RNA–Protein interactions for RNA: ENST00000453705.1

BRCC3-208, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 5

Gene BRCC3, Length 2,694 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-208ENST00000453705 COG4Q9H9E3 785 aa7.22□□□□□ -1.25
BRCC3-208ENST00000453705 TAS2R1Q9NYW7 299 aa7.22□□□□□ -1.25
BRCC3-208ENST00000453705 ADA2Q9NZK5 511 aa7.22□□□□□ -1.25
BRCC3-208ENST00000453705 KCTD3Q9Y597 815 aa7.22□□□□□ -1.25
BRCC3-208ENST00000453705 MCIDASD6RGH6 385 aa7.22□□□□□ -1.25
BRCC3-208ENST00000453705 WIPF1O43516 503 aa7.22□□□□□ -1.25
BRCC3-208ENST00000453705 SNAP91O60641 907 aa7.22□□□□□ -1.25
BRCC3-208ENST00000453705 NOS1APO75052 506 aaPredicted RBP7.22□□□□□ -1.25
BRCC3-208ENST00000453705 CCNKO75909 580 aa7.22□□□□□ -1.25
BRCC3-208ENST00000453705 SMIM18P0DKX4 95 aa7.22□□□□□ -1.25
BRCC3-208ENST00000453705 XRCC1P18887 633 aaPredicted RBP7.22□□□□□ -1.25
BRCC3-208ENST00000453705 PPP2R1BP30154 601 aa7.22□□□□□ -1.25
BRCC3-208ENST00000453705 APOBEC3AP31941 199 aaPredicted RBP7.22□□□□□ -1.25
BRCC3-208ENST00000453705 BMP8BP34820 402 aa7.22□□□□□ -1.25
BRCC3-208ENST00000453705 OMPP47874 163 aa7.22□□□□□ -1.25
BRCC3-208ENST00000453705 CHN2P52757 468 aa7.22□□□□□ -1.25
BRCC3-208ENST00000453705 RAD51Q06609 339 aa7.22□□□□□ -1.25
BRCC3-208ENST00000453705 BCL2L1Q07817 233 aa7.22□□□□□ -1.25
BRCC3-208ENST00000453705 TSPAN31Q12999 210 aa7.22□□□□□ -1.25
BRCC3-208ENST00000453705 TRMT5Q32P41 509 aaKnown RBP7.22□□□□□ -1.25
BRCC3-208ENST00000453705 UNC50Q53HI1 259 aa7.22□□□□□ -1.25
BRCC3-208ENST00000453705 ARL13AQ5H913 290 aaPredicted RBP7.22□□□□□ -1.25
BRCC3-208ENST00000453705 NIPAL1Q6NVV3 410 aa7.22□□□□□ -1.25
BRCC3-208ENST00000453705 UGT2A3Q6UWM9 527 aa7.22□□□□□ -1.25
BRCC3-208ENST00000453705 IZUMO2Q6UXV1 221 aa7.22□□□□□ -1.25
BRCC3-208ENST00000453705 ZCCHC23Q6ZST2 131 aa7.22□□□□□ -1.25
BRCC3-208ENST00000453705 TRAM1L1Q8N609 369 aa7.22□□□□□ -1.25
BRCC3-208ENST00000453705 LRRC17Q8N6Y2 441 aa7.22□□□□□ -1.25
BRCC3-208ENST00000453705 OR4K2Q8NGD2 314 aa7.22□□□□□ -1.25
BRCC3-208ENST00000453705 SNX33Q8WV41 574 aa7.22□□□□□ -1.25
BRCC3-208ENST00000453705 SCRN2Q96FV2 425 aa7.22□□□□□ -1.25
BRCC3-208ENST00000453705 MCRIP2Q9BUT9 160 aaKnown RBP7.22□□□□□ -1.25
BRCC3-208ENST00000453705 HOXD1Q9GZZ0 328 aa7.22□□□□□ -1.25
BRCC3-208ENST00000453705 ATXN3LQ9H3M9 355 aa7.22□□□□□ -1.25
BRCC3-208ENST00000453705 METTL8Q9H825 291 aaKnown RBP7.22□□□□□ -1.25
BRCC3-208ENST00000453705 C19orf12Q9NSK7 152 aa7.22□□□□□ -1.25
BRCC3-208ENST00000453705 GID8Q9NWU2 228 aa7.22□□□□□ -1.25
BRCC3-208ENST00000453705 APOBEC3BQ9UH17 382 aaKnown RBP7.22□□□□□ -1.25
BRCC3-208ENST00000453705 V9GYQ6 96 aa7.22□□□□□ -1.25
BRCC3-208ENST00000453705 DNAH12Q6ZR08 3092 aa7.22□□□□□ -1.25
BRCC3-208ENST00000453705 A0A0A6YYH2 397 aa7.21□□□□□ -1.25
BRCC3-208ENST00000453705 CCDC195A0A1B0GUA6 201 aa7.21□□□□□ -1.25
BRCC3-208ENST00000453705 A6NJ64 397 aa7.21□□□□□ -1.25
BRCC3-208ENST00000453705 SLC16A5O15375 505 aa7.21□□□□□ -1.25
BRCC3-208ENST00000453705 STX7O15400 261 aaKnown RBP7.21□□□□□ -1.25
BRCC3-208ENST00000453705 CISD3P0C7P0 127 aa7.21□□□□□ -1.25
BRCC3-208ENST00000453705 ELFN1P0C7U0 828 aa7.21□□□□□ -1.25
BRCC3-208ENST00000453705 CDH2P19022 906 aaPredicted RBP7.21□□□□□ -1.25
BRCC3-208ENST00000453705 ANXA7P20073 488 aaKnown RBP7.21□□□□□ -1.25
BRCC3-208ENST00000453705 GKP32189 559 aa7.21□□□□□ -1.25
BRCC3-208ENST00000453705 CCR2P41597 374 aa7.21□□□□□ -1.25
BRCC3-208ENST00000453705 DHODHQ02127 395 aa7.21□□□□□ -1.25
BRCC3-208ENST00000453705 SHBQ15464 509 aa7.21□□□□□ -1.25
BRCC3-208ENST00000453705 CARD16Q5EG05 197 aa7.21□□□□□ -1.25
BRCC3-208ENST00000453705 GPR107Q5VW38 600 aa7.21□□□□□ -1.25
BRCC3-208ENST00000453705 PMS2CLQ68D20 193 aa7.21□□□□□ -1.25
BRCC3-208ENST00000453705 DHRS7BQ6IAN0 325 aaPredicted RBP7.21□□□□□ -1.25
BRCC3-208ENST00000453705 FAM109BQ6ICB4 259 aaPredicted RBP7.21□□□□□ -1.25
BRCC3-208ENST00000453705 FAM151BQ6UXP7 276 aa7.21□□□□□ -1.25
BRCC3-208ENST00000453705 GPRIN3Q6ZVF9 776 aa7.21□□□□□ -1.25
BRCC3-208ENST00000453705 PRICKLE2Q7Z3G6 844 aa7.21□□□□□ -1.25
BRCC3-208ENST00000453705 APCDD1Q8J025 514 aa7.21□□□□□ -1.25
BRCC3-208ENST00000453705 ZFP28Q8NHY6 868 aa7.21□□□□□ -1.25
BRCC3-208ENST00000453705 PHOSPHO1Q8TCT1 267 aa7.21□□□□□ -1.25
BRCC3-208ENST00000453705 CD200R1Q8TD46 325 aa7.21□□□□□ -1.25
BRCC3-208ENST00000453705 GTF2H4Q92759 462 aa7.21□□□□□ -1.25
BRCC3-208ENST00000453705 IRF7Q92985 503 aa7.21□□□□□ -1.25
BRCC3-208ENST00000453705 SLC25A36Q96CQ1 311 aa7.21□□□□□ -1.25
BRCC3-208ENST00000453705 DOCK6Q96HP0 2047 aa7.21□□□□□ -1.25
BRCC3-208ENST00000453705 FOXN4Q96NZ1 517 aa7.21□□□□□ -1.25
BRCC3-208ENST00000453705 EBF4Q9BQW3 602 aa7.21□□□□□ -1.25
BRCC3-208ENST00000453705 POMKQ9H5K3 350 aa7.21□□□□□ -1.25
BRCC3-208ENST00000453705 LPAR2Q9HBW0 351 aa7.21□□□□□ -1.25
BRCC3-208ENST00000453705 SPHK2Q9NRA0 654 aa7.21□□□□□ -1.25
BRCC3-208ENST00000453705 SLC6A13Q9NSD5 602 aa7.21□□□□□ -1.25
BRCC3-208ENST00000453705 SLC25A13Q9UJS0 675 aa7.21□□□□□ -1.25
BRCC3-208ENST00000453705 CMAHPQ9Y471 501 aa7.21□□□□□ -1.25
BRCC3-208ENST00000453705 ZNF175Q9Y473 711 aa7.21□□□□□ -1.25
BRCC3-208ENST00000453705 PIKFYVEQ9Y2I7 2098 aa7.21□□□□□ -1.26
BRCC3-208ENST00000453705 OR2AT4A6NND4 320 aa7.21□□□□□ -1.26
BRCC3-208ENST00000453705 C2orf74A8MZ97 194 aa7.21□□□□□ -1.26
BRCC3-208ENST00000453705 PRMT5O14744 637 aaPredicted RBP7.21□□□□□ -1.26
BRCC3-208ENST00000453705 LRP3O75074 770 aa7.21□□□□□ -1.26
BRCC3-208ENST00000453705 CNOT3O75175 753 aaKnown RBP7.21□□□□□ -1.26
BRCC3-208ENST00000453705 GATBO75879 557 aaKnown RBP7.21□□□□□ -1.26
BRCC3-208ENST00000453705 AP2A2O94973 939 aa7.21□□□□□ -1.26
BRCC3-208ENST00000453705 AHSA1O95433 338 aa7.21□□□□□ -1.26
BRCC3-208ENST00000453705 MPC1LP0DKB6 136 aa7.21□□□□□ -1.26
BRCC3-208ENST00000453705 THRAP10827 490 aa7.21□□□□□ -1.26
BRCC3-208ENST00000453705 IRF1P10914 325 aa7.21□□□□□ -1.26
BRCC3-208ENST00000453705 ZNF28P17035 718 aa7.21□□□□□ -1.26
BRCC3-208ENST00000453705 PSMB5P28074 263 aa7.21□□□□□ -1.26
BRCC3-208ENST00000453705 TEAD1P28347 426 aa7.21□□□□□ -1.26
BRCC3-208ENST00000453705 TIA1P31483 386 aaKnown RBP eCLIP7.21□□□□□ -1.26
BRCC3-208ENST00000453705 PKNOX1P55347 436 aa7.21□□□□□ -1.26
BRCC3-208ENST00000453705 EGR3Q06889 387 aa7.21□□□□□ -1.26
BRCC3-208ENST00000453705 FLOT2Q14254 428 aa7.21□□□□□ -1.26
BRCC3-208ENST00000453705 FGFBP1Q14512 234 aa7.21□□□□□ -1.26
BRCC3-208ENST00000453705 TRAM2Q15035 370 aa7.21□□□□□ -1.26
BRCC3-208ENST00000453705 USF2Q15853 346 aaPredicted RBP7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms