RNA–Protein interactions for RNA: ENST00000456385.5

CLIP4-208, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 2

Gene CLIP4, Length 2,311 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-208ENST00000456385 GLDNQ6ZMI3 551 aaPredicted RBP9.59□□□□□ -0.87
CLIP4-208ENST00000456385 TMUB2Q71RG4 321 aa9.59□□□□□ -0.87
CLIP4-208ENST00000456385 MEPCEQ7L2J0 689 aaKnown RBP9.59□□□□□ -0.87
CLIP4-208ENST00000456385 PAQR7Q86WK9 346 aa9.59□□□□□ -0.87
CLIP4-208ENST00000456385 FAM129CQ86XR2 697 aa9.59□□□□□ -0.87
CLIP4-208ENST00000456385 RFLNBQ8N5W9 214 aa9.59□□□□□ -0.87
CLIP4-208ENST00000456385 RELL2Q8NC24 303 aaPredicted RBP9.59□□□□□ -0.87
CLIP4-208ENST00000456385 KISS1RQ969F8 398 aaPredicted RBP9.59□□□□□ -0.87
CLIP4-208ENST00000456385 GLYATL1Q969I3 302 aa9.59□□□□□ -0.87
CLIP4-208ENST00000456385 LCORQ96JN0 433 aaPredicted RBP9.59□□□□□ -0.87
CLIP4-208ENST00000456385 AMDHD1Q96NU7 426 aa9.59□□□□□ -0.87
CLIP4-208ENST00000456385 CASD1Q96PB1 797 aa9.59□□□□□ -0.87
CLIP4-208ENST00000456385 DERL3Q96Q80 235 aa9.59□□□□□ -0.87
CLIP4-208ENST00000456385 SLC38A3Q99624 504 aa9.59□□□□□ -0.87
CLIP4-208ENST00000456385 PELOQ9BRX2 385 aaKnown RBP9.59□□□□□ -0.87
CLIP4-208ENST00000456385 NDC1Q9BTX1 674 aa9.59□□□□□ -0.87
CLIP4-208ENST00000456385 TEX12Q9BXU0 123 aa9.59□□□□□ -0.87
CLIP4-208ENST00000456385 SLC6A17Q9H1V8 727 aa9.59□□□□□ -0.87
CLIP4-208ENST00000456385 OR51V1Q9H2C8 321 aa9.59□□□□□ -0.87
CLIP4-208ENST00000456385 MTG2Q9H4K7 406 aa9.59□□□□□ -0.87
CLIP4-208ENST00000456385 NANSQ9NR45 359 aa9.59□□□□□ -0.87
CLIP4-208ENST00000456385 MED17Q9NVC6 651 aa9.59□□□□□ -0.87
CLIP4-208ENST00000456385 PRELID3BQ9Y3B1 194 aa9.59□□□□□ -0.87
CLIP4-208ENST00000456385 A0A1W2PS29 197 aa9.58□□□□□ -0.88
CLIP4-208ENST00000456385 OR2M5A3KFT3 312 aa9.58□□□□□ -0.88
CLIP4-208ENST00000456385 KLF4O43474 513 aa9.58□□□□□ -0.88
CLIP4-208ENST00000456385 GSTZ1O43708 216 aaPredicted RBP9.58□□□□□ -0.88
CLIP4-208ENST00000456385 KCNJ13O60928 360 aa9.58□□□□□ -0.88
CLIP4-208ENST00000456385 SDC3O75056 442 aa9.58□□□□□ -0.88
CLIP4-208ENST00000456385 PTP4A3O75365 173 aa9.58□□□□□ -0.88
CLIP4-208ENST00000456385 POP4O95707 220 aaKnown RBP9.58□□□□□ -0.88
CLIP4-208ENST00000456385 LDOC1O95751 146 aaPredicted RBP9.58□□□□□ -0.88
CLIP4-208ENST00000456385 IGF2P01344 180 aa9.58□□□□□ -0.88
CLIP4-208ENST00000456385 STATHP02808 62 aa9.58□□□□□ -0.88
CLIP4-208ENST00000456385 MT-ND5P03915 603 aa9.58□□□□□ -0.88
CLIP4-208ENST00000456385 GALTP07902 379 aa9.58□□□□□ -0.88
CLIP4-208ENST00000456385 GIPP09681 153 aaPredicted RBP9.58□□□□□ -0.88
CLIP4-208ENST00000456385 GABRA1P14867 456 aa9.58□□□□□ -0.88
CLIP4-208ENST00000456385 NDUFV2P19404 249 aa9.58□□□□□ -0.88
CLIP4-208ENST00000456385 PYCR1P32322 319 aa9.58□□□□□ -0.88
CLIP4-208ENST00000456385 AKR1D1P51857 326 aa9.58□□□□□ -0.88
CLIP4-208ENST00000456385 NCBP2P52298 156 aaKnown RBP eCLIP9.58□□□□□ -0.88
CLIP4-208ENST00000456385 HCCSP53701 268 aa9.58□□□□□ -0.88
CLIP4-208ENST00000456385 EIF2B5Q13144 721 aaKnown RBP9.58□□□□□ -0.88
CLIP4-208ENST00000456385 FGL2Q14314 439 aa9.58□□□□□ -0.88
CLIP4-208ENST00000456385 C2orf68Q2NKX9 166 aa9.58□□□□□ -0.88
CLIP4-208ENST00000456385 TMEM44Q2T9K0 475 aa9.58□□□□□ -0.88
CLIP4-208ENST00000456385 C6orf132Q5T0Z8 1188 aa9.58□□□□□ -0.88
CLIP4-208ENST00000456385 SLC8B1Q6J4K2 584 aa9.58□□□□□ -0.88
CLIP4-208ENST00000456385 SSX6Q7RTT6 188 aa9.58□□□□□ -0.88
CLIP4-208ENST00000456385 TRMT11Q7Z4G4 463 aaKnown RBP9.58□□□□□ -0.88
CLIP4-208ENST00000456385 TRAM1L1Q8N609 369 aa9.58□□□□□ -0.88
CLIP4-208ENST00000456385 SUN3Q8TAQ9 357 aa9.58□□□□□ -0.88
CLIP4-208ENST00000456385 ZNF671Q8TAW3 534 aa9.58□□□□□ -0.88
CLIP4-208ENST00000456385 ZNF707Q96C28 371 aaPredicted RBP9.58□□□□□ -0.88
CLIP4-208ENST00000456385 LRRC46Q96FV0 321 aa9.58□□□□□ -0.88
CLIP4-208ENST00000456385 FERD3LQ96RJ6 166 aa9.58□□□□□ -0.88
CLIP4-208ENST00000456385 FAM83CQ9BQN1 747 aa9.58□□□□□ -0.88
CLIP4-208ENST00000456385 PINK1Q9BXM7 581 aa9.58□□□□□ -0.88
CLIP4-208ENST00000456385 ZCCHC2Q9C0B9 1178 aaKnown RBP9.58□□□□□ -0.88
CLIP4-208ENST00000456385 ANKRD19PQ9H560 264 aa9.58□□□□□ -0.88
CLIP4-208ENST00000456385 CCDC86Q9H6F5 360 aaKnown RBP9.58□□□□□ -0.88
CLIP4-208ENST00000456385 SCPEP1Q9HB40 452 aa9.58□□□□□ -0.88
CLIP4-208ENST00000456385 BCL2L10Q9HD36 194 aa9.58□□□□□ -0.88
CLIP4-208ENST00000456385 EQTNQ9NQ60 294 aa9.58□□□□□ -0.88
CLIP4-208ENST00000456385 AHSPQ9NZD4 102 aa9.58□□□□□ -0.88
CLIP4-208ENST00000456385 FBXL4Q9UKA2 621 aa9.58□□□□□ -0.88
CLIP4-208ENST00000456385 PCDHGA9Q9Y5G4 932 aaKnown RBP9.58□□□□□ -0.88
CLIP4-208ENST00000456385 NPFFR2Q9Y5X5 522 aa9.58□□□□□ -0.88
CLIP4-208ENST00000456385 FRMPD3Q5JV73 1810 aa9.58□□□□□ -0.88
CLIP4-208ENST00000456385 GOLGA4Q13439 2230 aaKnown RBP9.58□□□□□ -0.88
CLIP4-208ENST00000456385 FXYD6-FXYD2A0A087WZ82 144 aa9.57□□□□□ -0.88
CLIP4-208ENST00000456385 CDHR4A6H8M9 788 aa9.57□□□□□ -0.88
CLIP4-208ENST00000456385 D6RAR5 112 aa9.57□□□□□ -0.88
CLIP4-208ENST00000456385 PRAF2O60831 178 aa9.57□□□□□ -0.88
CLIP4-208ENST00000456385 SPDEFO95238 335 aa9.57□□□□□ -0.88
CLIP4-208ENST00000456385 FGBP02675 491 aa9.57□□□□□ -0.88
CLIP4-208ENST00000456385 IL9P15248 144 aa9.57□□□□□ -0.88
CLIP4-208ENST00000456385 H2BFSP57053 126 aa9.57□□□□□ -0.88
CLIP4-208ENST00000456385 FXYD6P3P58550 94 aa9.57□□□□□ -0.88
CLIP4-208ENST00000456385 UBE2MP61081 183 aaKnown RBP9.57□□□□□ -0.88
CLIP4-208ENST00000456385 LINC00303Q3SY05 128 aa9.57□□□□□ -0.88
CLIP4-208ENST00000456385 PRAMEF14Q5SWL7 426 aa9.57□□□□□ -0.88
CLIP4-208ENST00000456385 PRPF38BQ5VTL8 546 aaKnown RBP9.57□□□□□ -0.88
CLIP4-208ENST00000456385 PRAMEF13Q5VWM6 474 aa9.57□□□□□ -0.88
CLIP4-208ENST00000456385 GDPD4Q6W3E5 623 aa9.57□□□□□ -0.88
CLIP4-208ENST00000456385 GDF7Q7Z4P5 450 aa9.57□□□□□ -0.88
CLIP4-208ENST00000456385 ADCK2Q7Z695 626 aa9.57□□□□□ -0.88
CLIP4-208ENST00000456385 SPICQ8N5J4 248 aa9.57□□□□□ -0.88
CLIP4-208ENST00000456385 FAM71CQ8NEG0 241 aa9.57□□□□□ -0.88
CLIP4-208ENST00000456385 OR5M1Q8NGP8 315 aa9.57□□□□□ -0.88
CLIP4-208ENST00000456385 FIBINQ8TAL6 211 aa9.57□□□□□ -0.88
CLIP4-208ENST00000456385 ZDHHC1Q8WTX9 485 aa9.57□□□□□ -0.88
CLIP4-208ENST00000456385 ACOT11Q8WXI4 607 aaPredicted RBP9.57□□□□□ -0.88
CLIP4-208ENST00000456385 IFT27Q9BW83 186 aa9.57□□□□□ -0.88
CLIP4-208ENST00000456385 CPEB1Q9BZB8 566 aaKnown RBP9.57□□□□□ -0.88
CLIP4-208ENST00000456385 DPH1Q9BZG8 443 aa9.57□□□□□ -0.88
CLIP4-208ENST00000456385 FXYD6Q9H0Q3 95 aa9.57□□□□□ -0.88
CLIP4-208ENST00000456385 EMC3Q9P0I2 261 aa9.57□□□□□ -0.88
CLIP4-208ENST00000456385 SLC13A4Q9UKG4 626 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms