RNA–Protein interactions for RNA: ENST00000435891.5

CLSTN1-203, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 3,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-203ENST00000435891 DUSP6Q16828 381 aa9.68□□□□□ -0.86
CLSTN1-203ENST00000435891 TMEM196Q5HYL7 178 aa9.68□□□□□ -0.86
CLSTN1-203ENST00000435891 EOGTQ5NDL2 527 aa9.68□□□□□ -0.86
CLSTN1-203ENST00000435891 XKRXQ6PP77 449 aa9.68□□□□□ -0.86
CLSTN1-203ENST00000435891 SMARCD3Q6STE5 483 aa9.68□□□□□ -0.86
CLSTN1-203ENST00000435891 NR2C2APQ86WQ0 139 aa9.68□□□□□ -0.86
CLSTN1-203ENST00000435891 KLBQ86Z14 1044 aa9.68□□□□□ -0.86
CLSTN1-203ENST00000435891 OR4N4Q8N0Y3 316 aa9.68□□□□□ -0.86
CLSTN1-203ENST00000435891 LSM14AQ8ND56 463 aaKnown RBP9.68□□□□□ -0.86
CLSTN1-203ENST00000435891 OR51G2Q8NGK0 314 aa9.68□□□□□ -0.86
CLSTN1-203ENST00000435891 PFN4Q8NHR9 129 aa9.68□□□□□ -0.86
CLSTN1-203ENST00000435891 FLVCR1-AS1Q8TAF5 88 aa9.68□□□□□ -0.86
CLSTN1-203ENST00000435891 SMAP2Q8WU79 429 aaPredicted RBP9.68□□□□□ -0.86
CLSTN1-203ENST00000435891 TBX5Q99593 518 aa9.68□□□□□ -0.86
CLSTN1-203ENST00000435891 PRSS27Q9BQR3 290 aa9.68□□□□□ -0.86
CLSTN1-203ENST00000435891 DPH1Q9BZG8 443 aa9.68□□□□□ -0.86
CLSTN1-203ENST00000435891 SFXN1Q9H9B4 322 aa9.68□□□□□ -0.86
CLSTN1-203ENST00000435891 B3GAT2Q9NPZ5 323 aa9.68□□□□□ -0.86
CLSTN1-203ENST00000435891 NPAP1Q9NZP6 1156 aa9.68□□□□□ -0.86
CLSTN1-203ENST00000435891 PEX12O00623 359 aa9.68□□□□□ -0.86
CLSTN1-203ENST00000435891 LDB3O75112 727 aa9.68□□□□□ -0.86
CLSTN1-203ENST00000435891 CPN2P22792 545 aa9.68□□□□□ -0.86
CLSTN1-203ENST00000435891 HTR2AP28223 471 aa9.68□□□□□ -0.86
CLSTN1-203ENST00000435891 TEAD1P28347 426 aa9.68□□□□□ -0.86
CLSTN1-203ENST00000435891 IFNGR2P38484 337 aa9.68□□□□□ -0.86
CLSTN1-203ENST00000435891 GCGRP47871 477 aa9.68□□□□□ -0.86
CLSTN1-203ENST00000435891 B2MP61769 119 aa9.68□□□□□ -0.86
CLSTN1-203ENST00000435891 CSTF1Q05048 431 aaKnown RBP9.68□□□□□ -0.86
CLSTN1-203ENST00000435891 GRM7Q14831 915 aa9.68□□□□□ -0.86
CLSTN1-203ENST00000435891 DECR1Q16698 335 aa9.68□□□□□ -0.86
CLSTN1-203ENST00000435891 ZNF776Q68DI1 518 aaPredicted RBP9.68□□□□□ -0.86
CLSTN1-203ENST00000435891 MBOAT2Q6ZWT7 520 aa9.68□□□□□ -0.86
CLSTN1-203ENST00000435891 LRRC25Q8N386 305 aaPredicted RBP9.68□□□□□ -0.86
CLSTN1-203ENST00000435891 TMEM52Q8NDY8 209 aa9.68□□□□□ -0.86
CLSTN1-203ENST00000435891 PHOSPHO2Q8TCD6 241 aa9.68□□□□□ -0.86
CLSTN1-203ENST00000435891 TIMP4Q99727 224 aa9.68□□□□□ -0.86
CLSTN1-203ENST00000435891 KCNN2Q9H2S1 579 aa9.68□□□□□ -0.86
CLSTN1-203ENST00000435891 KIR3DX1Q9H7L2 352 aa9.68□□□□□ -0.86
CLSTN1-203ENST00000435891 SLC23A1Q9UHI7 598 aa9.68□□□□□ -0.86
CLSTN1-203ENST00000435891 B4DXG7 233 aa9.67□□□□□ -0.86
CLSTN1-203ENST00000435891 GABRPO00591 440 aa9.67□□□□□ -0.86
CLSTN1-203ENST00000435891 LINC01565O15544 149 aa9.67□□□□□ -0.86
CLSTN1-203ENST00000435891 TBXA2RP21731 343 aa9.67□□□□□ -0.86
CLSTN1-203ENST00000435891 FGF9P31371 208 aaPredicted RBP9.67□□□□□ -0.86
CLSTN1-203ENST00000435891 CDC73Q6P1J9 531 aa9.67□□□□□ -0.86
CLSTN1-203ENST00000435891 PLBD1Q6P4A8 553 aa9.67□□□□□ -0.86
CLSTN1-203ENST00000435891 CNIH2Q6PI25 160 aa9.67□□□□□ -0.86
CLSTN1-203ENST00000435891 ENPP7Q6UWV6 458 aa9.67□□□□□ -0.86
CLSTN1-203ENST00000435891 TMEM91Q6ZNR0 172 aa9.67□□□□□ -0.86
CLSTN1-203ENST00000435891 ASPGQ86U10 573 aa9.67□□□□□ -0.86
CLSTN1-203ENST00000435891 MARCH9Q86YJ5 346 aa9.67□□□□□ -0.86
CLSTN1-203ENST00000435891 YAF2Q8IY57 180 aa9.67□□□□□ -0.86
CLSTN1-203ENST00000435891 SRFBP1Q8NEF9 429 aaKnown RBP9.67□□□□□ -0.86
CLSTN1-203ENST00000435891 ZFAND1Q8TCF1 268 aa9.67□□□□□ -0.86
CLSTN1-203ENST00000435891 GAL3ST3Q96A11 431 aa9.67□□□□□ -0.86
CLSTN1-203ENST00000435891 MED18Q9BUE0 208 aa9.67□□□□□ -0.86
CLSTN1-203ENST00000435891 TMEM168Q9H0V1 697 aa9.67□□□□□ -0.86
CLSTN1-203ENST00000435891 UBQLN3Q9H347 655 aa9.67□□□□□ -0.86
CLSTN1-203ENST00000435891 ADAP2Q9NPF8 381 aa9.67□□□□□ -0.86
CLSTN1-203ENST00000435891 SYNDIG1LA6NDD5 238 aa9.67□□□□□ -0.86
CLSTN1-203ENST00000435891 SPTBP11277 2137 aa9.67□□□□□ -0.86
CLSTN1-203ENST00000435891 MAKP20794 623 aa9.67□□□□□ -0.86
CLSTN1-203ENST00000435891 BLVRAP53004 296 aa9.67□□□□□ -0.86
CLSTN1-203ENST00000435891 TNFRSF17Q02223 184 aa9.67□□□□□ -0.86
CLSTN1-203ENST00000435891 ASAH1Q13510 395 aa9.67□□□□□ -0.86
CLSTN1-203ENST00000435891 KLHL12Q53G59 568 aa9.67□□□□□ -0.86
CLSTN1-203ENST00000435891 FCRLBQ6BAA4 426 aa9.67□□□□□ -0.86
CLSTN1-203ENST00000435891 NEIL3Q8TAT5 605 aa9.67□□□□□ -0.86
CLSTN1-203ENST00000435891 PATE1Q8WXA2 126 aa9.67□□□□□ -0.86
CLSTN1-203ENST00000435891 OSTF1Q92882 214 aa9.67□□□□□ -0.86
CLSTN1-203ENST00000435891 MS4A4EQ96PG1 132 aa9.67□□□□□ -0.86
CLSTN1-203ENST00000435891 OR2A5Q96R48 311 aa9.67□□□□□ -0.86
CLSTN1-203ENST00000435891 SDF2Q99470 211 aa9.67□□□□□ -0.86
CLSTN1-203ENST00000435891 ATF6BQ99941 703 aa9.67□□□□□ -0.86
CLSTN1-203ENST00000435891 RNF32Q9H0A6 362 aa9.67□□□□□ -0.86
CLSTN1-203ENST00000435891 KLHL28Q9NXS3 571 aa9.67□□□□□ -0.86
CLSTN1-203ENST00000435891 TRDV1A0A1B0GX56 115 aa9.67□□□□□ -0.86
CLSTN1-203ENST00000435891 ATP6V1E1P36543 226 aa9.67□□□□□ -0.86
CLSTN1-203ENST00000435891 STAT5AP42229 794 aa9.67□□□□□ -0.86
CLSTN1-203ENST00000435891 GPR85P60893 370 aa9.67□□□□□ -0.86
CLSTN1-203ENST00000435891 PLAURQ03405 335 aa9.67□□□□□ -0.86
CLSTN1-203ENST00000435891 OR2L13Q8N349 312 aa9.67□□□□□ -0.86
CLSTN1-203ENST00000435891 OR5T3Q8NGG3 340 aa9.67□□□□□ -0.86
CLSTN1-203ENST00000435891 LHFPL5Q8TAF8 219 aa9.67□□□□□ -0.86
CLSTN1-203ENST00000435891 MARC2Q969Z3 335 aa9.67□□□□□ -0.86
CLSTN1-203ENST00000435891 OR2M4Q96R27 311 aa9.67□□□□□ -0.86
CLSTN1-203ENST00000435891 TRAF4Q9BUZ4 470 aaPredicted RBP9.67□□□□□ -0.86
CLSTN1-203ENST00000435891 SLC22A4Q9H015 551 aa9.67□□□□□ -0.86
CLSTN1-203ENST00000435891 PPP1R3EQ9H7J1 279 aa9.67□□□□□ -0.86
CLSTN1-203ENST00000435891 OBP2AQ9NY56 170 aa9.67□□□□□ -0.86
CLSTN1-203ENST00000435891 OR6C2Q9NZP2 312 aa9.67□□□□□ -0.86
CLSTN1-203ENST00000435891 TOR1AO14656 332 aa9.66□□□□□ -0.86
CLSTN1-203ENST00000435891 IGHA1P01876 353 aa9.66□□□□□ -0.86
CLSTN1-203ENST00000435891 PVRP15151 417 aa9.66□□□□□ -0.86
CLSTN1-203ENST00000435891 NDUFV2P19404 249 aa9.66□□□□□ -0.86
CLSTN1-203ENST00000435891 PBX2P40425 430 aa9.66□□□□□ -0.86
CLSTN1-203ENST00000435891 TSFMP43897 325 aaKnown RBP9.66□□□□□ -0.86
CLSTN1-203ENST00000435891 EEF1A1P68104 462 aaKnown RBP9.66□□□□□ -0.86
CLSTN1-203ENST00000435891 FGFBP1Q14512 234 aa9.66□□□□□ -0.86
CLSTN1-203ENST00000435891 C9orf50Q5SZB4 431 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms