RNA–Protein interactions for RNA: ENST00000428982.4

SYNGAP1-203, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,339 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-203ENST00000428982 PPP2R1BP30154 601 aa13.52□□□□□ -0.24
SYNGAP1-203ENST00000428982 CCR7P32248 378 aa13.52□□□□□ -0.24
SYNGAP1-203ENST00000428982 ST3GAL2Q16842 350 aa13.52□□□□□ -0.24
SYNGAP1-203ENST00000428982 LBHQ53QV2 105 aaPredicted RBP13.52□□□□□ -0.24
SYNGAP1-203ENST00000428982 PLEKHS1Q5SXH7 462 aa13.52□□□□□ -0.24
SYNGAP1-203ENST00000428982 LRIF1Q5T3J3 769 aa13.52□□□□□ -0.24
SYNGAP1-203ENST00000428982 ATXN7L2Q5T6C5 722 aaPredicted RBP13.52□□□□□ -0.24
SYNGAP1-203ENST00000428982 CYHR1Q6ZMK1 362 aa13.52□□□□□ -0.24
SYNGAP1-203ENST00000428982 REC114Q7Z4M0 266 aa13.52□□□□□ -0.24
SYNGAP1-203ENST00000428982 TCEANCQ8N8B7 351 aa13.52□□□□□ -0.24
SYNGAP1-203ENST00000428982 AQP11Q8NBQ7 271 aa13.52□□□□□ -0.24
SYNGAP1-203ENST00000428982 IRF7Q92985 503 aa13.52□□□□□ -0.24
SYNGAP1-203ENST00000428982 ACSS1Q9NUB1 689 aaPredicted RBP13.52□□□□□ -0.24
SYNGAP1-203ENST00000428982 H7C1Q1 480 aa13.52□□□□□ -0.25
SYNGAP1-203ENST00000428982 IFNW1P05000 195 aa13.52□□□□□ -0.25
SYNGAP1-203ENST00000428982 AGTR1P30556 359 aa13.52□□□□□ -0.25
SYNGAP1-203ENST00000428982 PLA2G7Q13093 441 aa13.52□□□□□ -0.25
SYNGAP1-203ENST00000428982 GGTA1PQ4G0N0 100 aa13.52□□□□□ -0.25
SYNGAP1-203ENST00000428982 LRRC28Q86X40 367 aaPredicted RBP13.52□□□□□ -0.25
SYNGAP1-203ENST00000428982 LDLRAD3Q86YD5 345 aa13.52□□□□□ -0.25
SYNGAP1-203ENST00000428982 SPSB2Q99619 263 aa13.52□□□□□ -0.25
SYNGAP1-203ENST00000428982 C19orf43Q9BQ61 176 aa13.52□□□□□ -0.25
SYNGAP1-203ENST00000428982 DOHHQ9BU89 302 aa13.52□□□□□ -0.25
SYNGAP1-203ENST00000428982 ADAT1Q9BUB4 502 aaKnown RBP13.52□□□□□ -0.25
SYNGAP1-203ENST00000428982 FBXO10Q9UK96 956 aa13.52□□□□□ -0.25
SYNGAP1-203ENST00000428982 CDV3Q9UKY7 258 aaKnown RBP13.52□□□□□ -0.25
SYNGAP1-203ENST00000428982 SHROOM3Q8TF72 1996 aa13.52□□□□□ -0.25
SYNGAP1-203ENST00000428982 MYO7AQ13402 2215 aa13.52□□□□□ -0.25
SYNGAP1-203ENST00000428982 ADAM10O14672 748 aa13.52□□□□□ -0.25
SYNGAP1-203ENST00000428982 IFNGR2P38484 337 aa13.52□□□□□ -0.25
SYNGAP1-203ENST00000428982 DLX5P56178 289 aa13.52□□□□□ -0.25
SYNGAP1-203ENST00000428982 NTHL1P78549 312 aa13.52□□□□□ -0.25
SYNGAP1-203ENST00000428982 VLDLRP98155 873 aa13.52□□□□□ -0.25
SYNGAP1-203ENST00000428982 OC90Q02509 493 aaPredicted RBP13.52□□□□□ -0.25
SYNGAP1-203ENST00000428982 SKP2Q13309 424 aa13.52□□□□□ -0.25
SYNGAP1-203ENST00000428982 EIF4EBP2Q13542 120 aaPredicted RBP13.52□□□□□ -0.25
SYNGAP1-203ENST00000428982 AKR1C8PQ5T2L2 129 aa13.52□□□□□ -0.25
SYNGAP1-203ENST00000428982 B3GNTL1Q67FW5 361 aaPredicted RBP13.52□□□□□ -0.25
SYNGAP1-203ENST00000428982 ZNF689Q96CS4 500 aaPredicted RBP13.52□□□□□ -0.25
SYNGAP1-203ENST00000428982 B3GAT2Q9NPZ5 323 aa13.52□□□□□ -0.25
SYNGAP1-203ENST00000428982 HCFC1R1Q9NWW0 138 aa13.52□□□□□ -0.25
SYNGAP1-203ENST00000428982 PIAS3Q9Y6X2 628 aa13.52□□□□□ -0.25
SYNGAP1-203ENST00000428982 C7orf66A4D0T2 115 aa13.51□□□□□ -0.25
SYNGAP1-203ENST00000428982 F5H5P2 479 aa13.51□□□□□ -0.25
SYNGAP1-203ENST00000428982 IMPA2O14732 288 aa13.51□□□□□ -0.25
SYNGAP1-203ENST00000428982 VNN2O95498 520 aa13.51□□□□□ -0.25
SYNGAP1-203ENST00000428982 AHCYP23526 432 aa13.51□□□□□ -0.25
SYNGAP1-203ENST00000428982 GKP32189 559 aa13.51□□□□□ -0.25
SYNGAP1-203ENST00000428982 CDKN1CP49918 316 aaPredicted RBP13.51□□□□□ -0.25
SYNGAP1-203ENST00000428982 ZNF155Q12901 538 aaPredicted RBP13.51□□□□□ -0.25
SYNGAP1-203ENST00000428982 ATXN7L3Q14CW9 347 aaPredicted RBP13.51□□□□□ -0.25
SYNGAP1-203ENST00000428982 PDGFRLQ15198 375 aa13.51□□□□□ -0.25
SYNGAP1-203ENST00000428982 C18orf63Q68DL7 685 aa13.51□□□□□ -0.25
SYNGAP1-203ENST00000428982 UQCC3Q6UW78 93 aa13.51□□□□□ -0.25
SYNGAP1-203ENST00000428982 CARFQ8N187 725 aa13.51□□□□□ -0.25
SYNGAP1-203ENST00000428982 OR5M9Q8NGP3 310 aa13.51□□□□□ -0.25
SYNGAP1-203ENST00000428982 PRR14Q9BWN1 585 aa13.51□□□□□ -0.25
SYNGAP1-203ENST00000428982 NDUFB11Q9NX14 153 aa13.51□□□□□ -0.25
SYNGAP1-203ENST00000428982 HCFC2Q9Y5Z7 792 aa13.51□□□□□ -0.25
SYNGAP1-203ENST00000428982 MCIDASD6RGH6 385 aa13.51□□□□□ -0.25
SYNGAP1-203ENST00000428982 ZNF25P17030 456 aaPredicted RBP13.51□□□□□ -0.25
SYNGAP1-203ENST00000428982 CNR1P21554 472 aa13.51□□□□□ -0.25
SYNGAP1-203ENST00000428982 CPT2P23786 658 aa13.51□□□□□ -0.25
SYNGAP1-203ENST00000428982 MNDAP41218 407 aa13.51□□□□□ -0.25
SYNGAP1-203ENST00000428982 OR2B8PP59922 312 aa13.51□□□□□ -0.25
SYNGAP1-203ENST00000428982 GINS1Q14691 196 aa13.51□□□□□ -0.25
SYNGAP1-203ENST00000428982 FAM46CQ5VWP2 391 aa13.51□□□□□ -0.25
SYNGAP1-203ENST00000428982 TPRG1Q6ZUI0 275 aa13.51□□□□□ -0.25
SYNGAP1-203ENST00000428982 CACUL1Q86Y37 369 aa13.51□□□□□ -0.25
SYNGAP1-203ENST00000428982 SIAH3Q8IW03 269 aa13.51□□□□□ -0.25
SYNGAP1-203ENST00000428982 SYT14Q8NB59 555 aa13.51□□□□□ -0.25
SYNGAP1-203ENST00000428982 OR1J4Q8NGS1 313 aa13.51□□□□□ -0.25
SYNGAP1-203ENST00000428982 ZNF559Q9BR84 538 aa13.51□□□□□ -0.25
SYNGAP1-203ENST00000428982 PDFQ9HBH1 243 aa13.51□□□□□ -0.25
SYNGAP1-203ENST00000428982 GAR1Q9NY12 217 aaKnown RBP13.51□□□□□ -0.25
SYNGAP1-203ENST00000428982 RNF215Q9Y6U7 377 aa13.51□□□□□ -0.25
SYNGAP1-203ENST00000428982 MCRIP1C9JLW8 97 aa13.51□□□□□ -0.25
SYNGAP1-203ENST00000428982 UGDHO60701 494 aa13.51□□□□□ -0.25
SYNGAP1-203ENST00000428982 MED6O75586 246 aa13.51□□□□□ -0.25
SYNGAP1-203ENST00000428982 IGHV2-70P01814 119 aa13.51□□□□□ -0.25
SYNGAP1-203ENST00000428982 GKN3PP0CG01 181 aa13.51□□□□□ -0.25
SYNGAP1-203ENST00000428982 PBLDP30039 288 aaPredicted RBP13.51□□□□□ -0.25
SYNGAP1-203ENST00000428982 FAUP35544 74 aaKnown RBP13.51□□□□□ -0.25
SYNGAP1-203ENST00000428982 GLO1Q04760 184 aa13.51□□□□□ -0.25
SYNGAP1-203ENST00000428982 SHHQ15465 462 aa13.51□□□□□ -0.25
SYNGAP1-203ENST00000428982 ZNF528Q3MIS6 628 aa13.51□□□□□ -0.25
SYNGAP1-203ENST00000428982 POM121L1PQ3SYA9 428 aa13.51□□□□□ -0.25
SYNGAP1-203ENST00000428982 MED27Q6P2C8 311 aa13.51□□□□□ -0.25
SYNGAP1-203ENST00000428982 HTR3DQ70Z44 454 aa13.51□□□□□ -0.25
SYNGAP1-203ENST00000428982 CBLL1Q75N03 491 aa13.51□□□□□ -0.25
SYNGAP1-203ENST00000428982 NPAS3Q8IXF0 933 aa13.51□□□□□ -0.25
SYNGAP1-203ENST00000428982 CXorf40BQ96DE9 158 aa13.51□□□□□ -0.25
SYNGAP1-203ENST00000428982 EBPLQ9BY08 206 aa13.51□□□□□ -0.25
SYNGAP1-203ENST00000428982 SPHK2Q9NRA0 654 aa13.51□□□□□ -0.25
SYNGAP1-203ENST00000428982 EPHA6Q9UF33 1036 aa13.51□□□□□ -0.25
SYNGAP1-203ENST00000428982 RALGAPA2Q2PPJ7 1873 aa13.51□□□□□ -0.25
SYNGAP1-203ENST00000428982 CD8B2A6NJW9 211 aa13.5□□□□□ -0.25
SYNGAP1-203ENST00000428982 TLX2O43763 284 aaPredicted RBP13.5□□□□□ -0.25
SYNGAP1-203ENST00000428982 IGLV3-27P01718 113 aa13.5□□□□□ -0.25
SYNGAP1-203ENST00000428982 SULT1A3P0DMM9 295 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms