RNA–Protein interactions for RNA: ENST00000448223.6

SMC6-207, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,233 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-207ENST00000448223 CDC20Q12834 499 aa8.69□□□□□ -1.02
SMC6-207ENST00000448223 FIGNL1Q6PIW4 674 aa8.69□□□□□ -1.02
SMC6-207ENST00000448223 TMEM207Q6UWW9 146 aa8.69□□□□□ -1.02
SMC6-207ENST00000448223 KRTCAP2Q8N6L1 136 aa8.69□□□□□ -1.02
SMC6-207ENST00000448223 OR10D4PQ8NGN7 298 aa8.69□□□□□ -1.02
SMC6-207ENST00000448223 USB1Q9BQ65 265 aaKnown RBP8.69□□□□□ -1.02
SMC6-207ENST00000448223 NMNAT2Q9BZQ4 307 aa8.69□□□□□ -1.02
SMC6-207ENST00000448223 SLC25A32Q9H2D1 315 aa8.69□□□□□ -1.02
SMC6-207ENST00000448223 THSD1Q9NS62 852 aa8.69□□□□□ -1.02
SMC6-207ENST00000448223 IL20Q9NYY1 176 aa8.69□□□□□ -1.02
SMC6-207ENST00000448223 CD84Q9UIB8 345 aa8.69□□□□□ -1.02
SMC6-207ENST00000448223 CLEC4EQ9ULY5 219 aa8.69□□□□□ -1.02
SMC6-207ENST00000448223 F2P00734 622 aa8.69□□□□□ -1.02
SMC6-207ENST00000448223 EBLN1P0CF75 366 aa8.69□□□□□ -1.02
SMC6-207ENST00000448223 CD1DP15813 335 aa8.69□□□□□ -1.02
SMC6-207ENST00000448223 RHOQP17081 205 aa8.69□□□□□ -1.02
SMC6-207ENST00000448223 PDX1P52945 283 aa8.69□□□□□ -1.02
SMC6-207ENST00000448223 HSF1Q00613 529 aa8.69□□□□□ -1.02
SMC6-207ENST00000448223 SELENBP1Q13228 472 aa8.69□□□□□ -1.02
SMC6-207ENST00000448223 PSAPL1Q6NUJ1 521 aa8.69□□□□□ -1.02
SMC6-207ENST00000448223 C1orf52Q8N6N3 182 aaKnown RBP8.69□□□□□ -1.02
SMC6-207ENST00000448223 OR6N2Q8NGY6 317 aa8.69□□□□□ -1.02
SMC6-207ENST00000448223 FAM213BQ8TBF2 198 aa8.69□□□□□ -1.02
SMC6-207ENST00000448223 RASD2Q96D21 266 aa8.69□□□□□ -1.02
SMC6-207ENST00000448223 OSER1Q9NX31 292 aa8.69□□□□□ -1.02
SMC6-207ENST00000448223 RASD1Q9Y272 281 aa8.69□□□□□ -1.02
SMC6-207ENST00000448223 WASH4PA8MWX3 477 aa8.68□□□□□ -1.02
SMC6-207ENST00000448223 HHLA1C9JL84 531 aa8.68□□□□□ -1.02
SMC6-207ENST00000448223 MANBAO00462 879 aa8.68□□□□□ -1.02
SMC6-207ENST00000448223 GABARAPO95166 117 aa8.68□□□□□ -1.02
SMC6-207ENST00000448223 ALPLP05186 524 aa8.68□□□□□ -1.02
SMC6-207ENST00000448223 ADRB3P13945 408 aa8.68□□□□□ -1.02
SMC6-207ENST00000448223 C5AR1P21730 350 aa8.68□□□□□ -1.02
SMC6-207ENST00000448223 CMPK1P30085 196 aa8.68□□□□□ -1.02
SMC6-207ENST00000448223 GABRA2P47869 451 aa8.68□□□□□ -1.02
SMC6-207ENST00000448223 GCGRP47871 477 aa8.68□□□□□ -1.02
SMC6-207ENST00000448223 GATMP50440 423 aa8.68□□□□□ -1.02
SMC6-207ENST00000448223 EPHB3P54753 998 aa8.68□□□□□ -1.02
SMC6-207ENST00000448223 BTG1P62324 171 aa8.68□□□□□ -1.02
SMC6-207ENST00000448223 YBX1P67809 324 aaKnown RBP8.68□□□□□ -1.02
SMC6-207ENST00000448223 MEF2DQ14814 521 aa8.68□□□□□ -1.02
SMC6-207ENST00000448223 TRIM61Q5EBN2 209 aa8.68□□□□□ -1.02
SMC6-207ENST00000448223 ZMAT1Q5H9K5 638 aa8.68□□□□□ -1.02
SMC6-207ENST00000448223 FAM209AQ5JX71 171 aa8.68□□□□□ -1.02
SMC6-207ENST00000448223 NADSYN1Q6IA69 706 aa8.68□□□□□ -1.02
SMC6-207ENST00000448223 C2orf73Q8N5S3 287 aaPredicted RBP8.68□□□□□ -1.02
SMC6-207ENST00000448223 SLC5A8Q8N695 610 aa8.68□□□□□ -1.02
SMC6-207ENST00000448223 PROKR1Q8TCW9 393 aa8.68□□□□□ -1.02
SMC6-207ENST00000448223 THAP4Q8WY91 577 aa8.68□□□□□ -1.02
SMC6-207ENST00000448223 IER2Q9BTL4 223 aa8.68□□□□□ -1.02
SMC6-207ENST00000448223 GCM1Q9NP62 436 aa8.68□□□□□ -1.02
SMC6-207ENST00000448223 ZNF586Q9NXT0 402 aa8.68□□□□□ -1.02
SMC6-207ENST00000448223 MED16Q9Y2X0 877 aa8.68□□□□□ -1.02
SMC6-207ENST00000448223 AKR1A1P14550 325 aa8.68□□□□□ -1.02
SMC6-207ENST00000448223 TACR2P21452 398 aa8.68□□□□□ -1.02
SMC6-207ENST00000448223 NAA10P41227 235 aaPredicted RBP8.68□□□□□ -1.02
SMC6-207ENST00000448223 RPL29P47914 159 aaKnown RBP8.68□□□□□ -1.02
SMC6-207ENST00000448223 RAB1AP62820 205 aa8.68□□□□□ -1.02
SMC6-207ENST00000448223 MBTPS1Q14703 1052 aa8.68□□□□□ -1.02
SMC6-207ENST00000448223 OR2T2Q6IF00 324 aa8.68□□□□□ -1.02
SMC6-207ENST00000448223 DPPA4Q7L190 304 aa8.68□□□□□ -1.02
SMC6-207ENST00000448223 KIAA0907Q7Z7F0 614 aaPredicted RBP8.68□□□□□ -1.02
SMC6-207ENST00000448223 B3GNT7Q8NFL0 401 aa8.68□□□□□ -1.02
SMC6-207ENST00000448223 OR52E4Q8NGH9 312 aa8.68□□□□□ -1.02
SMC6-207ENST00000448223 RANBP9Q96S59 729 aa8.68□□□□□ -1.02
SMC6-207ENST00000448223 TM7SF3Q9NS93 570 aa8.68□□□□□ -1.02
SMC6-207ENST00000448223 NCDNQ9UBB6 729 aa8.68□□□□□ -1.02
SMC6-207ENST00000448223 MIOXQ9UGB7 285 aa8.68□□□□□ -1.02
SMC6-207ENST00000448223 FBXO10Q9UK96 956 aa8.68□□□□□ -1.02
SMC6-207ENST00000448223 SLC22A23A1A5C7 686 aa8.68□□□□□ -1.02
SMC6-207ENST00000448223 P2RX6O15547 441 aa8.68□□□□□ -1.02
SMC6-207ENST00000448223 MMP7P09237 267 aaPredicted RBP8.68□□□□□ -1.02
SMC6-207ENST00000448223 IMPA1P29218 277 aa8.68□□□□□ -1.02
SMC6-207ENST00000448223 C21orf33P30042 268 aaPredicted RBP8.68□□□□□ -1.02
SMC6-207ENST00000448223 SOX9P48436 509 aa8.68□□□□□ -1.02
SMC6-207ENST00000448223 UBXN2BQ14CS0 331 aa8.68□□□□□ -1.02
SMC6-207ENST00000448223 RBMS2Q15434 407 aaKnown RBP8.68□□□□□ -1.02
SMC6-207ENST00000448223 PLBD1Q6P4A8 553 aa8.68□□□□□ -1.02
SMC6-207ENST00000448223 KCTD18Q6PI47 426 aaPredicted RBP8.68□□□□□ -1.02
SMC6-207ENST00000448223 B3GLCTQ6Y288 498 aa8.68□□□□□ -1.02
SMC6-207ENST00000448223 CEP68Q76N32 757 aa8.68□□□□□ -1.02
SMC6-207ENST00000448223 SERPINA9Q86WD7 417 aa8.68□□□□□ -1.02
SMC6-207ENST00000448223 DYRK2Q92630 601 aa8.68□□□□□ -1.02
SMC6-207ENST00000448223 GGHQ92820 318 aa8.68□□□□□ -1.02
SMC6-207ENST00000448223 EXTL1Q92935 676 aa8.68□□□□□ -1.02
SMC6-207ENST00000448223 FBXW5Q969U6 566 aa8.68□□□□□ -1.02
SMC6-207ENST00000448223 ISL2Q96A47 359 aa8.68□□□□□ -1.02
SMC6-207ENST00000448223 KIAA1143Q96AT1 154 aaPredicted RBP8.68□□□□□ -1.02
SMC6-207ENST00000448223 BTN2A3PQ96KV6 586 aa8.68□□□□□ -1.02
SMC6-207ENST00000448223 SLC30A3Q99726 388 aa8.68□□□□□ -1.02
SMC6-207ENST00000448223 PTPN18Q99952 460 aa8.68□□□□□ -1.02
SMC6-207ENST00000448223 TIMM29Q9BSF4 260 aa8.68□□□□□ -1.02
SMC6-207ENST00000448223 SLC6A20Q9NP91 592 aa8.68□□□□□ -1.02
SMC6-207ENST00000448223 PLSCR3Q9NRY6 295 aa8.68□□□□□ -1.02
SMC6-207ENST00000448223 MRPL22Q9NWU5 206 aaKnown RBP8.68□□□□□ -1.02
SMC6-207ENST00000448223 ERVW-1Q9UQF0 538 aa8.68□□□□□ -1.02
SMC6-207ENST00000448223 SLC22A14Q9Y267 594 aa8.68□□□□□ -1.02
SMC6-207ENST00000448223 FBXO7Q9Y3I1 522 aa8.68□□□□□ -1.02
SMC6-207ENST00000448223 COL11A1P12107 1806 aaPredicted RBP8.68□□□□□ -1.02
SMC6-207ENST00000448223 BLOC1S5-TXNDC5H3BN57 136 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms