RNA–Protein interactions for RNA: ENST00000441089.1

PTPN4-206, Transcript of protein tyrosine phosphatase, non-receptor type 4, human

TSL 3

Gene PTPN4, Length 671 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN4-206	ENST00000441089	CXorf36	Q9H7Y0	433 aa		4.37	□□□□□ -1.71
PTPN4-206	ENST00000441089	NANOG	Q9H9S0	305 aa		4.37	□□□□□ -1.71
PTPN4-206	ENST00000441089	EFCAB1	Q9HAE3	211 aa		4.37	□□□□□ -1.71
PTPN4-206	ENST00000441089	SLC35C2	Q9NQQ7	365 aa		4.37	□□□□□ -1.71
PTPN4-206	ENST00000441089	NECTIN3	Q9NQS3	549 aa		4.37	□□□□□ -1.71
PTPN4-206	ENST00000441089	LANCL2	Q9NS86	450 aa		4.37	□□□□□ -1.71
PTPN4-206	ENST00000441089	FAM120C	Q9NX05	1096 aa	Known RBP	4.37	□□□□□ -1.71
PTPN4-206	ENST00000441089	TAS2R7	Q9NYW3	318 aa		4.37	□□□□□ -1.71
PTPN4-206	ENST00000441089	EHD3	Q9NZN3	535 aa		4.37	□□□□□ -1.71
PTPN4-206	ENST00000441089	TMEM181	Q9P2C4	612 aa		4.37	□□□□□ -1.71
PTPN4-206	ENST00000441089	C11orf21	Q9P2W6	132 aa		4.37	□□□□□ -1.71
PTPN4-206	ENST00000441089	ABCD2	Q9UBJ2	740 aa		4.37	□□□□□ -1.71
PTPN4-206	ENST00000441089	CD300A	Q9UGN4	299 aa		4.37	□□□□□ -1.71
PTPN4-206	ENST00000441089	PHF11	Q9UIL8	331 aa		4.37	□□□□□ -1.71
PTPN4-206	ENST00000441089	BTNL2	Q9UIR0	455 aa		4.37	□□□□□ -1.71
PTPN4-206	ENST00000441089	CDC42EP3	Q9UKI2	254 aa		4.37	□□□□□ -1.71
PTPN4-206	ENST00000441089	UTS2R	Q9UKP6	389 aa		4.37	□□□□□ -1.71
PTPN4-206	ENST00000441089	CBLC	Q9ULV8	474 aa		4.37	□□□□□ -1.71
PTPN4-206	ENST00000441089	USP22	Q9UPT9	525 aa		4.37	□□□□□ -1.71
PTPN4-206	ENST00000441089	SEC23IP	Q9Y6Y8	1000 aa	Known RBP	4.37	□□□□□ -1.71
PTPN4-206	ENST00000441089	MALRD1	Q5VYJ5	2156 aa		4.36	□□□□□ -1.71
PTPN4-206	ENST00000441089	IGKV3D-11	A0A0A0MRZ8	115 aa		4.36	□□□□□ -1.71
PTPN4-206	ENST00000441089	NSG1	A0A0A6YYJ2	146 aa		4.36	□□□□□ -1.71
PTPN4-206	ENST00000441089	PRSS51	A0A1B0GVH4	220 aa		4.36	□□□□□ -1.71
PTPN4-206	ENST00000441089		A8MUI8	341 aa		4.36	□□□□□ -1.71
PTPN4-206	ENST00000441089	RFXANK	O14593	260 aa		4.36	□□□□□ -1.71
PTPN4-206	ENST00000441089	LDB3	O75112	727 aa		4.36	□□□□□ -1.71
PTPN4-206	ENST00000441089	GUCY1B2	O75343	617 aa		4.36	□□□□□ -1.71
PTPN4-206	ENST00000441089	NME6	O75414	186 aa	Predicted RBP	4.36	□□□□□ -1.71
PTPN4-206	ENST00000441089	ERN1	O75460	977 aa	Known RBP	4.36	□□□□□ -1.71
PTPN4-206	ENST00000441089	ERAL1	O75616	437 aa	Known RBP	4.36	□□□□□ -1.71
PTPN4-206	ENST00000441089	CDC123	O75794	336 aa	Predicted RBP	4.36	□□□□□ -1.71
PTPN4-206	ENST00000441089	WISP2	O76076	250 aa		4.36	□□□□□ -1.71
PTPN4-206	ENST00000441089	CNOT4	O95628	575 aa	Known RBP	4.36	□□□□□ -1.71
PTPN4-206	ENST00000441089	ONECUT2	O95948	504 aa		4.36	□□□□□ -1.71
PTPN4-206	ENST00000441089	F10	P00742	488 aa		4.36	□□□□□ -1.71
PTPN4-206	ENST00000441089	ABCB1	P08183	1280 aa	Predicted RBP	4.36	□□□□□ -1.71
PTPN4-206	ENST00000441089	CT62	P0C5K7	136 aa		4.36	□□□□□ -1.71
PTPN4-206	ENST00000441089	ZCCHC18	P0CG32	403 aa		4.36	□□□□□ -1.71
PTPN4-206	ENST00000441089	RNH1	P13489	461 aa	Known RBP	4.36	□□□□□ -1.71
PTPN4-206	ENST00000441089	ZNF24	P17028	368 aa		4.36	□□□□□ -1.71
PTPN4-206	ENST00000441089	MAOA	P21397	527 aa		4.36	□□□□□ -1.71
PTPN4-206	ENST00000441089	ZNF10	P21506	573 aa	Predicted RBP	4.36	□□□□□ -1.71
PTPN4-206	ENST00000441089	MSX2	P35548	267 aa	Predicted RBP	4.36	□□□□□ -1.71
PTPN4-206	ENST00000441089	PGM1	P36871	562 aa		4.36	□□□□□ -1.71
PTPN4-206	ENST00000441089	RPL3	P39023	403 aa	Known RBP	4.36	□□□□□ -1.71
PTPN4-206	ENST00000441089	FEN1	P39748	380 aa	Known RBP	4.36	□□□□□ -1.71
PTPN4-206	ENST00000441089	XCR1	P46094	333 aa		4.36	□□□□□ -1.71
PTPN4-206	ENST00000441089	AVPR1B	P47901	424 aa		4.36	□□□□□ -1.71
PTPN4-206	ENST00000441089	TRPC1	P48995	793 aa		4.36	□□□□□ -1.71
PTPN4-206	ENST00000441089	MNAT1	P51948	309 aa		4.36	□□□□□ -1.71
PTPN4-206	ENST00000441089	NCBP2	P52298	156 aa	Known RBP eCLIP	4.36	□□□□□ -1.71
PTPN4-206	ENST00000441089	ARSF	P54793	590 aa		4.36	□□□□□ -1.71
PTPN4-206	ENST00000441089	CASP9	P55211	416 aa		4.36	□□□□□ -1.71
PTPN4-206	ENST00000441089	IGLV3-21	P80748	117 aa	Predicted RBP	4.36	□□□□□ -1.71
PTPN4-206	ENST00000441089	RHAG	Q02094	409 aa		4.36	□□□□□ -1.71
PTPN4-206	ENST00000441089	MGAT2	Q10469	447 aa		4.36	□□□□□ -1.71
PTPN4-206	ENST00000441089	HSPB3	Q12988	150 aa		4.36	□□□□□ -1.71
PTPN4-206	ENST00000441089	DUSP8	Q13202	625 aa		4.36	□□□□□ -1.71
PTPN4-206	ENST00000441089	FHL2	Q14192	279 aa		4.36	□□□□□ -1.71
PTPN4-206	ENST00000441089	FAM214A	Q32MH5	1076 aa		4.36	□□□□□ -1.71
PTPN4-206	ENST00000441089	DNAL1	Q4LDG9	190 aa		4.36	□□□□□ -1.71
PTPN4-206	ENST00000441089	PIGG	Q5H8A4	983 aa		4.36	□□□□□ -1.71
PTPN4-206	ENST00000441089	C6orf10	Q5SRN2	563 aa		4.36	□□□□□ -1.71
PTPN4-206	ENST00000441089	ANXA8L1	Q5VT79	327 aa		4.36	□□□□□ -1.71
PTPN4-206	ENST00000441089	YOD1	Q5VVQ6	348 aa	Predicted RBP	4.36	□□□□□ -1.71
PTPN4-206	ENST00000441089	VASN	Q6EMK4	673 aa		4.36	□□□□□ -1.71
PTPN4-206	ENST00000441089	FAM111B	Q6SJ93	734 aa		4.36	□□□□□ -1.71
PTPN4-206	ENST00000441089	C16orf89	Q6UX73	402 aa		4.36	□□□□□ -1.71
PTPN4-206	ENST00000441089	USP51	Q70EK9	711 aa		4.36	□□□□□ -1.71
PTPN4-206	ENST00000441089	OVCH1	Q7RTY7	1134 aa		4.36	□□□□□ -1.71
PTPN4-206	ENST00000441089	CALHM3	Q86XJ0	350 aa		4.36	□□□□□ -1.71
PTPN4-206	ENST00000441089	SIAH3	Q8IW03	269 aa		4.36	□□□□□ -1.71
PTPN4-206	ENST00000441089	CHERP	Q8IWX8	916 aa	Known RBP	4.36	□□□□□ -1.71
PTPN4-206	ENST00000441089	KLHL36	Q8N4N3	616 aa		4.36	□□□□□ -1.71
PTPN4-206	ENST00000441089	MARVELD2	Q8N4S9	558 aa		4.36	□□□□□ -1.71
PTPN4-206	ENST00000441089	SIRT6	Q8N6T7	355 aa		4.36	□□□□□ -1.71
PTPN4-206	ENST00000441089	RNF148	Q8N7C7	305 aa		4.36	□□□□□ -1.71
PTPN4-206	ENST00000441089	AMER2	Q8N7J2	671 aa		4.36	□□□□□ -1.71
PTPN4-206	ENST00000441089	DTX3	Q8N9I9	347 aa		4.36	□□□□□ -1.71
PTPN4-206	ENST00000441089	PCYOX1L	Q8NBM8	494 aa		4.36	□□□□□ -1.71
PTPN4-206	ENST00000441089	FAM156A	Q8NDB6	213 aa		4.36	□□□□□ -1.71
PTPN4-206	ENST00000441089	OR4K14	Q8NGD5	310 aa		4.36	□□□□□ -1.71
PTPN4-206	ENST00000441089	OR4A15	Q8NGL6	344 aa		4.36	□□□□□ -1.71
PTPN4-206	ENST00000441089	OR9A2	Q8NGT5	310 aa		4.36	□□□□□ -1.71
PTPN4-206	ENST00000441089	OR5AK3P	Q8NH89	298 aa		4.36	□□□□□ -1.71
PTPN4-206	ENST00000441089	PSMA8	Q8TAA3	256 aa		4.36	□□□□□ -1.71
PTPN4-206	ENST00000441089	BRIX1	Q8TDN6	353 aa	Known RBP	4.36	□□□□□ -1.71
PTPN4-206	ENST00000441089	ZFP90	Q8TF47	636 aa		4.36	□□□□□ -1.71
PTPN4-206	ENST00000441089	WDR60	Q8WVS4	1066 aa		4.36	□□□□□ -1.71
PTPN4-206	ENST00000441089	OR5P2	Q8WZ92	322 aa		4.36	□□□□□ -1.71
PTPN4-206	ENST00000441089	PSMF1	Q92530	271 aa		4.36	□□□□□ -1.71
PTPN4-206	ENST00000441089	TSLP	Q969D9	159 aa		4.36	□□□□□ -1.71
PTPN4-206	ENST00000441089	TBC1D20	Q96BZ9	403 aa		4.36	□□□□□ -1.71
PTPN4-206	ENST00000441089	MVB12A	Q96EY5	273 aa		4.36	□□□□□ -1.71
PTPN4-206	ENST00000441089	ITCH	Q96J02	903 aa		4.36	□□□□□ -1.71
PTPN4-206	ENST00000441089	AMDHD1	Q96NU7	426 aa		4.36	□□□□□ -1.71
PTPN4-206	ENST00000441089	ANKRD27	Q96NW4	1050 aa		4.36	□□□□□ -1.71
PTPN4-206	ENST00000441089	SIGLEC12	Q96PQ1	595 aa		4.36	□□□□□ -1.71
PTPN4-206	ENST00000441089	PANX1	Q96RD7	426 aa		4.36	□□□□□ -1.71

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