RNA–Protein interactions for RNA: ENST00000446852.5

SMC6-206, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 1 (best)

Gene SMC6, Length 2,460 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-206ENST00000446852 EFHD2Q96C19 240 aaPredicted RBP16.08■□□□□ 0.17
SMC6-206ENST00000446852 RNFT2Q96EX2 444 aa16.08■□□□□ 0.17
SMC6-206ENST00000446852 CHCHD6Q9BRQ6 235 aa16.08■□□□□ 0.17
SMC6-206ENST00000446852 CENPOQ9BU64 300 aa16.08■□□□□ 0.17
SMC6-206ENST00000446852 ZNF426Q9BUY5 554 aa16.08■□□□□ 0.17
SMC6-206ENST00000446852 MND1Q9BWT6 205 aa16.08■□□□□ 0.17
SMC6-206ENST00000446852 ZNF768Q9H5H4 540 aaKnown RBP16.08■□□□□ 0.17
SMC6-206ENST00000446852 MRPS18AQ9NVS2 196 aaKnown RBP16.08■□□□□ 0.17
SMC6-206ENST00000446852 ATXN7L1Q9ULK2 861 aaPredicted RBP16.08■□□□□ 0.17
SMC6-206ENST00000446852 WDFY4Q6ZS81 3184 aa16.08■□□□□ 0.16
SMC6-206ENST00000446852 J3QRK9 145 aa16.08■□□□□ 0.16
SMC6-206ENST00000446852 CCRL2O00421 344 aa16.08■□□□□ 0.16
SMC6-206ENST00000446852 DSCR3O14972 297 aa16.08■□□□□ 0.16
SMC6-206ENST00000446852 SCG5P05408 212 aa16.08■□□□□ 0.16
SMC6-206ENST00000446852 NGFRP08138 427 aa16.08■□□□□ 0.16
SMC6-206ENST00000446852 MSL3P1P0C860 447 aa16.08■□□□□ 0.16
SMC6-206ENST00000446852 FBLP22087 321 aaKnown RBP16.08■□□□□ 0.16
SMC6-206ENST00000446852 SOX3P41225 446 aa16.08■□□□□ 0.16
SMC6-206ENST00000446852 CPEB4Q17RY0 729 aaKnown RBP eCLIP16.08■□□□□ 0.16
SMC6-206ENST00000446852 AADACL4Q5VUY2 407 aa16.08■□□□□ 0.16
SMC6-206ENST00000446852 ZNF574Q6ZN55 896 aaPredicted RBP16.08■□□□□ 0.16
SMC6-206ENST00000446852 TMPRSS11FQ6ZWK6 438 aa16.08■□□□□ 0.16
SMC6-206ENST00000446852 KMT5CQ86Y97 462 aa16.08■□□□□ 0.16
SMC6-206ENST00000446852 TMEM151BQ8IW70 566 aa16.08■□□□□ 0.16
SMC6-206ENST00000446852 LSMEM1Q8N8F7 131 aa16.08■□□□□ 0.16
SMC6-206ENST00000446852 OR13C2Q8NGS9 318 aa16.08■□□□□ 0.16
SMC6-206ENST00000446852 BORCS5Q969J3 196 aa16.08■□□□□ 0.16
SMC6-206ENST00000446852 TRIM2Q9C040 744 aa16.08■□□□□ 0.16
SMC6-206ENST00000446852 OR8D2Q9GZM6 311 aa16.08■□□□□ 0.16
SMC6-206ENST00000446852 ZNF304Q9HCX3 659 aa16.08■□□□□ 0.16
SMC6-206ENST00000446852 MED31Q9Y3C7 131 aa16.08■□□□□ 0.16
SMC6-206ENST00000446852 MPDZO75970 2070 aa16.08■□□□□ 0.16
SMC6-206ENST00000446852 LY6G6EA0A0G2JKS1 128 aa16.07■□□□□ 0.16
SMC6-206ENST00000446852 MTNR1AP48039 350 aa16.07■□□□□ 0.16
SMC6-206ENST00000446852 CTBP2P56545 445 aa16.07■□□□□ 0.16
SMC6-206ENST00000446852 GUSBP11Q6P575 273 aa16.07■□□□□ 0.16
SMC6-206ENST00000446852 KIRREL2Q6UWL6 708 aa16.07■□□□□ 0.16
SMC6-206ENST00000446852 CYP4Z2PQ8N1L4 340 aa16.07■□□□□ 0.16
SMC6-206ENST00000446852 PROKR2Q8NFJ6 384 aa16.07■□□□□ 0.16
SMC6-206ENST00000446852 BBS1Q8NFJ9 593 aa16.07■□□□□ 0.16
SMC6-206ENST00000446852 MAFAQ8NHW3 353 aaPredicted RBP16.07■□□□□ 0.16
SMC6-206ENST00000446852 VMP1Q96GC9 406 aa16.07■□□□□ 0.16
SMC6-206ENST00000446852 SH3YL1Q96HL8 342 aaPredicted RBP16.07■□□□□ 0.16
SMC6-206ENST00000446852 HS6ST2Q96MM7 605 aa16.07■□□□□ 0.16
SMC6-206ENST00000446852 SERTAD3Q9UJW9 196 aa16.07■□□□□ 0.16
SMC6-206ENST00000446852 PILRBQ9UKJ0 227 aa16.07■□□□□ 0.16
SMC6-206ENST00000446852 U3KQA8 63 aa16.07■□□□□ 0.16
SMC6-206ENST00000446852 DDAH2O95865 285 aa16.07■□□□□ 0.16
SMC6-206ENST00000446852 IGKV3-11P04433 115 aa16.07■□□□□ 0.16
SMC6-206ENST00000446852 UGT2B10P36537 528 aa16.07■□□□□ 0.16
SMC6-206ENST00000446852 PSMD4P55036 377 aaKnown RBP16.07■□□□□ 0.16
SMC6-206ENST00000446852 RPS3AP61247 264 aaKnown RBP16.07■□□□□ 0.16
SMC6-206ENST00000446852 RAB40BQ12829 278 aa16.07■□□□□ 0.16
SMC6-206ENST00000446852 KLHL22Q53GT1 634 aa16.07■□□□□ 0.16
SMC6-206ENST00000446852 ALG10BQ5I7T1 473 aa16.07■□□□□ 0.16
SMC6-206ENST00000446852 PERM1Q5SV97 790 aa16.07■□□□□ 0.16
SMC6-206ENST00000446852 THSD4Q6ZMP0 1018 aa16.07■□□□□ 0.16
SMC6-206ENST00000446852 SHFQ7M4L6 423 aa16.07■□□□□ 0.16
SMC6-206ENST00000446852 ADCK1Q86TW2 530 aa16.07■□□□□ 0.16
SMC6-206ENST00000446852 DTNBP1Q96EV8 351 aa16.07■□□□□ 0.16
SMC6-206ENST00000446852 PLEKHA8Q96JA3 519 aa16.07■□□□□ 0.16
SMC6-206ENST00000446852 NXF5Q9H1B4 397 aaKnown RBP16.07■□□□□ 0.16
SMC6-206ENST00000446852 FGF20Q9NP95 211 aaPredicted RBP16.07■□□□□ 0.16
SMC6-206ENST00000446852 MED17Q9NVC6 651 aa16.07■□□□□ 0.16
SMC6-206ENST00000446852 A0A1B0GTQ1 180 aa16.06■□□□□ 0.16
SMC6-206ENST00000446852 A0A1B0GX78 115 aa16.06■□□□□ 0.16
SMC6-206ENST00000446852 TCRBV16S1A1N1A0A5B0 115 aa16.06■□□□□ 0.16
SMC6-206ENST00000446852 SERINC4A6NH21 518 aa16.06■□□□□ 0.16
SMC6-206ENST00000446852 TTC36A6NLP5 189 aa16.06■□□□□ 0.16
SMC6-206ENST00000446852 BHLHE40O14503 412 aa16.06■□□□□ 0.16
SMC6-206ENST00000446852 CSTAP01040 98 aa16.06■□□□□ 0.16
SMC6-206ENST00000446852 IDUAP35475 653 aa16.06■□□□□ 0.16
SMC6-206ENST00000446852 CROCCP3Q8IVE0 287 aa16.06■□□□□ 0.16
SMC6-206ENST00000446852 PRSS58Q8IYP2 241 aa16.06■□□□□ 0.16
SMC6-206ENST00000446852 CADM2Q8N3J6 435 aa16.06■□□□□ 0.16
SMC6-206ENST00000446852 SLC2A12Q8TD20 617 aa16.06■□□□□ 0.16
SMC6-206ENST00000446852 SAP25Q8TEE9 199 aa16.06■□□□□ 0.16
SMC6-206ENST00000446852 SLC35B4Q969S0 331 aa16.06■□□□□ 0.16
SMC6-206ENST00000446852 HINT3Q9NQE9 182 aaKnown RBP16.06■□□□□ 0.16
SMC6-206ENST00000446852 SIGLEC7Q9Y286 467 aa16.06■□□□□ 0.16
SMC6-206ENST00000446852 TMEM5Q9Y2B1 443 aa16.06■□□□□ 0.16
SMC6-206ENST00000446852 CLCA3PQ9Y6N3 262 aa16.06■□□□□ 0.16
SMC6-206ENST00000446852 CPED1A4D0V7 1026 aa16.06■□□□□ 0.16
SMC6-206ENST00000446852 MYL12BO14950 172 aa16.06■□□□□ 0.16
SMC6-206ENST00000446852 SAGP10523 405 aaPredicted RBP16.06■□□□□ 0.16
SMC6-206ENST00000446852 CDH11P55287 796 aa16.06■□□□□ 0.16
SMC6-206ENST00000446852 C3orf38Q5JPI3 329 aa16.06■□□□□ 0.16
SMC6-206ENST00000446852 ARHGAP40Q5TG30 622 aa16.06■□□□□ 0.16
SMC6-206ENST00000446852 USP43Q70EL4 1123 aa16.06■□□□□ 0.16
SMC6-206ENST00000446852 ZNF550Q7Z398 422 aa16.06■□□□□ 0.16
SMC6-206ENST00000446852 BMP8AQ7Z5Y6 402 aa16.06■□□□□ 0.16
SMC6-206ENST00000446852 LAPTM4BQ86VI4 370 aa16.06■□□□□ 0.16
SMC6-206ENST00000446852 WDR5BQ86VZ2 330 aa16.06■□□□□ 0.16
SMC6-206ENST00000446852 CMIPQ8IY22 773 aa16.06■□□□□ 0.16
SMC6-206ENST00000446852 ZNF721Q8TF20 911 aa16.06■□□□□ 0.16
SMC6-206ENST00000446852 HSPBAP1Q96EW2 488 aa16.06■□□□□ 0.16
SMC6-206ENST00000446852 DPYSL5Q9BPU6 564 aa16.06■□□□□ 0.16
SMC6-206ENST00000446852 TEX12Q9BXU0 123 aa16.06■□□□□ 0.16
SMC6-206ENST00000446852 PRMT8Q9NR22 394 aaPredicted RBP16.06■□□□□ 0.16
SMC6-206ENST00000446852 ZDBF2Q9HCK1 2354 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms