RNA–Protein interactions for RNA: ENST00000438629.2

LSM1P1-201, Transcript of LSM1 homolog, mRNA degradation associated pseudogene 1, humanhuman

BASIC

Gene LSM1P1, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1P1-201ENST00000438629 RPL23AP62750 156 aaKnown RBP2.88□□□□□ -1.95
LSM1P1-201ENST00000438629 ZNF85Q03923 595 aa2.88□□□□□ -1.95
LSM1P1-201ENST00000438629 SRYQ05066 204 aa2.88□□□□□ -1.95
LSM1P1-201ENST00000438629 CUL1Q13616 776 aa2.88□□□□□ -1.95
LSM1P1-201ENST00000438629 STK38Q15208 465 aa2.88□□□□□ -1.95
LSM1P1-201ENST00000438629 ZIC1Q15915 447 aa2.88□□□□□ -1.95
LSM1P1-201ENST00000438629 BEND6Q5SZJ8 279 aaPredicted RBP2.88□□□□□ -1.95
LSM1P1-201ENST00000438629 PRAMEF20Q5VT98 475 aa2.88□□□□□ -1.95
LSM1P1-201ENST00000438629 LIPKQ5VXJ0 399 aa2.88□□□□□ -1.95
LSM1P1-201ENST00000438629 PDPK2PQ6A1A2 396 aa2.88□□□□□ -1.95
LSM1P1-201ENST00000438629 C6orf89Q6UWU4 347 aa2.88□□□□□ -1.95
LSM1P1-201ENST00000438629 C2orf66Q6UXQ4 117 aa2.88□□□□□ -1.95
LSM1P1-201ENST00000438629 PAQR9Q6ZVX9 377 aa2.88□□□□□ -1.95
LSM1P1-201ENST00000438629 PSTKQ8IV42 348 aaKnown RBP2.88□□□□□ -1.95
LSM1P1-201ENST00000438629 ZNF321PQ8N8H1 164 aa2.88□□□□□ -1.95
LSM1P1-201ENST00000438629 AKR7LQ8NHP1 331 aa2.88□□□□□ -1.95
LSM1P1-201ENST00000438629 ZNF671Q8TAW3 534 aa2.88□□□□□ -1.95
LSM1P1-201ENST00000438629 TRMT10AQ8TBZ6 339 aaKnown RBP2.88□□□□□ -1.95
LSM1P1-201ENST00000438629 SLC22A8Q8TCC7 542 aa2.88□□□□□ -1.95
LSM1P1-201ENST00000438629 DDI1Q8WTU0 396 aa2.88□□□□□ -1.95
LSM1P1-201ENST00000438629 PEX13Q92968 403 aa2.88□□□□□ -1.95
LSM1P1-201ENST00000438629 RASD2Q96D21 266 aa2.88□□□□□ -1.95
LSM1P1-201ENST00000438629 C11orf24Q96F05 449 aaPredicted RBP2.88□□□□□ -1.95
LSM1P1-201ENST00000438629 PPP1R16AQ96I34 528 aa2.88□□□□□ -1.95
LSM1P1-201ENST00000438629 PIWIL1Q96J94 861 aaKnown RBP2.88□□□□□ -1.95
LSM1P1-201ENST00000438629 OR5M11Q96RB7 305 aa2.88□□□□□ -1.95
LSM1P1-201ENST00000438629 SECISBP2Q96T21 854 aaKnown RBP2.88□□□□□ -1.95
LSM1P1-201ENST00000438629 LLPHQ9BRT6 129 aaKnown RBP2.88□□□□□ -1.95
LSM1P1-201ENST00000438629 ALG12Q9BV10 488 aa2.88□□□□□ -1.95
LSM1P1-201ENST00000438629 SPZ1Q9BXG8 430 aa2.88□□□□□ -1.95
LSM1P1-201ENST00000438629 RRAGDQ9NQL2 400 aaPredicted RBP2.88□□□□□ -1.95
LSM1P1-201ENST00000438629 ETNK2Q9NVF9 386 aa2.88□□□□□ -1.95
LSM1P1-201ENST00000438629 FAM120CQ9NX05 1096 aaKnown RBP2.88□□□□□ -1.95
LSM1P1-201ENST00000438629 ABCD2Q9UBJ2 740 aa2.88□□□□□ -1.95
LSM1P1-201ENST00000438629 TP53TG3Q9ULZ0 132 aa2.88□□□□□ -1.95
LSM1P1-201ENST00000438629 NTNG1Q9Y2I2 539 aa2.88□□□□□ -1.95
LSM1P1-201ENST00000438629 ATP6V1DQ9Y5K8 247 aa2.88□□□□□ -1.95
LSM1P1-201ENST00000438629 NOTCH3Q9UM47 2321 aa2.88□□□□□ -1.95
LSM1P1-201ENST00000438629 CARMIL1Q5VZK9 1371 aa2.87□□□□□ -1.95
LSM1P1-201ENST00000438629 A0A1B0GUL7 405 aa2.87□□□□□ -1.95
LSM1P1-201ENST00000438629 GOLGA8OA6NCC3 632 aa2.87□□□□□ -1.95
LSM1P1-201ENST00000438629 HSBP1L1C9JCN9 74 aa2.87□□□□□ -1.95
LSM1P1-201ENST00000438629 GOLGA8NF8WBI6 632 aa2.87□□□□□ -1.95
LSM1P1-201ENST00000438629 NDUFAB1O14561 156 aa2.87□□□□□ -1.95
LSM1P1-201ENST00000438629 HDAC3O15379 428 aa2.87□□□□□ -1.95
LSM1P1-201ENST00000438629 GPAA1O43292 621 aa2.87□□□□□ -1.95
LSM1P1-201ENST00000438629 TOXO94900 526 aa2.87□□□□□ -1.95
LSM1P1-201ENST00000438629 NDUFA7O95182 113 aa2.87□□□□□ -1.95
LSM1P1-201ENST00000438629 OR5F1O95221 314 aa2.87□□□□□ -1.95
LSM1P1-201ENST00000438629 IGKV3-15P01624 115 aa2.87□□□□□ -1.95
LSM1P1-201ENST00000438629 CHRNA1P02708 482 aa2.87□□□□□ -1.95
LSM1P1-201ENST00000438629 CSF2P04141 144 aa2.87□□□□□ -1.95
LSM1P1-201ENST00000438629 UBTFL6P0CB48 400 aaPredicted RBP2.87□□□□□ -1.95
LSM1P1-201ENST00000438629 ANXA8P13928 327 aa2.87□□□□□ -1.95
LSM1P1-201ENST00000438629 DRD5P21918 477 aa2.87□□□□□ -1.95
LSM1P1-201ENST00000438629 PAICSP22234 425 aaKnown RBP2.87□□□□□ -1.95
LSM1P1-201ENST00000438629 IGFBP5P24593 272 aa2.87□□□□□ -1.95
LSM1P1-201ENST00000438629 CHMLP26374 656 aa2.87□□□□□ -1.95
LSM1P1-201ENST00000438629 PTBP1P26599 531 aaKnown RBP eCLIP2.87□□□□□ -1.95
LSM1P1-201ENST00000438629 PTPN6P29350 595 aa2.87□□□□□ -1.95
LSM1P1-201ENST00000438629 EVI2BP34910 448 aa2.87□□□□□ -1.95
LSM1P1-201ENST00000438629 BMI1P35226 326 aa2.87□□□□□ -1.95
LSM1P1-201ENST00000438629 HMGCLP35914 325 aa2.87□□□□□ -1.95
LSM1P1-201ENST00000438629 MAGEA9P43362 315 aa2.87□□□□□ -1.95
LSM1P1-201ENST00000438629 NOVP48745 357 aa2.87□□□□□ -1.95
LSM1P1-201ENST00000438629 EMDP50402 254 aa2.87□□□□□ -1.95
LSM1P1-201ENST00000438629 MAP3K7CLP57077 242 aa2.87□□□□□ -1.95
LSM1P1-201ENST00000438629 ARHGAP19Q14CB8 494 aa2.87□□□□□ -1.95
LSM1P1-201ENST00000438629 ZNF699Q32M78 642 aa2.87□□□□□ -1.95
LSM1P1-201ENST00000438629 Q3ZCU0 254 aa2.87□□□□□ -1.95
LSM1P1-201ENST00000438629 UTF1Q5T230 341 aa2.87□□□□□ -1.95
LSM1P1-201ENST00000438629 ANXA8L1Q5VT79 327 aa2.87□□□□□ -1.95
LSM1P1-201ENST00000438629 LEG1Q6P5S2 330 aa2.87□□□□□ -1.95
LSM1P1-201ENST00000438629 BLOC1S2Q6QNY1 142 aa2.87□□□□□ -1.95
LSM1P1-201ENST00000438629 GCNT7Q6ZNI0 430 aa2.87□□□□□ -1.95
LSM1P1-201ENST00000438629 NET1Q7Z628 596 aaPredicted RBP2.87□□□□□ -1.95
LSM1P1-201ENST00000438629 ADGRD2Q7Z7M1 963 aa2.87□□□□□ -1.95
LSM1P1-201ENST00000438629 GRAMD2AQ8IUY3 354 aa2.87□□□□□ -1.95
LSM1P1-201ENST00000438629 GCNT2Q8N0V5 402 aa2.87□□□□□ -1.95
LSM1P1-201ENST00000438629 UBE2J2Q8N2K1 259 aa2.87□□□□□ -1.95
LSM1P1-201ENST00000438629 ZNF565Q8N9K5 539 aa2.87□□□□□ -1.95
LSM1P1-201ENST00000438629 CDC26Q8NHZ8 85 aa2.87□□□□□ -1.95
LSM1P1-201ENST00000438629 FNDC8Q8TC99 324 aa2.87□□□□□ -1.95
LSM1P1-201ENST00000438629 EFHD2Q96C19 240 aaPredicted RBP2.87□□□□□ -1.95
LSM1P1-201ENST00000438629 PPP1R14BQ96C90 147 aa2.87□□□□□ -1.95
LSM1P1-201ENST00000438629 LRRC39Q96DD0 335 aa2.87□□□□□ -1.95
LSM1P1-201ENST00000438629 MSANTD3Q96H12 275 aa2.87□□□□□ -1.95
LSM1P1-201ENST00000438629 SERAC1Q96JX3 654 aa2.87□□□□□ -1.95
LSM1P1-201ENST00000438629 C7orf34Q96L11 122 aa2.87□□□□□ -1.95
LSM1P1-201ENST00000438629 TRIM62Q9BVG3 475 aa2.87□□□□□ -1.95
LSM1P1-201ENST00000438629 HAUS4Q9H6D7 363 aa2.87□□□□□ -1.95
LSM1P1-201ENST00000438629 EXO5Q9H790 373 aa2.87□□□□□ -1.95
LSM1P1-201ENST00000438629 SYNDIG1Q9H7V2 258 aa2.87□□□□□ -1.95
LSM1P1-201ENST00000438629 ACTR8Q9H981 624 aa2.87□□□□□ -1.95
LSM1P1-201ENST00000438629 POLD4Q9HCU8 107 aa2.87□□□□□ -1.95
LSM1P1-201ENST00000438629 YAE1D1Q9NRH1 226 aa2.87□□□□□ -1.95
LSM1P1-201ENST00000438629 DCAF13Q9NV06 445 aaKnown RBP2.87□□□□□ -1.95
LSM1P1-201ENST00000438629 HYPKQ9NX55 129 aa2.87□□□□□ -1.95
LSM1P1-201ENST00000438629 DPM3Q9P2X0 92 aa2.87□□□□□ -1.95
LSM1P1-201ENST00000438629 MBD2Q9UBB5 411 aa2.87□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms