RNA–Protein interactions for RNA: ENST00000437340.5

CPNE1-216, Transcript of copine 1, humanhuman

TSL 1 (best)

Gene CPNE1, Length 1,755 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-216ENST00000437340 SAMD8Q96LT4 415 aa23.7■■□□□ 1.38
CPNE1-216ENST00000437340 OPALINQ96PE5 141 aa23.7■■□□□ 1.38
CPNE1-216ENST00000437340 OR52D1Q9H346 318 aa23.7■■□□□ 1.38
CPNE1-216ENST00000437340 UBQLN3Q9H347 655 aa23.7■■□□□ 1.38
CPNE1-216ENST00000437340 HHATLQ9HCP6 504 aa23.7■■□□□ 1.38
CPNE1-216ENST00000437340 PNO1Q9NRX1 252 aaKnown RBP23.7■■□□□ 1.38
CPNE1-216ENST00000437340 CLEC2DQ9UHP7 191 aa23.7■■□□□ 1.38
CPNE1-216ENST00000437340 GPR52Q9Y2T5 361 aa23.7■■□□□ 1.38
CPNE1-216ENST00000437340 A0A1B0GX78 115 aa23.69■■□□□ 1.38
CPNE1-216ENST00000437340 EFCAB7A8K855 629 aa23.69■■□□□ 1.38
CPNE1-216ENST00000437340 POLR1CO15160 346 aaPredicted RBP23.69■■□□□ 1.38
CPNE1-216ENST00000437340 CSO75390 466 aaKnown RBP23.69■■□□□ 1.38
CPNE1-216ENST00000437340 FBLP22087 321 aaKnown RBP23.69■■□□□ 1.38
CPNE1-216ENST00000437340 MTNR1AP48039 350 aa23.69■■□□□ 1.38
CPNE1-216ENST00000437340 SLC37A1P57057 533 aa23.69■■□□□ 1.38
CPNE1-216ENST00000437340 TSTQ16762 297 aaKnown RBP23.69■■□□□ 1.38
CPNE1-216ENST00000437340 AADACL4Q5VUY2 407 aa23.69■■□□□ 1.38
CPNE1-216ENST00000437340 PEAR1Q5VY43 1037 aaPredicted RBP23.69■■□□□ 1.38
CPNE1-216ENST00000437340 ZBTB44Q8NCP5 570 aa23.69■■□□□ 1.38
CPNE1-216ENST00000437340 KBTBD8Q8NFY9 601 aa23.69■■□□□ 1.38
CPNE1-216ENST00000437340 OR52L1Q8NGH7 329 aa23.69■■□□□ 1.38
CPNE1-216ENST00000437340 BPIFA2Q96DR5 249 aa23.69■■□□□ 1.38
CPNE1-216ENST00000437340 HOXD1Q9GZZ0 328 aa23.69■■□□□ 1.38
CPNE1-216ENST00000437340 FSCN3Q9NQT6 498 aa23.69■■□□□ 1.38
CPNE1-216ENST00000437340 C20orf141Q9NUB4 165 aa23.69■■□□□ 1.38
CPNE1-216ENST00000437340 A0A1B0GTQ1 180 aa23.68■■□□□ 1.38
CPNE1-216ENST00000437340 SERINC4A6NH21 518 aa23.68■■□□□ 1.38
CPNE1-216ENST00000437340 A8MU76 341 aa23.68■■□□□ 1.38
CPNE1-216ENST00000437340 MYL12BO14950 172 aa23.68■■□□□ 1.38
CPNE1-216ENST00000437340 MYF5P13349 255 aa23.68■■□□□ 1.38
CPNE1-216ENST00000437340 BMP7P18075 431 aa23.68■■□□□ 1.38
CPNE1-216ENST00000437340 RORAP35398 523 aa23.68■■□□□ 1.38
CPNE1-216ENST00000437340 PPICP45877 212 aa23.68■■□□□ 1.38
CPNE1-216ENST00000437340 ELAVL1Q15717 326 aaKnown RBP23.68■■□□□ 1.38
CPNE1-216ENST00000437340 TMEM71Q6P5X7 295 aa23.68■■□□□ 1.38
CPNE1-216ENST00000437340 ATCAYQ86WG3 371 aa23.68■■□□□ 1.38
CPNE1-216ENST00000437340 ZSCAN1Q8NBB4 408 aa23.68■■□□□ 1.38
CPNE1-216ENST00000437340 FANK1Q8TC84 345 aa23.68■■□□□ 1.38
CPNE1-216ENST00000437340 RNFT2Q96EX2 444 aa23.68■■□□□ 1.38
CPNE1-216ENST00000437340 SH3YL1Q96HL8 342 aaPredicted RBP23.68■■□□□ 1.38
CPNE1-216ENST00000437340 NUDT22Q9BRQ3 303 aa23.68■■□□□ 1.38
CPNE1-216ENST00000437340 SLIRPQ9GZT3 109 aaKnown RBP23.68■■□□□ 1.38
CPNE1-216ENST00000437340 FGF21Q9NSA1 209 aa23.68■■□□□ 1.38
CPNE1-216ENST00000437340 SLC35A3Q9Y2D2 325 aa23.68■■□□□ 1.38
CPNE1-216ENST00000437340 WDFY4Q6ZS81 3184 aa23.68■■□□□ 1.38
CPNE1-216ENST00000437340 DMDP11532 3685 aa23.68■■□□□ 1.38
CPNE1-216ENST00000437340 ARHGAP33O14559 1287 aa23.68■■□□□ 1.38
CPNE1-216ENST00000437340 ENDOUP21128 410 aaKnown RBP23.68■■□□□ 1.38
CPNE1-216ENST00000437340 GRK5P34947 590 aa23.68■■□□□ 1.38
CPNE1-216ENST00000437340 NNATQ16517 81 aa23.68■■□□□ 1.38
CPNE1-216ENST00000437340 ULK3Q6PHR2 472 aa23.68■■□□□ 1.38
CPNE1-216ENST00000437340 ZNF440Q8IYI8 595 aa23.68■■□□□ 1.38
CPNE1-216ENST00000437340 GRHL3Q8TE85 626 aa23.68■■□□□ 1.38
CPNE1-216ENST00000437340 DACH2Q96NX9 599 aa23.68■■□□□ 1.38
CPNE1-216ENST00000437340 OR51E2Q9H255 320 aa23.68■■□□□ 1.38
CPNE1-216ENST00000437340 OCEL1Q9H607 264 aa23.68■■□□□ 1.38
CPNE1-216ENST00000437340 ZBTB20Q9HC78 741 aaPredicted RBP23.68■■□□□ 1.38
CPNE1-216ENST00000437340 ATP13A2Q9NQ11 1180 aa23.68■■□□□ 1.38
CPNE1-216ENST00000437340 CLCA3PQ9Y6N3 262 aa23.68■■□□□ 1.38
CPNE1-216ENST00000437340 CABIN1Q9Y6J0 2220 aa23.67■■□□□ 1.38
CPNE1-216ENST00000437340 VPS13AQ96RL7 3174 aa23.67■■□□□ 1.38
CPNE1-216ENST00000437340 A0A1B0GVG6 124 aa23.67■■□□□ 1.38
CPNE1-216ENST00000437340 TCRBV16S1A1N1A0A5B0 115 aa23.67■■□□□ 1.38
CPNE1-216ENST00000437340 ADAM11O75078 769 aa23.67■■□□□ 1.38
CPNE1-216ENST00000437340 IGKV3-11P04433 115 aa23.67■■□□□ 1.38
CPNE1-216ENST00000437340 ZGLP1P0C6A0 271 aa23.67■■□□□ 1.38
CPNE1-216ENST00000437340 CKMT1AP12532 417 aa23.67■■□□□ 1.38
CPNE1-216ENST00000437340 MYL12AP19105 171 aa23.67■■□□□ 1.38
CPNE1-216ENST00000437340 MLLT11Q13015 90 aaPredicted RBP23.67■■□□□ 1.38
CPNE1-216ENST00000437340 NR0B2Q15466 257 aa23.67■■□□□ 1.38
CPNE1-216ENST00000437340 NXNL2Q5VZ03 156 aa23.67■■□□□ 1.38
CPNE1-216ENST00000437340 LINC00114Q6XXX2 140 aa23.67■■□□□ 1.38
CPNE1-216ENST00000437340 ZBTB46Q86UZ6 589 aa23.67■■□□□ 1.38
CPNE1-216ENST00000437340 SLITRK4Q8IW52 837 aa23.67■■□□□ 1.38
CPNE1-216ENST00000437340 OR4C6Q8NH72 309 aa23.67■■□□□ 1.38
CPNE1-216ENST00000437340 S100ZQ8WXG8 99 aa23.67■■□□□ 1.38
CPNE1-216ENST00000437340 TSLPQ969D9 159 aa23.67■■□□□ 1.38
CPNE1-216ENST00000437340 FN3KQ9H479 309 aa23.67■■□□□ 1.38
CPNE1-216ENST00000437340 MEPEQ9NQ76 525 aaPredicted RBP23.67■■□□□ 1.38
CPNE1-216ENST00000437340 FBXO8Q9NRD0 319 aa23.67■■□□□ 1.38
CPNE1-216ENST00000437340 CHCHD3Q9NX63 227 aaKnown RBP23.67■■□□□ 1.38
CPNE1-216ENST00000437340 EXOSC1Q9Y3B2 195 aaKnown RBP23.67■■□□□ 1.38
CPNE1-216ENST00000437340 PMF1-BGLAPU3KQ54 211 aa23.67■■□□□ 1.38
CPNE1-216ENST00000437340 ARID1BQ8NFD5 2236 aaPredicted RBP23.67■■□□□ 1.38
CPNE1-216ENST00000437340 SYNDIG1LA6NDD5 238 aa23.66■■□□□ 1.38
CPNE1-216ENST00000437340 FAM86C2PA6NEL3 165 aa23.66■■□□□ 1.38
CPNE1-216ENST00000437340 CH25HO95992 272 aa23.66■■□□□ 1.38
CPNE1-216ENST00000437340 CSTAP01040 98 aa23.66■■□□□ 1.38
CPNE1-216ENST00000437340 TBXA2RP21731 343 aa23.66■■□□□ 1.38
CPNE1-216ENST00000437340 ADH7P40394 386 aa23.66■■□□□ 1.38
CPNE1-216ENST00000437340 CDH11P55287 796 aa23.66■■□□□ 1.38
CPNE1-216ENST00000437340 FXYD6P3P58550 94 aa23.66■■□□□ 1.38
CPNE1-216ENST00000437340 SSX1Q16384 188 aa23.66■■□□□ 1.38
CPNE1-216ENST00000437340 KLHL26Q53HC5 615 aa23.66■■□□□ 1.38
CPNE1-216ENST00000437340 ALG10BQ5I7T1 473 aa23.66■■□□□ 1.38
CPNE1-216ENST00000437340 HSDL2Q6YN16 418 aa23.66■■□□□ 1.38
CPNE1-216ENST00000437340 ARHGAP22Q7Z5H3 698 aa23.66■■□□□ 1.38
CPNE1-216ENST00000437340 SLC43A2Q8N370 569 aa23.66■■□□□ 1.38
CPNE1-216ENST00000437340 SLC15A4Q8N697 577 aa23.66■■□□□ 1.38
CPNE1-216ENST00000437340 OR4C3Q8NH37 302 aa23.66■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 97.3 ms