0MS00 114 aa15.26■□□□□ 0.03
TOP3A-202ENST00000461127 PPP6CO00743 305 aa15.26■□□□□ 0.03
TOP3A-202ENST00000461127 TCF21O43680 179 aa15.26■□□□□ 0.03
TOP3A-202ENST00000461127 ANGPTL1O95841 491 aa15.26■□□□□ 0.03
TOP3A-202ENST00000461127 OPN1LWP04000 364 aa15.26■□□□□ 0.03
TOP3A-202ENST00000461127 TROVE2P10155 538 aaKnown RBP eCLIP15.26■□□□□ 0.03
TOP3A-202ENST00000461127 BMP4P12644 408 aa15.26■□□□□ 0.03
TOP3A-202ENST00000461127 MPIP34949 423 aa15.26■□□□□ 0.03
TOP3A-202ENST00000461127 RPL14P50914 215 aaKnown RBP15.26■□□□□ 0.03
TOP3A-202ENST00000461127 SEZ6L2Q6UXD5 910 aa15.26■□□□□ 0.03
TOP3A-202ENST00000461127 FAM9CQ8IZT9 166 aa15.26■□□□□ 0.03
TOP3A-202ENST00000461127 GTPBP8Q8N3Z3 284 aaPredicted RBP15.26■□□□□ 0.03
TOP3A-202ENST00000461127 ZNF781Q8N8C0 355 aa15.26■□□□□ 0.03
TOP3A-202ENST00000461127 OSTF1Q92882 214 aa15.26■□□□□ 0.03
TOP3A-202ENST00000461127 EXOSC8Q96B26 276 aaKnown RBP15.26■□□□□ 0.03
TOP3A-202ENST00000461127 HBEGFQ99075 208 aa15.26■□□□□ 0.03
TOP3A-202ENST00000461127 C20orf27Q9GZN8 174 aa15.26■□□□□ 0.03
TOP3A-202ENST00000461127 Q9N2J8 555 aa15.26■□□□□ 0.03
TOP3A-202ENST00000461127 TIGARQ9NQ88 270 aa15.26■□□□□ 0.03
TOP3A-202ENST00000461127 KLHL13Q9P2N7 655 aa15.26■□□□□ 0.03
TOP3A-202ENST00000461127 MARCOQ9UEW3 520 aaPredicted RBP15.26■□□□□ 0.03
TOP3A-202ENST00000461127 POU2F3Q9UKI9 436 aa15.26■□□□□ 0.03
TOP3A-202ENST00000461127 AZIN1O14977 448 aa15.25■□□□□ 0.03
TOP3A-202ENST00000461127 OR4F21O95013 312 aa15.25■□□□□ 0.03
TOP3A-202ENST00000461127 IL33O95760 270 aa15.25■□□□□ 0.03
TOP3A-202ENST00000461127 CHEK2O96017 543 aa15.25■□□□□ 0.03
TOP3A-202ENST00000461127 ENO1P06733 434 aaKnown RBP15.25■□□□□ 0.03
TOP3A-202ENST00000461127 KITP10721 976 aa15.25■□□□□ 0.03
TOP3A-202ENST00000461127 CFPP27918 469 aa15.25■□□□□ 0.03
TOP3A-202ENST00000461127 RFX3P48380 749 aa15.25■□□□□ 0.03
TOP3A-202ENST00000461127 CARD18P57730 90 aa15.25■□□□□ 0.03
TOP3A-202ENST00000461127 TRAF3Q13114 568 aa15.25■□□□□ 0.03
TOP3A-202ENST00000461127 ZNHIT3Q15649 155 aaPredicted RBP15.25■□□□□ 0.03
TOP3A-202ENST00000461127 C11orf71Q6IPW1 123 aa15.25■□□□□ 0.03
TOP3A-202ENST00000461127 NUFIP2Q7Z417 695 aaKnown RBP15.25■□□□□ 0.03
TOP3A-202ENST00000461127 PIAS4Q8N2W9 510 aaPredicted RBP15.25■□□□□ 0.03
TOP3A-202ENST00000461127 MUC15Q8N387 334 aa15.25■□□□□ 0.03
TOP3A-202ENST00000461127 OR7G2Q8NG99 324 aa15.25■□□□□ 0.03
TOP3A-202ENST00000461127 OR4F6Q8NGB9 312 aa15.25■□□□□ 0.03
TOP3A-202ENST00000461127 HTRA1Q92743 480 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms